RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 OSCARQ8IYS5 282 aa33.21■■■□□ 2.91
RAB40C-201ENST00000248139 FRAT1Q92837 279 aaPredicted RBP33.21■■■□□ 2.91
RAB40C-201ENST00000248139 TCP11L2Q8N4U5 519 aa33.2■■■□□ 2.91
RAB40C-201ENST00000248139 IGHDP01880 384 aa33.2■■■□□ 2.9
RAB40C-201ENST00000248139 COG6Q9Y2V7 657 aa33.19■■■□□ 2.9
RAB40C-201ENST00000248139 ADGRB1O14514 1584 aa33.19■■■□□ 2.9
RAB40C-201ENST00000248139 MYO3AQ8NEV4 1616 aa33.19■■■□□ 2.9
RAB40C-201ENST00000248139 CANXP27824 592 aaKnown RBP33.18■■■□□ 2.9
RAB40C-201ENST00000248139 QRICH2Q9H0J4 1663 aa33.18■■■□□ 2.9
RAB40C-201ENST00000248139 BCL2L13Q9BXK5 485 aa33.18■■■□□ 2.9
RAB40C-201ENST00000248139 PPLO60437 1756 aa33.17■■■□□ 2.9
RAB40C-201ENST00000248139 C8orf34Q49A92 452 aa33.16■■■□□ 2.9
RAB40C-201ENST00000248139 TNNQ9UQP3 1299 aa33.16■■■□□ 2.9
RAB40C-201ENST00000248139 MLH3Q9UHC1 1453 aa33.15■■■□□ 2.9
RAB40C-201ENST00000248139 SETBP1Q9Y6X0 1596 aa33.14■■■□□ 2.9
RAB40C-201ENST00000248139 ABCC3O15438 1527 aa33.14■■■□□ 2.9
RAB40C-201ENST00000248139 IDI1Q13907 227 aa33.14■■■□□ 2.9
RAB40C-201ENST00000248139 RUNDC1Q96C34 613 aa33.13■■■□□ 2.89
RAB40C-201ENST00000248139 NEFMP07197 916 aa33.13■■■□□ 2.89
RAB40C-201ENST00000248139 HECW2Q9P2P5 1572 aa33.12■■■□□ 2.89
RAB40C-201ENST00000248139 CGNL1Q0VF96 1302 aa33.11■■■□□ 2.89
RAB40C-201ENST00000248139 FAM161AQ3B820 660 aa33.11■■■□□ 2.89
RAB40C-201ENST00000248139 SIGLEC1Q9BZZ2 1709 aa33.11■■■□□ 2.89
RAB40C-201ENST00000248139 SHPRHQ149N8 1683 aa33.09■■■□□ 2.89
RAB40C-201ENST00000248139 VGFO15240 615 aaPredicted RBP33.08■■■□□ 2.89
RAB40C-201ENST00000248139 RPGRIP1LQ68CZ1 1315 aa33.08■■■□□ 2.89
RAB40C-201ENST00000248139 EVC2Q86UK5 1308 aa33.08■■■□□ 2.89
RAB40C-201ENST00000248139 U2AF1L5P0DN76 240 aaPredicted RBP33.07■■■□□ 2.89
RAB40C-201ENST00000248139 U2AF1Q01081 240 aaKnown RBP eCLIP33.07■■■□□ 2.89
RAB40C-201ENST00000248139 ZC3H13Q5T200 1668 aaKnown RBP33.07■■■□□ 2.88
RAB40C-201ENST00000248139 CLUAP1Q96AJ1 413 aa33.05■■■□□ 2.88
RAB40C-201ENST00000248139 GLI2P10070 1586 aa33.04■■■□□ 2.88
RAB40C-201ENST00000248139 RARSP54136 660 aaKnown RBP33.04■■■□□ 2.88
RAB40C-201ENST00000248139 SRPK2P78362 688 aaKnown RBP33.04■■■□□ 2.88
RAB40C-201ENST00000248139 GGNBP2Q9H3C7 697 aa33.04■■■□□ 2.88
RAB40C-201ENST00000248139 RLBP1P12271 317 aa33.03■■■□□ 2.88
RAB40C-201ENST00000248139 TULP4Q9NRJ4 1543 aa33.02■■■□□ 2.88
RAB40C-201ENST00000248139 CFAP53Q96M91 514 aa33.02■■■□□ 2.88
RAB40C-201ENST00000248139 CAMSAP1Q5T5Y3 1602 aa33.01■■■□□ 2.87
RAB40C-201ENST00000248139 PDE3AQ14432 1141 aa33.01■■■□□ 2.87
RAB40C-201ENST00000248139 NGEFQ8N5V2 710 aa33.01■■■□□ 2.87
RAB40C-201ENST00000248139 MINK1Q8N4C8 1332 aaPredicted RBP33■■■□□ 2.87
RAB40C-201ENST00000248139 DDRGK1Q96HY6 314 aa33■■■□□ 2.87
RAB40C-201ENST00000248139 U2SURPO15042 1029 aaKnown RBP32.98■■■□□ 2.87
RAB40C-201ENST00000248139 YEATS2Q9ULM3 1422 aa32.97■■■□□ 2.87
RAB40C-201ENST00000248139 NEXMIFQ5QGS0 1516 aa32.97■■■□□ 2.87
RAB40C-201ENST00000248139 ANKRD36BQ8N2N9 1353 aa32.97■■■□□ 2.87
RAB40C-201ENST00000248139 FBXO31Q5XUX0 539 aaPredicted RBP32.96■■■□□ 2.87
RAB40C-201ENST00000248139 PHF23Q9BUL5 403 aaPredicted RBP32.96■■■□□ 2.87
RAB40C-201ENST00000248139 CFAP74Q9C0B2 1584 aa32.96■■■□□ 2.87
RAB40C-201ENST00000248139 TSR2Q969E8 191 aaKnown RBP32.95■■■□□ 2.87
RAB40C-201ENST00000248139 IQSEC2Q5JU85 1478 aa32.95■■■□□ 2.87
RAB40C-201ENST00000248139 A0A1W2PP64 1363 aa32.94■■■□□ 2.86
RAB40C-201ENST00000248139 PCDHB15Q9Y5E8 787 aa32.94■■■□□ 2.86
RAB40C-201ENST00000248139 ARHGEF28Q8N1W1 1705 aaKnown RBP32.93■■■□□ 2.86
RAB40C-201ENST00000248139 PRAM1Q96QH2 718 aa32.93■■■□□ 2.86
RAB40C-201ENST00000248139 WDR63Q8IWG1 891 aa32.92■■■□□ 2.86
RAB40C-201ENST00000248139 DAXXQ9UER7 740 aaPredicted RBP32.92■■■□□ 2.86
RAB40C-201ENST00000248139 SEC24BO95487 1268 aa32.91■■■□□ 2.86
RAB40C-201ENST00000248139 DIP2CQ9Y2E4 1556 aa32.91■■■□□ 2.86
RAB40C-201ENST00000248139 POGKQ9P215 609 aa32.88■■■□□ 2.85
RAB40C-201ENST00000248139 PPM1GO15355 546 aaPredicted RBP32.88■■■□□ 2.85
RAB40C-201ENST00000248139 FBLN1P23142 703 aa32.87■■■□□ 2.85
RAB40C-201ENST00000248139 PIK3C2BO00750 1634 aa32.87■■■□□ 2.85
RAB40C-201ENST00000248139 MYO5BQ9ULV0 1848 aa32.85■■■□□ 2.85
RAB40C-201ENST00000248139 FYB1O15117 783 aa32.84■■■□□ 2.85
RAB40C-201ENST00000248139 SLC52A1Q9NWF4 448 aa32.83■■■□□ 2.85
RAB40C-201ENST00000248139 NEO1Q92859 1461 aa32.83■■■□□ 2.85
RAB40C-201ENST00000248139 CCDC27Q2M243 656 aa32.82■■■□□ 2.84
RAB40C-201ENST00000248139 MYH16Q9H6N6 1097 aa32.81■■■□□ 2.84
RAB40C-201ENST00000248139 NFKBIBQ15653 356 aa32.81■■■□□ 2.84
RAB40C-201ENST00000248139 USP32Q8NFA0 1604 aa32.81■■■□□ 2.84
RAB40C-201ENST00000248139 CYB5RLQ6IPT4 315 aa32.8■■■□□ 2.84
RAB40C-201ENST00000248139 EXOSC9Q06265 439 aaKnown RBP32.8■■■□□ 2.84
RAB40C-201ENST00000248139 USP19O94966 1318 aa32.79■■■□□ 2.84
RAB40C-201ENST00000248139 PUS7Q96PZ0 661 aaKnown RBP32.79■■■□□ 2.84
RAB40C-201ENST00000248139 STAG3Q9UJ98 1225 aa32.78■■■□□ 2.84
RAB40C-201ENST00000248139 ABCC11Q96J66 1382 aa32.78■■■□□ 2.84
RAB40C-201ENST00000248139 NINLQ9Y2I6 1382 aa32.78■■■□□ 2.84
RAB40C-201ENST00000248139 PLEKHF1Q96S99 279 aa32.78■■■□□ 2.84
RAB40C-201ENST00000248139 TMPOP42166 694 aaKnown RBP32.77■■■□□ 2.84
RAB40C-201ENST00000248139 CABP1Q9NZU7 370 aa32.77■■■□□ 2.84
RAB40C-201ENST00000248139 TRIM35Q9UPQ4 493 aa32.77■■■□□ 2.84
RAB40C-201ENST00000248139 NSD2O96028 1365 aa32.77■■■□□ 2.84
RAB40C-201ENST00000248139 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.75■■■□□ 2.83
RAB40C-201ENST00000248139 CDK19Q9BWU1 502 aa32.75■■■□□ 2.83
RAB40C-201ENST00000248139 USP35Q9P2H5 1018 aa32.75■■■□□ 2.83
RAB40C-201ENST00000248139 PDZRN3Q9UPQ7 1066 aa32.75■■■□□ 2.83
RAB40C-201ENST00000248139 ARHGAP31Q2M1Z3 1444 aa32.75■■■□□ 2.83
RAB40C-201ENST00000248139 WAPLQ7Z5K2 1190 aa32.74■■■□□ 2.83
RAB40C-201ENST00000248139 SMC4Q9NTJ3 1288 aa32.74■■■□□ 2.83
RAB40C-201ENST00000248139 PTPRMP28827 1452 aa32.73■■■□□ 2.83
RAB40C-201ENST00000248139 TERF2IPQ9NYB0 399 aa32.73■■■□□ 2.83
RAB40C-201ENST00000248139 RICTORQ6R327 1708 aa32.73■■■□□ 2.83
RAB40C-201ENST00000248139 FTSJ3Q8IY81 847 aaKnown RBP32.73■■■□□ 2.83
RAB40C-201ENST00000248139 PMFBP1Q8TBY8 1022 aa32.73■■■□□ 2.83
RAB40C-201ENST00000248139 YTHDC2Q9H6S0 1430 aaKnown RBP32.72■■■□□ 2.83
RAB40C-201ENST00000248139 MAPK8IP3Q9UPT6 1336 aa32.72■■■□□ 2.83
RAB40C-201ENST00000248139 RIPK4P57078 832 aa32.7■■■□□ 2.82
RAB40C-201ENST00000248139 ZKSCAN2Q63HK3 967 aa32.7■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms