RNA–Protein interactions for RNA: ENST00000242059.9

SCRN1-201, Transcript of secernin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCRN1, Length 5,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-201ENST00000242059 B4GALNT3Q6L9W6 998 aa11.78□□□□□ -0.52
SCRN1-201ENST00000242059 RCAN3Q9UKA8 241 aa11.78□□□□□ -0.52
SCRN1-201ENST00000242059 STARD3NLO95772 234 aa11.77□□□□□ -0.52
SCRN1-201ENST00000242059 CCDC146Q8IYE0 955 aa11.77□□□□□ -0.52
SCRN1-201ENST00000242059 NOC3LQ8WTT2 800 aaKnown RBP11.77□□□□□ -0.52
SCRN1-201ENST00000242059 BCL11BQ9C0K0 894 aaPredicted RBP11.77□□□□□ -0.52
SCRN1-201ENST00000242059 LAMC3Q9Y6N6 1575 aa11.77□□□□□ -0.52
SCRN1-201ENST00000242059 MSH6P52701 1360 aa11.77□□□□□ -0.53
SCRN1-201ENST00000242059 DRC7Q8IY82 874 aa11.77□□□□□ -0.53
SCRN1-201ENST00000242059 MYBBP1AQ9BQG0 1328 aaKnown RBP11.77□□□□□ -0.53
SCRN1-201ENST00000242059 PRAM1Q96QH2 718 aa11.77□□□□□ -0.53
SCRN1-201ENST00000242059 TCERG1O14776 1098 aaKnown RBP11.77□□□□□ -0.53
SCRN1-201ENST00000242059 RIPK4P57078 832 aa11.77□□□□□ -0.53
SCRN1-201ENST00000242059 RNF20Q5VTR2 975 aa11.77□□□□□ -0.53
SCRN1-201ENST00000242059 HFM1A2PYH4 1435 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 E9PSI1 815 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
SCRN1-201ENST00000242059 FAM184AQ8NB25 1140 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 ERC2O15083 957 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 ZKSCAN1P17029 563 aaPredicted RBP11.76□□□□□ -0.53
SCRN1-201ENST00000242059 ZNF608Q9ULD9 1512 aaPredicted RBP11.76□□□□□ -0.53
SCRN1-201ENST00000242059 RTEL1-TNFRSF6BF6WH68 1400 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 AIMP1Q12904 312 aaKnown RBP11.76□□□□□ -0.53
SCRN1-201ENST00000242059 RSPH6AQ9H0K4 717 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 FAM177BA6PVY3 158 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 ZKSCAN2Q63HK3 967 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 UNC13AQ9UPW8 1703 aa11.76□□□□□ -0.53
SCRN1-201ENST00000242059 POLD1P28340 1107 aa11.75□□□□□ -0.53
SCRN1-201ENST00000242059 CABP2Q9NPB3 220 aa11.75□□□□□ -0.53
SCRN1-201ENST00000242059 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
SCRN1-201ENST00000242059 CPLX1O14810 134 aa11.75□□□□□ -0.53
SCRN1-201ENST00000242059 CCDC30Q5VVM6 783 aa11.75□□□□□ -0.53
SCRN1-201ENST00000242059 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
SCRN1-201ENST00000242059 KIAA0586Q9BVV6 1533 aa11.75□□□□□ -0.53
SCRN1-201ENST00000242059 TMEM132EQ6IEE7 984 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 ZNF530Q6P9A1 599 aaPredicted RBP11.74□□□□□ -0.53
SCRN1-201ENST00000242059 UBE2Q2Q8WVN8 375 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 CDK19Q9BWU1 502 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 H3BQV1 296 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 NFXL1Q6ZNB6 911 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 MAGI1Q96QZ7 1491 aaPredicted RBP11.74□□□□□ -0.53
SCRN1-201ENST00000242059 EXOC5O00471 708 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 NEUROD6Q96NK8 337 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 ANKRD30BQ9BXX2 1392 aa11.74□□□□□ -0.53
SCRN1-201ENST00000242059 ST18O60284 1047 aa11.73□□□□□ -0.53
SCRN1-201ENST00000242059 CNNM1Q9NRU3 951 aa11.73□□□□□ -0.53
SCRN1-201ENST00000242059 TROQ12816 1431 aaPredicted RBP11.73□□□□□ -0.53
SCRN1-201ENST00000242059 CASKIN1Q8WXD9 1431 aa11.73□□□□□ -0.53
SCRN1-201ENST00000242059 MTHFSP49914 203 aa11.73□□□□□ -0.53
SCRN1-201ENST00000242059 SART3Q15020 963 aaKnown RBP11.73□□□□□ -0.53
SCRN1-201ENST00000242059 DENND4BO75064 1496 aaPredicted RBP11.73□□□□□ -0.53
SCRN1-201ENST00000242059 TPD52L1Q16890 204 aaPredicted RBP11.73□□□□□ -0.53
SCRN1-201ENST00000242059 MPHOSPH8Q99549 860 aa11.73□□□□□ -0.53
SCRN1-201ENST00000242059 BRMS1Q9HCU9 246 aa11.73□□□□□ -0.53
SCRN1-201ENST00000242059 EPRSP07814 1512 aaKnown RBP11.72□□□□□ -0.53
SCRN1-201ENST00000242059 XBP1P17861 261 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 TSR1Q2NL82 804 aaKnown RBP11.72□□□□□ -0.53
SCRN1-201ENST00000242059 RALYLQ86SE5 291 aaKnown RBP11.72□□□□□ -0.53
SCRN1-201ENST00000242059 RILPL2Q969X0 211 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 GBP4Q96PP9 640 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 PLIN1O60240 522 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 SAFBQ15424 915 aaKnown RBP eCLIP11.72□□□□□ -0.53
SCRN1-201ENST00000242059 TMEM132AQ24JP5 1023 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 NECTIN2Q92692 538 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 CLUAP1Q96AJ1 413 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 RUNDC1Q96C34 613 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 GGNBP2Q9H3C7 697 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 TMOD3Q9NYL9 352 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 PODXL2Q9NZ53 605 aa11.72□□□□□ -0.53
SCRN1-201ENST00000242059 IPO9Q96P70 1041 aaKnown RBP11.71□□□□□ -0.53
SCRN1-201ENST00000242059 USP47Q96K76 1375 aa11.71□□□□□ -0.53
SCRN1-201ENST00000242059 IL27Q8NEV9 243 aa11.71□□□□□ -0.54
SCRN1-201ENST00000242059 ATAD2Q6PL18 1390 aa11.71□□□□□ -0.54
SCRN1-201ENST00000242059 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.54
SCRN1-201ENST00000242059 WASHC4Q2M389 1173 aa11.71□□□□□ -0.54
SCRN1-201ENST00000242059 AK7Q96M32 723 aa11.71□□□□□ -0.54
SCRN1-201ENST00000242059 DNMBPQ6XZF7 1577 aa11.7□□□□□ -0.54
SCRN1-201ENST00000242059 ATP6V1DQ9Y5K8 247 aa11.7□□□□□ -0.54
SCRN1-201ENST00000242059 UBTFL1P0CB47 393 aaPredicted RBP11.7□□□□□ -0.54
SCRN1-201ENST00000242059 FYB1O15117 783 aa11.7□□□□□ -0.54
SCRN1-201ENST00000242059 TPM3P06753 285 aa11.69□□□□□ -0.54
SCRN1-201ENST00000242059 ZC3H6P61129 1189 aaKnown RBP11.69□□□□□ -0.54
SCRN1-201ENST00000242059 HOOK1Q9UJC3 728 aaKnown RBP11.69□□□□□ -0.54
SCRN1-201ENST00000242059 PHF8Q9UPP1 1060 aa11.69□□□□□ -0.54
SCRN1-201ENST00000242059 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
SCRN1-201ENST00000242059 GNAI3P08754 354 aa11.69□□□□□ -0.54
SCRN1-201ENST00000242059 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
SCRN1-201ENST00000242059 CCDC158Q5M9N0 1113 aa11.69□□□□□ -0.54
SCRN1-201ENST00000242059 DDX19BQ9UMR2 479 aa11.69□□□□□ -0.54
SCRN1-201ENST00000242059 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCRN1-201ENST00000242059 A0A087WZG4 1122 aa11.68□□□□□ -0.54
SCRN1-201ENST00000242059 EFCAB5A4FU69 1503 aa11.68□□□□□ -0.54
SCRN1-201ENST00000242059 HMOX1P09601 288 aa11.68□□□□□ -0.54
SCRN1-201ENST00000242059 CREBRFQ8IUR6 639 aa11.68□□□□□ -0.54
SCRN1-201ENST00000242059 ANKRD20A12PQ8NF67 263 aa11.68□□□□□ -0.54
SCRN1-201ENST00000242059 CCDC61Q9Y6R9 512 aa11.68□□□□□ -0.54
SCRN1-201ENST00000242059 URB2Q14146 1524 aaKnown RBP11.68□□□□□ -0.54
SCRN1-201ENST00000242059 C9orf84Q5VXU9 1444 aa11.68□□□□□ -0.54
SCRN1-201ENST00000242059 NCOA2Q15596 1464 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms