RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 IL27Q8NEV9 243 aa16.12■□□□□ 0.17
RAB3IP-201ENST00000247833 INSRP06213 1382 aa16.12■□□□□ 0.17
RAB3IP-201ENST00000247833 ERVK-7P63135 1459 aa16.12■□□□□ 0.17
RAB3IP-201ENST00000247833 RARSP54136 660 aaKnown RBP16.12■□□□□ 0.17
RAB3IP-201ENST00000247833 BECN1Q14457 450 aa16.11■□□□□ 0.17
RAB3IP-201ENST00000247833 PMFBP1Q8TBY8 1022 aa16.11■□□□□ 0.17
RAB3IP-201ENST00000247833 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
RAB3IP-201ENST00000247833 OSCARQ8IYS5 282 aa16.1■□□□□ 0.17
RAB3IP-201ENST00000247833 FRAT2O75474 233 aaPredicted RBP16.09■□□□□ 0.17
RAB3IP-201ENST00000247833 RLBP1P12271 317 aa16.09■□□□□ 0.17
RAB3IP-201ENST00000247833 RWDD1Q9H446 243 aaPredicted RBP16.09■□□□□ 0.17
RAB3IP-201ENST00000247833 CD109Q6YHK3 1445 aa16.09■□□□□ 0.17
RAB3IP-201ENST00000247833 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
RAB3IP-201ENST00000247833 SYNMO15061 1565 aa16.08■□□□□ 0.16
RAB3IP-201ENST00000247833 EXOSC9Q06265 439 aaKnown RBP16.08■□□□□ 0.16
RAB3IP-201ENST00000247833 IDI1Q13907 227 aa16.08■□□□□ 0.16
RAB3IP-201ENST00000247833 PRAM1Q96QH2 718 aa16.08■□□□□ 0.16
RAB3IP-201ENST00000247833 LAMC1P11047 1609 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 TRMT2AQ8IZ69 625 aaKnown RBP16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 TERF2IPQ9NYB0 399 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 UHRF1BP1LA0JNW5 1464 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 ELL2O00472 640 aaPredicted RBP16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 GSE1Q14687 1217 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 PLPPR3Q6T4P5 718 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 PCDHB15Q9Y5E8 787 aa16.07■□□□□ 0.16
RAB3IP-201ENST00000247833 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 SEC24BO95487 1268 aa16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 FBLN1P23142 703 aa16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 RIPK4P57078 832 aa16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 HDGFL2Q7Z4V5 671 aaPredicted RBP16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 DZIP1LQ8IYY4 767 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 POLR3AO14802 1390 aaPredicted RBP16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 MFAP1P55081 439 aaKnown RBP16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
RAB3IP-201ENST00000247833 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
RAB3IP-201ENST00000247833 WDR63Q8IWG1 891 aa16.04■□□□□ 0.16
RAB3IP-201ENST00000247833 HMOX1P09601 288 aa16.03■□□□□ 0.16
RAB3IP-201ENST00000247833 NPATQ14207 1427 aa16.03■□□□□ 0.16
RAB3IP-201ENST00000247833 RNF17Q9BXT8 1623 aaKnown RBP16.02■□□□□ 0.16
RAB3IP-201ENST00000247833 TET3O43151 1660 aa16.02■□□□□ 0.16
RAB3IP-201ENST00000247833 FBXO31Q5XUX0 539 aaPredicted RBP16.02■□□□□ 0.16
RAB3IP-201ENST00000247833 CYB5RLQ6IPT4 315 aa16.02■□□□□ 0.16
RAB3IP-201ENST00000247833 BRPF3Q9ULD4 1205 aa16.02■□□□□ 0.16
RAB3IP-201ENST00000247833 ZNF518AQ6AHZ1 1483 aa16.02■□□□□ 0.16
RAB3IP-201ENST00000247833 DIAPH1O60610 1272 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-201ENST00000247833 CABP1Q9NZU7 370 aa16.01■□□□□ 0.15
RAB3IP-201ENST00000247833 SOX12O15370 315 aa16.01■□□□□ 0.15
RAB3IP-201ENST00000247833 RPGRIP1LQ68CZ1 1315 aa16.01■□□□□ 0.15
RAB3IP-201ENST00000247833 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
RAB3IP-201ENST00000247833 IQGAP1P46940 1657 aa16.01■□□□□ 0.15
RAB3IP-201ENST00000247833 TMPOP42166 694 aaKnown RBP16■□□□□ 0.15
RAB3IP-201ENST00000247833 MVPQ14764 893 aaKnown RBP15.99■□□□□ 0.15
RAB3IP-201ENST00000247833 SSH1Q8WYL5 1049 aa15.99■□□□□ 0.15
RAB3IP-201ENST00000247833 NUTM2FA1L443 756 aa15.99■□□□□ 0.15
RAB3IP-201ENST00000247833 NOB1Q9ULX3 412 aaKnown RBP15.99■□□□□ 0.15
RAB3IP-201ENST00000247833 MAP3K4Q9Y6R4 1608 aa15.98■□□□□ 0.15
RAB3IP-201ENST00000247833 ABCA6Q8N139 1617 aa15.98■□□□□ 0.15
RAB3IP-201ENST00000247833 THUMPD2Q9BTF0 503 aaKnown RBP15.98■□□□□ 0.15
RAB3IP-201ENST00000247833 CDK19Q9BWU1 502 aa15.98■□□□□ 0.15
RAB3IP-201ENST00000247833 CEP152O94986 1710 aa15.97■□□□□ 0.15
RAB3IP-201ENST00000247833 WAPLQ7Z5K2 1190 aa15.97■□□□□ 0.15
RAB3IP-201ENST00000247833 MYOM2P54296 1465 aa15.97■□□□□ 0.15
RAB3IP-201ENST00000247833 HSP90AA1P07900 732 aaKnown RBP15.97■□□□□ 0.15
RAB3IP-201ENST00000247833 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
RAB3IP-201ENST00000247833 LNPKQ9C0E8 428 aa15.96■□□□□ 0.15
RAB3IP-201ENST00000247833 GZF1Q9H116 711 aaPredicted RBP15.96■□□□□ 0.15
RAB3IP-201ENST00000247833 CLASP1Q7Z460 1538 aa15.96■□□□□ 0.14
RAB3IP-201ENST00000247833 TRIM27P14373 513 aa15.96■□□□□ 0.14
RAB3IP-201ENST00000247833 KIF1BO60333 1816 aa15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 ANKRD36BQ8N2N9 1353 aa15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 NINLQ9Y2I6 1382 aa15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 FYB1O15117 783 aa15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 IPO8O15397 1037 aaKnown RBP15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 DDX19BQ9UMR2 479 aa15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 EFCAB6Q5THR3 1501 aa15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 SLC52A1Q9NWF4 448 aa15.95■□□□□ 0.14
RAB3IP-201ENST00000247833 A0A1W2PP64 1363 aa15.94■□□□□ 0.14
RAB3IP-201ENST00000247833 SBNO2Q9Y2G9 1366 aa15.94■□□□□ 0.14
RAB3IP-201ENST00000247833 TMEM57Q8N5G2 664 aa15.94■□□□□ 0.14
RAB3IP-201ENST00000247833 ATF7IPQ6VMQ6 1270 aa15.94■□□□□ 0.14
RAB3IP-201ENST00000247833 PNNQ9H307 717 aaKnown RBP15.94■□□□□ 0.14
RAB3IP-201ENST00000247833 C1orf115Q9H7X2 142 aa15.94■□□□□ 0.14
RAB3IP-201ENST00000247833 APBB1O00213 710 aa15.91■□□□□ 0.14
RAB3IP-201ENST00000247833 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
RAB3IP-201ENST00000247833 INO80Q9ULG1 1556 aaPredicted RBP15.91■□□□□ 0.14
RAB3IP-201ENST00000247833 FAM69CQ0P6D2 419 aa15.91■□□□□ 0.14
RAB3IP-201ENST00000247833 ARAP3Q8WWN8 1544 aa15.91■□□□□ 0.14
RAB3IP-201ENST00000247833 ANKRD45Q5TZF3 282 aa15.9■□□□□ 0.14
RAB3IP-201ENST00000247833 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
RAB3IP-201ENST00000247833 POGZQ7Z3K3 1410 aa15.9■□□□□ 0.14
RAB3IP-201ENST00000247833 EIF5BO60841 1220 aaKnown RBP15.9■□□□□ 0.14
RAB3IP-201ENST00000247833 PPRC1Q5VV67 1664 aaKnown RBP15.9■□□□□ 0.14
RAB3IP-201ENST00000247833 CCDC27Q2M243 656 aa15.9■□□□□ 0.14
RAB3IP-201ENST00000247833 FOXD4L1Q9NU39 408 aa15.9■□□□□ 0.14
RAB3IP-201ENST00000247833 MYOM1P52179 1685 aa15.89■□□□□ 0.13
RAB3IP-201ENST00000247833 HSCBQ8IWL3 235 aa15.89■□□□□ 0.13
RAB3IP-201ENST00000247833 TRIM35Q9UPQ4 493 aa15.89■□□□□ 0.13
RAB3IP-201ENST00000247833 EMILIN1Q9Y6C2 1016 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms