RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 GPRASP1Q5JY77 1395 aa19.66■□□□□ 0.74
SIN3B-201ENST00000248054 CDK11BP21127 795 aaKnown RBP19.65■□□□□ 0.74
SIN3B-201ENST00000248054 TEFQ10587 303 aa19.65■□□□□ 0.74
SIN3B-201ENST00000248054 GPATCH3Q96I76 525 aa19.65■□□□□ 0.74
SIN3B-201ENST00000248054 CT47B1P0C2W7 299 aaPredicted RBP19.64■□□□□ 0.73
SIN3B-201ENST00000248054 C14orf93Q9H972 538 aaKnown RBP19.64■□□□□ 0.73
SIN3B-201ENST00000248054 C11orf95C9JLR9 678 aaPredicted RBP19.64■□□□□ 0.73
SIN3B-201ENST00000248054 NINLQ9Y2I6 1382 aa19.64■□□□□ 0.73
SIN3B-201ENST00000248054 SLC4A10Q6U841 1118 aa19.63■□□□□ 0.73
SIN3B-201ENST00000248054 CABP1Q9NZU7 370 aa19.63■□□□□ 0.73
SIN3B-201ENST00000248054 FAM161AQ3B820 660 aa19.63■□□□□ 0.73
SIN3B-201ENST00000248054 COG6Q9Y2V7 657 aa19.63■□□□□ 0.73
SIN3B-201ENST00000248054 NOS1P29475 1434 aa19.63■□□□□ 0.73
SIN3B-201ENST00000248054 ADGRF5Q8IZF2 1346 aa19.63■□□□□ 0.73
SIN3B-201ENST00000248054 KIAA1211Q6ZU35 1233 aa19.63■□□□□ 0.73
SIN3B-201ENST00000248054 PRAG1Q86YV5 1406 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 NRDCO43847 1150 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 ATF3P18847 181 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 WDR63Q8IWG1 891 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 GCC2Q8IWJ2 1684 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 GBP4Q96PP9 640 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 BCL2L13Q9BXK5 485 aa19.62■□□□□ 0.73
SIN3B-201ENST00000248054 IDI1Q13907 227 aa19.61■□□□□ 0.73
SIN3B-201ENST00000248054 ANKLE2Q86XL3 938 aa19.61■□□□□ 0.73
SIN3B-201ENST00000248054 PZPP20742 1482 aa19.61■□□□□ 0.73
SIN3B-201ENST00000248054 ABCA8O94911 1581 aa19.61■□□□□ 0.73
SIN3B-201ENST00000248054 ARHGEF5Q12774 1597 aa19.61■□□□□ 0.73
SIN3B-201ENST00000248054 NSD2O96028 1365 aa19.6■□□□□ 0.73
SIN3B-201ENST00000248054 NLRP6P59044 892 aa19.6■□□□□ 0.73
SIN3B-201ENST00000248054 ADGBQ8N7X0 1667 aa19.6■□□□□ 0.73
SIN3B-201ENST00000248054 NPHP1O15259 732 aa19.59■□□□□ 0.73
SIN3B-201ENST00000248054 MAGI3Q5TCQ9 1506 aa19.59■□□□□ 0.73
SIN3B-201ENST00000248054 NFKBIBQ15653 356 aa19.59■□□□□ 0.73
SIN3B-201ENST00000248054 UHRF1BP1LA0JNW5 1464 aa19.59■□□□□ 0.73
SIN3B-201ENST00000248054 APBB1O00213 710 aa19.59■□□□□ 0.73
SIN3B-201ENST00000248054 GAS2L2Q8NHY3 880 aa19.59■□□□□ 0.73
SIN3B-201ENST00000248054 FGD1P98174 961 aa19.58■□□□□ 0.73
SIN3B-201ENST00000248054 ELL2O00472 640 aaPredicted RBP19.58■□□□□ 0.72
SIN3B-201ENST00000248054 CCDC61Q9Y6R9 512 aa19.58■□□□□ 0.72
SIN3B-201ENST00000248054 PDE3AQ14432 1141 aa19.57■□□□□ 0.72
SIN3B-201ENST00000248054 HMOX1P09601 288 aa19.57■□□□□ 0.72
SIN3B-201ENST00000248054 MSNP26038 577 aaKnown RBP19.57■□□□□ 0.72
SIN3B-201ENST00000248054 PODXL2Q9NZ53 605 aa19.55■□□□□ 0.72
SIN3B-201ENST00000248054 PRKAR2BP31323 418 aa19.54■□□□□ 0.72
SIN3B-201ENST00000248054 CHAF1AQ13111 956 aaPredicted RBP19.54■□□□□ 0.72
SIN3B-201ENST00000248054 GZF1Q9H116 711 aaPredicted RBP19.54■□□□□ 0.72
SIN3B-201ENST00000248054 CCDC184Q52MB2 194 aa19.54■□□□□ 0.72
SIN3B-201ENST00000248054 UHRF1BP1Q6BDS2 1440 aa19.54■□□□□ 0.72
SIN3B-201ENST00000248054 CDCA7LQ96GN5 454 aa19.54■□□□□ 0.72
SIN3B-201ENST00000248054 SLKQ9H2G2 1235 aaPredicted RBP19.54■□□□□ 0.72
SIN3B-201ENST00000248054 MAST1Q9Y2H9 1570 aa19.53■□□□□ 0.72
SIN3B-201ENST00000248054 TSPYL4Q9UJ04 414 aa19.53■□□□□ 0.72
SIN3B-201ENST00000248054 MFAP1P55081 439 aaKnown RBP19.53■□□□□ 0.72
SIN3B-201ENST00000248054 FCHSD2O94868 740 aa19.52■□□□□ 0.72
SIN3B-201ENST00000248054 ABTB2Q8N961 1025 aa19.52■□□□□ 0.72
SIN3B-201ENST00000248054 ATP7AQ04656 1500 aa19.52■□□□□ 0.72
SIN3B-201ENST00000248054 FAM43AQ8N2R8 423 aa19.52■□□□□ 0.72
SIN3B-201ENST00000248054 TTC5Q8N0Z6 440 aa19.52■□□□□ 0.72
SIN3B-201ENST00000248054 NUDT16Q96DE0 195 aaKnown RBP19.52■□□□□ 0.72
SIN3B-201ENST00000248054 PUS7Q96PZ0 661 aaKnown RBP19.52■□□□□ 0.71
SIN3B-201ENST00000248054 ZNF428Q96B54 188 aa19.51■□□□□ 0.71
SIN3B-201ENST00000248054 GOLGA6L3A6NEY3 463 aa19.51■□□□□ 0.71
SIN3B-201ENST00000248054 PROSER2Q86WR7 435 aaPredicted RBP19.51■□□□□ 0.71
SIN3B-201ENST00000248054 DDX58O95786 925 aaKnown RBP19.51■□□□□ 0.71
SIN3B-201ENST00000248054 RAPGEF4Q8WZA2 1011 aa19.51■□□□□ 0.71
SIN3B-201ENST00000248054 DISP3Q9P2K9 1392 aa19.5■□□□□ 0.71
SIN3B-201ENST00000248054 GOLGA6L4A6NEF3 574 aa19.5■□□□□ 0.71
SIN3B-201ENST00000248054 NEXNQ0ZGT2 675 aa19.5■□□□□ 0.71
SIN3B-201ENST00000248054 ANKRD45Q5TZF3 282 aa19.5■□□□□ 0.71
SIN3B-201ENST00000248054 EVA1CP58658 441 aa19.5■□□□□ 0.71
SIN3B-201ENST00000248054 FBXO31Q5XUX0 539 aaPredicted RBP19.49■□□□□ 0.71
SIN3B-201ENST00000248054 SLC26A8Q96RN1 970 aa19.48■□□□□ 0.71
SIN3B-201ENST00000248054 ESCO1Q5FWF5 840 aa19.48■□□□□ 0.71
SIN3B-201ENST00000248054 TRIM6-TRIM34B2RNG4 842 aa19.48■□□□□ 0.71
SIN3B-201ENST00000248054 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
SIN3B-201ENST00000248054 TNRQ92752 1358 aa19.47■□□□□ 0.71
SIN3B-201ENST00000248054 CFAP74Q9C0B2 1584 aa19.47■□□□□ 0.71
SIN3B-201ENST00000248054 ABCC11Q96J66 1382 aa19.47■□□□□ 0.71
SIN3B-201ENST00000248054 SPRYD3Q8NCJ5 442 aa19.46■□□□□ 0.71
SIN3B-201ENST00000248054 NEO1Q92859 1461 aa19.46■□□□□ 0.71
SIN3B-201ENST00000248054 SYAP1Q96A49 352 aaPredicted RBP19.46■□□□□ 0.71
SIN3B-201ENST00000248054 PLEKHO1Q53GL0 409 aaPredicted RBP19.46■□□□□ 0.71
SIN3B-201ENST00000248054 ARID3AQ99856 593 aa19.46■□□□□ 0.71
SIN3B-201ENST00000248054 ZNF330Q9Y3S2 320 aaPredicted RBP19.46■□□□□ 0.71
SIN3B-201ENST00000248054 WASLO00401 505 aaPredicted RBP19.45■□□□□ 0.7
SIN3B-201ENST00000248054 EXOSC9Q06265 439 aaKnown RBP19.45■□□□□ 0.7
SIN3B-201ENST00000248054 TAF7LQ5H9L4 462 aa19.45■□□□□ 0.7
SIN3B-201ENST00000248054 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.45■□□□□ 0.7
SIN3B-201ENST00000248054 CCDC9Q9Y3X0 531 aaKnown RBP19.45■□□□□ 0.7
SIN3B-201ENST00000248054 FKBP5Q13451 457 aaPredicted RBP19.44■□□□□ 0.7
SIN3B-201ENST00000248054 SLFN5Q08AF3 891 aa19.44■□□□□ 0.7
SIN3B-201ENST00000248054 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
SIN3B-201ENST00000248054 PLCB2Q00722 1185 aa19.43■□□□□ 0.7
SIN3B-201ENST00000248054 GORABQ5T7V8 394 aa19.43■□□□□ 0.7
SIN3B-201ENST00000248054 PANK1Q8TE04 598 aa19.43■□□□□ 0.7
SIN3B-201ENST00000248054 ST18O60284 1047 aa19.43■□□□□ 0.7
SIN3B-201ENST00000248054 ANKRD36BQ8N2N9 1353 aa19.43■□□□□ 0.7
SIN3B-201ENST00000248054 A0A0U1RQG5 324 aaPredicted RBP19.43■□□□□ 0.7
SIN3B-201ENST00000248054 CCDC30Q5VVM6 783 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms