RNA–Protein interactions for RNA: ENST00000252456.6

CNN1-201, Transcript of calponin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNN1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-201ENST00000252456 TRPM1Q7Z4N2 1603 aa20.58■□□□□ 0.89
CNN1-201ENST00000252456 PHLPP1O60346 1717 aa20.56■□□□□ 0.88
CNN1-201ENST00000252456 AHDC1Q5TGY3 1603 aaPredicted RBP20.56■□□□□ 0.88
CNN1-201ENST00000252456 FMN2Q9NZ56 1722 aa20.56■□□□□ 0.88
CNN1-201ENST00000252456 C1orf167Q5SNV9 1468 aa20.56■□□□□ 0.88
CNN1-201ENST00000252456 BRINP3Q76B58 766 aa20.56■□□□□ 0.88
CNN1-201ENST00000252456 COL16A1Q07092 1604 aaPredicted RBP20.56■□□□□ 0.88
CNN1-201ENST00000252456 NHSL1Q5SYE7 1610 aa20.55■□□□□ 0.88
CNN1-201ENST00000252456 PRAM1Q96QH2 718 aa20.55■□□□□ 0.88
CNN1-201ENST00000252456 NBPF1Q3BBV0 1214 aa20.54■□□□□ 0.88
CNN1-201ENST00000252456 TRAK1Q9UPV9 953 aa20.54■□□□□ 0.88
CNN1-201ENST00000252456 ADGRB2O60241 1585 aa20.53■□□□□ 0.88
CNN1-201ENST00000252456 SAFB2Q14151 953 aaKnown RBP eCLIP20.5■□□□□ 0.87
CNN1-201ENST00000252456 TONSLQ96HA7 1378 aa20.5■□□□□ 0.87
CNN1-201ENST00000252456 NBPF8Q3BBV2 869 aa20.49■□□□□ 0.87
CNN1-201ENST00000252456 RGPD8O14715 1765 aaPredicted RBP20.49■□□□□ 0.87
CNN1-201ENST00000252456 POGKQ9P215 609 aa20.48■□□□□ 0.87
CNN1-201ENST00000252456 USP32Q8NFA0 1604 aa20.48■□□□□ 0.87
CNN1-201ENST00000252456 ORAI2Q96SN7 254 aa20.47■□□□□ 0.87
CNN1-201ENST00000252456 MED1Q15648 1581 aaPredicted RBP20.45■□□□□ 0.86
CNN1-201ENST00000252456 CLSPNQ9HAW4 1339 aa20.45■□□□□ 0.86
CNN1-201ENST00000252456 NUTM2FA1L443 756 aa20.44■□□□□ 0.86
CNN1-201ENST00000252456 DDX17Q92841 729 aaKnown RBP20.44■□□□□ 0.86
CNN1-201ENST00000252456 MINK1Q8N4C8 1332 aaPredicted RBP20.43■□□□□ 0.86
CNN1-201ENST00000252456 GPRASP1Q5JY77 1395 aa20.43■□□□□ 0.86
CNN1-201ENST00000252456 SHPRHQ149N8 1683 aa20.43■□□□□ 0.86
CNN1-201ENST00000252456 HIRIP3Q9BW71 556 aaPredicted RBP20.42■□□□□ 0.86
CNN1-201ENST00000252456 RALGAPBQ86X10 1494 aa20.42■□□□□ 0.86
CNN1-201ENST00000252456 ROCK2O75116 1388 aaKnown RBP20.42■□□□□ 0.86
CNN1-201ENST00000252456 KIF1AQ12756 1690 aa20.41■□□□□ 0.86
CNN1-201ENST00000252456 QRICH2Q9H0J4 1663 aa20.41■□□□□ 0.86
CNN1-201ENST00000252456 JCADQ9P266 1359 aa20.4■□□□□ 0.86
CNN1-201ENST00000252456 ESCO1Q5FWF5 840 aa20.4■□□□□ 0.86
CNN1-201ENST00000252456 TULP4Q9NRJ4 1543 aa20.39■□□□□ 0.86
CNN1-201ENST00000252456 ANKARQ7Z5J8 1434 aa20.39■□□□□ 0.86
CNN1-201ENST00000252456 PXDNQ92626 1479 aa20.38■□□□□ 0.85
CNN1-201ENST00000252456 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
CNN1-201ENST00000252456 PRR36Q9H6K5 1346 aa20.38■□□□□ 0.85
CNN1-201ENST00000252456 WASLO00401 505 aaPredicted RBP20.38■□□□□ 0.85
CNN1-201ENST00000252456 CENPJQ9HC77 1338 aaPredicted RBP20.36■□□□□ 0.85
CNN1-201ENST00000252456 ATP7BP35670 1465 aa20.36■□□□□ 0.85
CNN1-201ENST00000252456 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
CNN1-201ENST00000252456 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
CNN1-201ENST00000252456 FOXO3O43524 673 aa20.34■□□□□ 0.85
CNN1-201ENST00000252456 EIF3AQ14152 1382 aaKnown RBP20.34■□□□□ 0.85
CNN1-201ENST00000252456 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
CNN1-201ENST00000252456 LRP6O75581 1613 aa20.33■□□□□ 0.85
CNN1-201ENST00000252456 NPHP3Q7Z494 1330 aa20.33■□□□□ 0.85
CNN1-201ENST00000252456 CCER1Q8TC90 406 aaPredicted RBP20.33■□□□□ 0.84
CNN1-201ENST00000252456 PNPLA6Q8IY17 1366 aa20.32■□□□□ 0.84
CNN1-201ENST00000252456 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
CNN1-201ENST00000252456 PHF8Q9UPP1 1060 aa20.31■□□□□ 0.84
CNN1-201ENST00000252456 TIMELESSQ9UNS1 1208 aa20.31■□□□□ 0.84
CNN1-201ENST00000252456 XPCQ01831 940 aaPredicted RBP20.3■□□□□ 0.84
CNN1-201ENST00000252456 CDK19Q9BWU1 502 aa20.3■□□□□ 0.84
CNN1-201ENST00000252456 CARD11Q9BXL7 1154 aa20.3■□□□□ 0.84
CNN1-201ENST00000252456 COL22A1Q8NFW1 1626 aaPredicted RBP20.3■□□□□ 0.84
CNN1-201ENST00000252456 SPATA31A6Q5VVP1 1343 aa20.29■□□□□ 0.84
CNN1-201ENST00000252456 NUDT16Q96DE0 195 aaKnown RBP20.27■□□□□ 0.84
CNN1-201ENST00000252456 TRPM3Q9HCF6 1732 aaPredicted RBP20.27■□□□□ 0.84
CNN1-201ENST00000252456 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.83
CNN1-201ENST00000252456 SBNO2Q9Y2G9 1366 aa20.26■□□□□ 0.83
CNN1-201ENST00000252456 KRT28Q7Z3Y7 464 aa20.24■□□□□ 0.83
CNN1-201ENST00000252456 SPATA31A3Q5VYP0 1347 aa20.23■□□□□ 0.83
CNN1-201ENST00000252456 ALS2Q96Q42 1657 aa20.22■□□□□ 0.83
CNN1-201ENST00000252456 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
CNN1-201ENST00000252456 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
CNN1-201ENST00000252456 TNS3Q68CZ2 1445 aa20.22■□□□□ 0.83
CNN1-201ENST00000252456 CCDC61Q9Y6R9 512 aa20.21■□□□□ 0.83
CNN1-201ENST00000252456 SBNO1A3KN83 1393 aa20.2■□□□□ 0.82
CNN1-201ENST00000252456 POLR3AO14802 1390 aaPredicted RBP20.2■□□□□ 0.82
CNN1-201ENST00000252456 SRPK2P78362 688 aaKnown RBP20.2■□□□□ 0.82
CNN1-201ENST00000252456 EVC2Q86UK5 1308 aa20.2■□□□□ 0.82
CNN1-201ENST00000252456 ABCA3Q99758 1704 aa20.19■□□□□ 0.82
CNN1-201ENST00000252456 PPIP5K1Q6PFW1 1433 aa20.19■□□□□ 0.82
CNN1-201ENST00000252456 NUTM2BA6NNL0 878 aaPredicted RBP20.19■□□□□ 0.82
CNN1-201ENST00000252456 NUTM2EB1AL46 878 aaPredicted RBP20.19■□□□□ 0.82
CNN1-201ENST00000252456 PSME1Q06323 249 aa20.19■□□□□ 0.82
CNN1-201ENST00000252456 NUTM2AQ8IVF1 878 aaPredicted RBP20.19■□□□□ 0.82
CNN1-201ENST00000252456 PLEKHG3A1L390 1219 aa20.18■□□□□ 0.82
CNN1-201ENST00000252456 PHF23Q9BUL5 403 aaPredicted RBP20.18■□□□□ 0.82
CNN1-201ENST00000252456 MARF1Q9Y4F3 1742 aaKnown RBP20.18■□□□□ 0.82
CNN1-201ENST00000252456 ILDR2Q71H61 639 aa20.17■□□□□ 0.82
CNN1-201ENST00000252456 NGDNQ8NEJ9 315 aaKnown RBP20.17■□□□□ 0.82
CNN1-201ENST00000252456 USP47Q96K76 1375 aa20.17■□□□□ 0.82
CNN1-201ENST00000252456 TESK2Q96S53 571 aa20.16■□□□□ 0.82
CNN1-201ENST00000252456 ACEP12821 1306 aa20.16■□□□□ 0.82
CNN1-201ENST00000252456 CRYBG1Q9Y4K1 1723 aa20.16■□□□□ 0.82
CNN1-201ENST00000252456 ST20-MTHFSA0A0A6YYL1 179 aa20.15■□□□□ 0.82
CNN1-201ENST00000252456 AKAP12Q02952 1782 aa20.13■□□□□ 0.81
CNN1-201ENST00000252456 ARHGEF10O15013 1369 aa20.13■□□□□ 0.81
CNN1-201ENST00000252456 MEX3CQ5U5Q3 659 aaKnown RBP20.13■□□□□ 0.81
CNN1-201ENST00000252456 CABP1Q9NZU7 370 aa20.13■□□□□ 0.81
CNN1-201ENST00000252456 ADAMTS2O95450 1211 aa20.11■□□□□ 0.81
CNN1-201ENST00000252456 ATAD2Q6PL18 1390 aa20.11■□□□□ 0.81
CNN1-201ENST00000252456 POTEAQ6S8J7 498 aa20.09■□□□□ 0.81
CNN1-201ENST00000252456 CABLES1Q8TDN4 633 aa20.09■□□□□ 0.81
CNN1-201ENST00000252456 USP6P35125 1406 aa20.08■□□□□ 0.81
CNN1-201ENST00000252456 NRKQ7Z2Y5 1582 aa20.08■□□□□ 0.81
CNN1-201ENST00000252456 LMOD2Q6P5Q4 547 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms