RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 CHD1LQ86WJ1 897 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 SMC3Q9UQE7 1217 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 CHMP3Q9Y3E7 222 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 ERBINQ96RT1 1412 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 SYCE3A1L190 88 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 SSFA2P28290 1259 aa11.56□□□□□ -0.56
NUDCD1-201ENST00000239690 EFCAB2Q5VUJ9 269 aa11.55□□□□□ -0.56
NUDCD1-201ENST00000239690 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
NUDCD1-201ENST00000239690 DAPK1P53355 1430 aa11.55□□□□□ -0.56
NUDCD1-201ENST00000239690 TPD52L1Q16890 204 aaPredicted RBP11.55□□□□□ -0.56
NUDCD1-201ENST00000239690 MTHFSP49914 203 aa11.54□□□□□ -0.56
NUDCD1-201ENST00000239690 FANCD2Q9BXW9 1451 aa11.54□□□□□ -0.56
NUDCD1-201ENST00000239690 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
NUDCD1-201ENST00000239690 VPS37CA5D8V6 355 aaPredicted RBP11.54□□□□□ -0.56
NUDCD1-201ENST00000239690 RARSP54136 660 aaKnown RBP11.54□□□□□ -0.56
NUDCD1-201ENST00000239690 GNL2Q13823 731 aaKnown RBP11.54□□□□□ -0.56
NUDCD1-201ENST00000239690 CCDC112Q8NEF3 446 aa11.54□□□□□ -0.56
NUDCD1-201ENST00000239690 HOMER1Q86YM7 354 aa11.53□□□□□ -0.56
NUDCD1-201ENST00000239690 GPATCH3Q96I76 525 aa11.53□□□□□ -0.56
NUDCD1-201ENST00000239690 BICD2Q8TD16 824 aa11.53□□□□□ -0.56
NUDCD1-201ENST00000239690 TRIM5Q9C035 493 aa11.53□□□□□ -0.56
NUDCD1-201ENST00000239690 SPAG9O60271 1321 aaKnown RBP11.53□□□□□ -0.56
NUDCD1-201ENST00000239690 NOB1Q9ULX3 412 aaKnown RBP11.53□□□□□ -0.56
NUDCD1-201ENST00000239690 DIAPH1O60610 1272 aaKnown RBP11.52□□□□□ -0.56
NUDCD1-201ENST00000239690 SPC24Q8NBT2 197 aa11.52□□□□□ -0.56
NUDCD1-201ENST00000239690 SCAPERQ9BY12 1400 aa11.52□□□□□ -0.56
NUDCD1-201ENST00000239690 BAG4O95429 457 aaKnown RBP11.52□□□□□ -0.56
NUDCD1-201ENST00000239690 TSR2Q969E8 191 aaKnown RBP11.52□□□□□ -0.56
NUDCD1-201ENST00000239690 HS1BP3Q53T59 392 aa11.52□□□□□ -0.57
NUDCD1-201ENST00000239690 HSP90B1P14625 803 aaKnown RBP11.52□□□□□ -0.57
NUDCD1-201ENST00000239690 CCAR2Q8N163 923 aaKnown RBP11.52□□□□□ -0.57
NUDCD1-201ENST00000239690 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
NUDCD1-201ENST00000239690 H3BQV1 296 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 KIF3BO15066 747 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 IFFO2Q5TF58 517 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 MNS1Q8NEH6 495 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 EVC2Q86UK5 1308 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 CWC15Q9P013 229 aaKnown RBP11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 WDR33Q9C0J8 1336 aaKnown RBP11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 PDS5BQ9NTI5 1447 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 GNAI1P63096 354 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 SF3A1Q15459 793 aaKnown RBP11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 ZKSCAN5Q9Y2L8 839 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 KDM2BQ8NHM5 1336 aa11.51□□□□□ -0.57
NUDCD1-201ENST00000239690 GAPVD1Q14C86 1478 aa11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 SMAP1Q8IYB5 467 aaPredicted RBP11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 FIBPO43427 364 aa11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 SEC24BO95487 1268 aa11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 ZKSCAN1P17029 563 aaPredicted RBP11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 PPP4R3BQ5MIZ7 849 aa11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 CGNQ9P2M7 1197 aaKnown RBP11.5□□□□□ -0.57
NUDCD1-201ENST00000239690 CCDC192P0DO97 292 aa11.49□□□□□ -0.57
NUDCD1-201ENST00000239690 RUFY2Q8WXA3 655 aa11.49□□□□□ -0.57
NUDCD1-201ENST00000239690 C1orf115Q9H7X2 142 aa11.49□□□□□ -0.57
NUDCD1-201ENST00000239690 C14orf37Q86TY3 774 aa11.49□□□□□ -0.57
NUDCD1-201ENST00000239690 ERC2O15083 957 aa11.49□□□□□ -0.57
NUDCD1-201ENST00000239690 TERF1P54274 439 aa11.48□□□□□ -0.57
NUDCD1-201ENST00000239690 SETQ01105 290 aaPredicted RBP11.48□□□□□ -0.57
NUDCD1-201ENST00000239690 PARD3Q8TEW0 1356 aa11.48□□□□□ -0.57
NUDCD1-201ENST00000239690 SOX12O15370 315 aa11.48□□□□□ -0.57
NUDCD1-201ENST00000239690 ZSCAN23Q3MJ62 389 aa11.48□□□□□ -0.57
NUDCD1-201ENST00000239690 CHMP4AQ9BY43 222 aa11.48□□□□□ -0.57
NUDCD1-201ENST00000239690 HDAC5Q9UQL6 1122 aa11.48□□□□□ -0.57
NUDCD1-201ENST00000239690 CCDC27Q2M243 656 aa11.47□□□□□ -0.57
NUDCD1-201ENST00000239690 SNX21Q969T3 373 aa11.47□□□□□ -0.57
NUDCD1-201ENST00000239690 CCDC94Q9BW85 323 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-201ENST00000239690 GGT6Q6P531 493 aa11.47□□□□□ -0.57
NUDCD1-201ENST00000239690 TMEM57Q8N5G2 664 aa11.47□□□□□ -0.57
NUDCD1-201ENST00000239690 BBXQ8WY36 941 aaPredicted RBP11.47□□□□□ -0.57
NUDCD1-201ENST00000239690 PCDHB15Q9Y5E8 787 aa11.47□□□□□ -0.57
NUDCD1-201ENST00000239690 GTPBP4Q9BZE4 634 aaKnown RBP11.46□□□□□ -0.57
NUDCD1-201ENST00000239690 NCAPD3P42695 1498 aa11.46□□□□□ -0.57
NUDCD1-201ENST00000239690 BMP2KLQ5H9B9 411 aa11.46□□□□□ -0.58
NUDCD1-201ENST00000239690 NPHP1O15259 732 aa11.46□□□□□ -0.58
NUDCD1-201ENST00000239690 PDE4CQ08493 712 aa11.46□□□□□ -0.58
NUDCD1-201ENST00000239690 RAB3GAP1Q15042 981 aa11.46□□□□□ -0.58
NUDCD1-201ENST00000239690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.46□□□□□ -0.58
NUDCD1-201ENST00000239690 SMC5Q8IY18 1101 aa11.46□□□□□ -0.58
NUDCD1-201ENST00000239690 USP25Q9UHP3 1055 aa11.46□□□□□ -0.58
NUDCD1-201ENST00000239690 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 CCDC34Q96HJ3 373 aa11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 ERICH4A6NGS2 130 aa11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 LRSAM1Q6UWE0 723 aa11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 CCDC73Q6ZRK6 1079 aa11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 JPH4Q96JJ6 628 aa11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 CALCOCO1Q9P1Z2 691 aa11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 GPRASP1Q5JY77 1395 aa11.45□□□□□ -0.58
NUDCD1-201ENST00000239690 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
NUDCD1-201ENST00000239690 C9orf84Q5VXU9 1444 aa11.44□□□□□ -0.58
NUDCD1-201ENST00000239690 HECW1Q76N89 1606 aa11.44□□□□□ -0.58
NUDCD1-201ENST00000239690 TSPYL1Q9H0U9 437 aa11.44□□□□□ -0.58
NUDCD1-201ENST00000239690 ABCC5O15440 1437 aa11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 PDCP20941 246 aa11.43□□□□□ -0.58
NUDCD1-201ENST00000239690 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms