RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 NUTM2BA6NNL0 878 aaPredicted RBP23.9■■□□□ 1.42
CLPP-201ENST00000245816 NUTM2EB1AL46 878 aaPredicted RBP23.9■■□□□ 1.42
CLPP-201ENST00000245816 NUTM2AQ8IVF1 878 aaPredicted RBP23.9■■□□□ 1.42
CLPP-201ENST00000245816 C14orf93Q9H972 538 aaKnown RBP23.9■■□□□ 1.42
CLPP-201ENST00000245816 CFAP70Q5T0N1 1121 aa23.89■■□□□ 1.41
CLPP-201ENST00000245816 SOS2Q07890 1332 aaPredicted RBP23.88■■□□□ 1.41
CLPP-201ENST00000245816 LRRC59Q96AG4 307 aaKnown RBP23.88■■□□□ 1.41
CLPP-201ENST00000245816 CDC42BPGQ6DT37 1551 aa23.87■■□□□ 1.41
CLPP-201ENST00000245816 YTHDC2Q9H6S0 1430 aaKnown RBP23.87■■□□□ 1.41
CLPP-201ENST00000245816 KNDC1Q76NI1 1749 aa23.87■■□□□ 1.41
CLPP-201ENST00000245816 MYOM2P54296 1465 aa23.86■■□□□ 1.41
CLPP-201ENST00000245816 NUTM2FA1L443 756 aa23.83■■□□□ 1.41
CLPP-201ENST00000245816 MEX3CQ5U5Q3 659 aaKnown RBP23.83■■□□□ 1.41
CLPP-201ENST00000245816 PXDNQ92626 1479 aa23.81■■□□□ 1.4
CLPP-201ENST00000245816 AFF2P51816 1311 aa23.8■■□□□ 1.4
CLPP-201ENST00000245816 ESCO1Q5FWF5 840 aa23.79■■□□□ 1.4
CLPP-201ENST00000245816 SIRT1Q96EB6 747 aa23.79■■□□□ 1.4
CLPP-201ENST00000245816 DHX57Q6P158 1386 aaKnown RBP23.78■■□□□ 1.4
CLPP-201ENST00000245816 ADGRB1O14514 1584 aa23.78■■□□□ 1.4
CLPP-201ENST00000245816 XPCQ01831 940 aaPredicted RBP23.78■■□□□ 1.4
CLPP-201ENST00000245816 FMN2Q9NZ56 1722 aa23.78■■□□□ 1.4
CLPP-201ENST00000245816 ZNF772Q68DY9 489 aaPredicted RBP23.77■■□□□ 1.4
CLPP-201ENST00000245816 FOXO3O43524 673 aa23.76■■□□□ 1.39
CLPP-201ENST00000245816 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
CLPP-201ENST00000245816 COL22A1Q8NFW1 1626 aaPredicted RBP23.73■■□□□ 1.39
CLPP-201ENST00000245816 ADAMTS2O95450 1211 aa23.73■■□□□ 1.39
CLPP-201ENST00000245816 KDM2AQ9Y2K7 1162 aa23.73■■□□□ 1.39
CLPP-201ENST00000245816 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
CLPP-201ENST00000245816 SAFB2Q14151 953 aaKnown RBP eCLIP23.72■■□□□ 1.39
CLPP-201ENST00000245816 PRAM1Q96QH2 718 aa23.72■■□□□ 1.39
CLPP-201ENST00000245816 DCAF11Q8TEB1 546 aa23.71■■□□□ 1.39
CLPP-201ENST00000245816 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
CLPP-201ENST00000245816 DLC1Q96QB1 1528 aa23.69■■□□□ 1.38
CLPP-201ENST00000245816 USP32Q8NFA0 1604 aa23.69■■□□□ 1.38
CLPP-201ENST00000245816 RXRBP28702 533 aa23.68■■□□□ 1.38
CLPP-201ENST00000245816 QTRT2Q9H974 415 aaKnown RBP23.67■■□□□ 1.38
CLPP-201ENST00000245816 TRAK1Q9UPV9 953 aa23.66■■□□□ 1.38
CLPP-201ENST00000245816 NGLY1Q96IV0 654 aa23.65■■□□□ 1.38
CLPP-201ENST00000245816 FNBP4Q8N3X1 1017 aaPredicted RBP23.64■■□□□ 1.37
CLPP-201ENST00000245816 RGS12O14924 1447 aa23.64■■□□□ 1.37
CLPP-201ENST00000245816 SPATA31A3Q5VYP0 1347 aa23.63■■□□□ 1.37
CLPP-201ENST00000245816 CDK12Q9NYV4 1490 aaPredicted RBP23.63■■□□□ 1.37
CLPP-201ENST00000245816 UPF1Q92900 1129 aaKnown RBP eCLIP23.63■■□□□ 1.37
CLPP-201ENST00000245816 PRR36Q9H6K5 1346 aa23.62■■□□□ 1.37
CLPP-201ENST00000245816 KRT28Q7Z3Y7 464 aa23.62■■□□□ 1.37
CLPP-201ENST00000245816 HIRIP3Q9BW71 556 aaPredicted RBP23.62■■□□□ 1.37
CLPP-201ENST00000245816 PHF8Q9UPP1 1060 aa23.62■■□□□ 1.37
CLPP-201ENST00000245816 ADGRB2O60241 1585 aa23.61■■□□□ 1.37
CLPP-201ENST00000245816 KIF1AQ12756 1690 aa23.61■■□□□ 1.37
CLPP-201ENST00000245816 BCL9LQ86UU0 1499 aa23.61■■□□□ 1.37
CLPP-201ENST00000245816 RBM6P78332 1123 aaKnown RBP23.59■■□□□ 1.37
CLPP-201ENST00000245816 POGKQ9P215 609 aa23.59■■□□□ 1.37
CLPP-201ENST00000245816 USP21Q9UK80 565 aa23.59■■□□□ 1.37
CLPP-201ENST00000245816 MINK1Q8N4C8 1332 aaPredicted RBP23.59■■□□□ 1.37
CLPP-201ENST00000245816 ATRNO75882 1429 aa23.58■■□□□ 1.36
CLPP-201ENST00000245816 MARF1Q9Y4F3 1742 aaKnown RBP23.57■■□□□ 1.36
CLPP-201ENST00000245816 PMFBP1Q8TBY8 1022 aa23.57■■□□□ 1.36
CLPP-201ENST00000245816 CABLES1Q8TDN4 633 aa23.55■■□□□ 1.36
CLPP-201ENST00000245816 ARHGEF28Q8N1W1 1705 aaKnown RBP23.55■■□□□ 1.36
CLPP-201ENST00000245816 ANKARQ7Z5J8 1434 aa23.54■■□□□ 1.36
CLPP-201ENST00000245816 TRIM26Q12899 539 aaPredicted RBP23.54■■□□□ 1.36
CLPP-201ENST00000245816 NBPF1Q3BBV0 1214 aa23.54■■□□□ 1.36
CLPP-201ENST00000245816 STAC3Q96MF2 364 aa23.54■■□□□ 1.36
CLPP-201ENST00000245816 TNS3Q68CZ2 1445 aa23.52■■□□□ 1.36
CLPP-201ENST00000245816 WASLO00401 505 aaPredicted RBP23.52■■□□□ 1.36
CLPP-201ENST00000245816 TRPM3Q9HCF6 1732 aaPredicted RBP23.51■■□□□ 1.35
CLPP-201ENST00000245816 SLIT2O94813 1529 aa23.51■■□□□ 1.35
CLPP-201ENST00000245816 TRPC5Q9UL62 973 aaPredicted RBP23.51■■□□□ 1.35
CLPP-201ENST00000245816 SBNO1A3KN83 1393 aa23.51■■□□□ 1.35
CLPP-201ENST00000245816 TULP4Q9NRJ4 1543 aa23.49■■□□□ 1.35
CLPP-201ENST00000245816 ABCA3Q99758 1704 aa23.48■■□□□ 1.35
CLPP-201ENST00000245816 PLEKHG5O94827 1062 aa23.47■■□□□ 1.35
CLPP-201ENST00000245816 PSME1Q06323 249 aa23.47■■□□□ 1.35
CLPP-201ENST00000245816 SIN3AQ96ST3 1273 aa23.47■■□□□ 1.35
CLPP-201ENST00000245816 KIAA1210Q9ULL0 1709 aa23.45■■□□□ 1.34
CLPP-201ENST00000245816 ALS2Q96Q42 1657 aa23.45■■□□□ 1.34
CLPP-201ENST00000245816 GLI3P10071 1580 aa23.45■■□□□ 1.34
CLPP-201ENST00000245816 ATP7BP35670 1465 aa23.45■■□□□ 1.34
CLPP-201ENST00000245816 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.44■■□□□ 1.34
CLPP-201ENST00000245816 UNC5CLQ8IV45 518 aa23.43■■□□□ 1.34
CLPP-201ENST00000245816 L3MBTL2Q969R5 705 aa23.43■■□□□ 1.34
CLPP-201ENST00000245816 GJD4Q96KN9 370 aaPredicted RBP23.43■■□□□ 1.34
CLPP-201ENST00000245816 NUDT16Q96DE0 195 aaKnown RBP23.42■■□□□ 1.34
CLPP-201ENST00000245816 EP400Q96L91 3159 aa23.41■■□□□ 1.34
CLPP-201ENST00000245816 FAM83GA6ND36 823 aa23.41■■□□□ 1.34
CLPP-201ENST00000245816 LMOD2Q6P5Q4 547 aa23.41■■□□□ 1.34
CLPP-201ENST00000245816 CDK19Q9BWU1 502 aa23.41■■□□□ 1.34
CLPP-201ENST00000245816 RALGAPBQ86X10 1494 aa23.41■■□□□ 1.34
CLPP-201ENST00000245816 CRYBG1Q9Y4K1 1723 aa23.39■■□□□ 1.34
CLPP-201ENST00000245816 ARHGEF10O15013 1369 aa23.39■■□□□ 1.33
CLPP-201ENST00000245816 PLCH1Q4KWH8 1693 aa23.38■■□□□ 1.33
CLPP-201ENST00000245816 TOPAZ1Q8N9V7 1692 aa23.36■■□□□ 1.33
CLPP-201ENST00000245816 EIF3AQ14152 1382 aaKnown RBP23.36■■□□□ 1.33
CLPP-201ENST00000245816 NGDNQ8NEJ9 315 aaKnown RBP23.34■■□□□ 1.33
CLPP-201ENST00000245816 GPRASP1Q5JY77 1395 aa23.33■■□□□ 1.33
CLPP-201ENST00000245816 VPS72Q15906 364 aa23.33■■□□□ 1.33
CLPP-201ENST00000245816 NRAPQ86VF7 1730 aa23.33■■□□□ 1.32
CLPP-201ENST00000245816 POLR3AO14802 1390 aaPredicted RBP23.32■■□□□ 1.32
CLPP-201ENST00000245816 BRWD3Q6RI45 1802 aa23.32■■□□□ 1.32
CLPP-201ENST00000245816 NWD2Q9ULI1 1742 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms