RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 FAM13BQ9NYF5 915 aa13.63□□□□□ -0.23
COPA-201ENST00000241704 DHX29Q7Z478 1369 aaKnown RBP13.63□□□□□ -0.23
COPA-201ENST00000241704 CLCN1P35523 988 aa13.63□□□□□ -0.23
COPA-201ENST00000241704 SLC4A10Q6U841 1118 aa13.63□□□□□ -0.23
COPA-201ENST00000241704 PTMAP06454 111 aaKnown RBP13.63□□□□□ -0.23
COPA-201ENST00000241704 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.63□□□□□ -0.23
COPA-201ENST00000241704 CFAP43Q8NDM7 1665 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 ZKSCAN2Q63HK3 967 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 DISP1Q96F81 1524 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 ESPNB1AK53 854 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 NLRP6P59044 892 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 ESCO1Q5FWF5 840 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 TTC5Q8N0Z6 440 aa13.62□□□□□ -0.23
COPA-201ENST00000241704 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
COPA-201ENST00000241704 DENND4BO75064 1496 aaPredicted RBP13.61□□□□□ -0.23
COPA-201ENST00000241704 TULP1O00294 542 aaPredicted RBP13.61□□□□□ -0.23
COPA-201ENST00000241704 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
COPA-201ENST00000241704 NUTM2GQ5VZR2 741 aa13.61□□□□□ -0.23
COPA-201ENST00000241704 RAPGEF4Q8WZA2 1011 aa13.6□□□□□ -0.23
COPA-201ENST00000241704 NLRP2Q9NX02 1062 aa13.6□□□□□ -0.23
COPA-201ENST00000241704 ITSN2Q9NZM3 1697 aa13.6□□□□□ -0.23
COPA-201ENST00000241704 HMMRO75330 724 aa13.6□□□□□ -0.23
COPA-201ENST00000241704 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
COPA-201ENST00000241704 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
COPA-201ENST00000241704 ZRSR1Q15695 479 aaKnown RBP13.6□□□□□ -0.23
COPA-201ENST00000241704 MTERF4Q7Z6M4 381 aaKnown RBP13.6□□□□□ -0.23
COPA-201ENST00000241704 GPRASP1Q5JY77 1395 aa13.59□□□□□ -0.23
COPA-201ENST00000241704 CDK19Q9BWU1 502 aa13.59□□□□□ -0.23
COPA-201ENST00000241704 RRAGDQ9NQL2 400 aaPredicted RBP13.59□□□□□ -0.23
COPA-201ENST00000241704 ASXL2Q76L83 1435 aa13.59□□□□□ -0.23
COPA-201ENST00000241704 PBRM1Q86U86 1689 aa13.58□□□□□ -0.24
COPA-201ENST00000241704 COG6Q9Y2V7 657 aa13.57□□□□□ -0.24
COPA-201ENST00000241704 TCP11L2Q8N4U5 519 aa13.57□□□□□ -0.24
COPA-201ENST00000241704 CABP1Q9NZU7 370 aa13.57□□□□□ -0.24
COPA-201ENST00000241704 CHMP5Q9NZZ3 219 aa13.57□□□□□ -0.24
COPA-201ENST00000241704 MCCP23508 829 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 HMOX1P09601 288 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 ZNF692Q9BU19 519 aaPredicted RBP13.56□□□□□ -0.24
COPA-201ENST00000241704 TRAK2O60296 914 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 TPRNQ4KMQ1 711 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 ABTB2Q8N961 1025 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 PPP6R1Q9UPN7 881 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 ATAD2Q6PL18 1390 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 WDR7Q9Y4E6 1490 aa13.56□□□□□ -0.24
COPA-201ENST00000241704 IDI1Q13907 227 aa13.55□□□□□ -0.24
COPA-201ENST00000241704 SKOR2Q2VWA4 1001 aaPredicted RBP13.55□□□□□ -0.24
COPA-201ENST00000241704 KIAA1211Q6ZU35 1233 aa13.55□□□□□ -0.24
COPA-201ENST00000241704 GNAI1P63096 354 aa13.55□□□□□ -0.24
COPA-201ENST00000241704 SYCP2Q9BX26 1530 aa13.55□□□□□ -0.24
COPA-201ENST00000241704 ADGRF5Q8IZF2 1346 aa13.55□□□□□ -0.24
COPA-201ENST00000241704 TARBP1Q13395 1621 aaKnown RBP13.55□□□□□ -0.24
COPA-201ENST00000241704 DUOX2Q9NRD8 1548 aa13.55□□□□□ -0.24
COPA-201ENST00000241704 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
COPA-201ENST00000241704 PIP4K2BP78356 416 aa13.54□□□□□ -0.24
COPA-201ENST00000241704 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
COPA-201ENST00000241704 RTEL1-TNFRSF6BF6WH68 1400 aa13.54□□□□□ -0.24
COPA-201ENST00000241704 CDCA7LQ96GN5 454 aa13.54□□□□□ -0.24
COPA-201ENST00000241704 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
COPA-201ENST00000241704 GRPEL1Q9HAV7 217 aa13.53□□□□□ -0.24
COPA-201ENST00000241704 DDX19BQ9UMR2 479 aa13.53□□□□□ -0.24
COPA-201ENST00000241704 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
COPA-201ENST00000241704 NUTM2BA6NNL0 878 aaPredicted RBP13.53□□□□□ -0.24
COPA-201ENST00000241704 NUTM2EB1AL46 878 aaPredicted RBP13.53□□□□□ -0.24
COPA-201ENST00000241704 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
COPA-201ENST00000241704 KDM5BQ9UGL1 1544 aa13.53□□□□□ -0.24
COPA-201ENST00000241704 EIF2S2P20042 333 aaKnown RBP13.52□□□□□ -0.24
COPA-201ENST00000241704 API5Q9BZZ5 524 aaKnown RBP13.52□□□□□ -0.25
COPA-201ENST00000241704 TRAPPC8Q9Y2L5 1435 aa13.52□□□□□ -0.25
COPA-201ENST00000241704 FBXO31Q5XUX0 539 aaPredicted RBP13.51□□□□□ -0.25
COPA-201ENST00000241704 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
COPA-201ENST00000241704 R3HCC1Q9Y3T6 440 aaKnown RBP13.51□□□□□ -0.25
COPA-201ENST00000241704 ABCC2Q92887 1545 aa13.51□□□□□ -0.25
COPA-201ENST00000241704 FAM135AQ9P2D6 1515 aa13.51□□□□□ -0.25
COPA-201ENST00000241704 NEXNQ0ZGT2 675 aa13.51□□□□□ -0.25
COPA-201ENST00000241704 KLHL34Q8N239 644 aa13.51□□□□□ -0.25
COPA-201ENST00000241704 KIF16BQ96L93 1317 aa13.51□□□□□ -0.25
COPA-201ENST00000241704 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
COPA-201ENST00000241704 CSPP1Q1MSJ5 1256 aa13.5□□□□□ -0.25
COPA-201ENST00000241704 MCM4P33991 863 aa13.5□□□□□ -0.25
COPA-201ENST00000241704 XRCC6P12956 609 aaKnown RBP eCLIP13.5□□□□□ -0.25
COPA-201ENST00000241704 SKAP1Q86WV1 359 aa13.5□□□□□ -0.25
COPA-201ENST00000241704 GPATCH3Q96I76 525 aa13.5□□□□□ -0.25
COPA-201ENST00000241704 ZNF518AQ6AHZ1 1483 aa13.49□□□□□ -0.25
COPA-201ENST00000241704 PDE4CQ08493 712 aa13.49□□□□□ -0.25
COPA-201ENST00000241704 AAMPQ13685 434 aa13.49□□□□□ -0.25
COPA-201ENST00000241704 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
COPA-201ENST00000241704 PRKAR2BP31323 418 aa13.49□□□□□ -0.25
COPA-201ENST00000241704 C14orf93Q9H972 538 aaKnown RBP13.49□□□□□ -0.25
COPA-201ENST00000241704 CCDC61Q9Y6R9 512 aa13.49□□□□□ -0.25
COPA-201ENST00000241704 AMER1Q5JTC6 1135 aaPredicted RBP13.48□□□□□ -0.25
COPA-201ENST00000241704 A2MP01023 1474 aa13.48□□□□□ -0.25
COPA-201ENST00000241704 MFAP1P55081 439 aaKnown RBP13.48□□□□□ -0.25
COPA-201ENST00000241704 NOS1P29475 1434 aa13.48□□□□□ -0.25
COPA-201ENST00000241704 NSD3Q9BZ95 1437 aa13.48□□□□□ -0.25
COPA-201ENST00000241704 CCDC173Q0VFZ6 552 aa13.48□□□□□ -0.25
COPA-201ENST00000241704 CHAF1AQ13111 956 aaPredicted RBP13.47□□□□□ -0.25
COPA-201ENST00000241704 CEP170Q5SW79 1584 aa13.47□□□□□ -0.25
COPA-201ENST00000241704 CEBPAP49715 358 aaPredicted RBP13.47□□□□□ -0.25
COPA-201ENST00000241704 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms