RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 SHPRHQ149N8 1683 aa13.24□□□□□ -0.29
TGFB3-201ENST00000238682 SENP3Q9H4L4 574 aaPredicted RBP13.23□□□□□ -0.29
TGFB3-201ENST00000238682 IFT172Q9UG01 1749 aa13.23□□□□□ -0.29
TGFB3-201ENST00000238682 PHLPP1O60346 1717 aa13.23□□□□□ -0.29
TGFB3-201ENST00000238682 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.23□□□□□ -0.29
TGFB3-201ENST00000238682 KIAA1210Q9ULL0 1709 aa13.23□□□□□ -0.29
TGFB3-201ENST00000238682 SPATA31A6Q5VVP1 1343 aa13.23□□□□□ -0.29
TGFB3-201ENST00000238682 CHGAP10645 457 aaKnown RBP13.22□□□□□ -0.29
TGFB3-201ENST00000238682 PPLO60437 1756 aa13.22□□□□□ -0.29
TGFB3-201ENST00000238682 COL16A1Q07092 1604 aaPredicted RBP13.22□□□□□ -0.29
TGFB3-201ENST00000238682 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
TGFB3-201ENST00000238682 KNDC1Q76NI1 1749 aa13.21□□□□□ -0.29
TGFB3-201ENST00000238682 SLAIN2Q9P270 581 aa13.21□□□□□ -0.29
TGFB3-201ENST00000238682 ATF3P18847 181 aa13.2□□□□□ -0.3
TGFB3-201ENST00000238682 TECPR2O15040 1411 aa13.2□□□□□ -0.3
TGFB3-201ENST00000238682 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
TGFB3-201ENST00000238682 NHSL1Q5SYE7 1610 aa13.19□□□□□ -0.3
TGFB3-201ENST00000238682 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
TGFB3-201ENST00000238682 AMOTL2Q9Y2J4 779 aa13.18□□□□□ -0.3
TGFB3-201ENST00000238682 CDC42BPGQ6DT37 1551 aa13.18□□□□□ -0.3
TGFB3-201ENST00000238682 NRXN1Q9ULB1 1477 aa13.18□□□□□ -0.3
TGFB3-201ENST00000238682 SIRT1Q96EB6 747 aa13.18□□□□□ -0.3
TGFB3-201ENST00000238682 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
TGFB3-201ENST00000238682 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
TGFB3-201ENST00000238682 MST1RQ04912 1400 aa13.17□□□□□ -0.3
TGFB3-201ENST00000238682 RALGAPBQ86X10 1494 aa13.16□□□□□ -0.3
TGFB3-201ENST00000238682 FOXD1Q16676 465 aa13.15□□□□□ -0.3
TGFB3-201ENST00000238682 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
TGFB3-201ENST00000238682 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
TGFB3-201ENST00000238682 ILDR2Q71H61 639 aa13.14□□□□□ -0.31
TGFB3-201ENST00000238682 LRPPRCP42704 1394 aaKnown RBP13.14□□□□□ -0.31
TGFB3-201ENST00000238682 CDK12Q9NYV4 1490 aaPredicted RBP13.14□□□□□ -0.31
TGFB3-201ENST00000238682 METP08581 1390 aa13.13□□□□□ -0.31
TGFB3-201ENST00000238682 NALCNQ8IZF0 1738 aa13.13□□□□□ -0.31
TGFB3-201ENST00000238682 DLC1Q96QB1 1528 aa13.13□□□□□ -0.31
TGFB3-201ENST00000238682 PAXIP1Q6ZW49 1069 aaPredicted RBP13.13□□□□□ -0.31
TGFB3-201ENST00000238682 L3MBTL2Q969R5 705 aa13.13□□□□□ -0.31
TGFB3-201ENST00000238682 TSHZ2Q9NRE2 1034 aa13.13□□□□□ -0.31
TGFB3-201ENST00000238682 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
TGFB3-201ENST00000238682 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
TGFB3-201ENST00000238682 PIK3C2GO75747 1445 aa13.12□□□□□ -0.31
TGFB3-201ENST00000238682 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
TGFB3-201ENST00000238682 GPRASP1Q5JY77 1395 aa13.12□□□□□ -0.31
TGFB3-201ENST00000238682 KIF1AQ12756 1690 aa13.11□□□□□ -0.31
TGFB3-201ENST00000238682 EIF3AQ14152 1382 aaKnown RBP13.1□□□□□ -0.31
TGFB3-201ENST00000238682 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
TGFB3-201ENST00000238682 ZNF772Q68DY9 489 aaPredicted RBP13.09□□□□□ -0.31
TGFB3-201ENST00000238682 C1orf167Q5SNV9 1468 aa13.09□□□□□ -0.31
TGFB3-201ENST00000238682 BRINP3Q76B58 766 aa13.08□□□□□ -0.32
TGFB3-201ENST00000238682 LRRC59Q96AG4 307 aaKnown RBP13.07□□□□□ -0.32
TGFB3-201ENST00000238682 ADGRB2O60241 1585 aa13.07□□□□□ -0.32
TGFB3-201ENST00000238682 ROBO2Q9HCK4 1378 aa13.05□□□□□ -0.32
TGFB3-201ENST00000238682 ANKARQ7Z5J8 1434 aa13.05□□□□□ -0.32
TGFB3-201ENST00000238682 DCAF11Q8TEB1 546 aa13.05□□□□□ -0.32
TGFB3-201ENST00000238682 FMN2Q9NZ56 1722 aa13.04□□□□□ -0.32
TGFB3-201ENST00000238682 ANP32EQ9BTT0 268 aa13.04□□□□□ -0.32
TGFB3-201ENST00000238682 YTHDC2Q9H6S0 1430 aaKnown RBP13.03□□□□□ -0.32
TGFB3-201ENST00000238682 SOS2Q07890 1332 aaPredicted RBP13.03□□□□□ -0.32
TGFB3-201ENST00000238682 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
TGFB3-201ENST00000238682 NUTM2DQ5VT03 806 aaPredicted RBP13.02□□□□□ -0.32
TGFB3-201ENST00000238682 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.32
TGFB3-201ENST00000238682 NPHP3Q7Z494 1330 aa13.02□□□□□ -0.32
TGFB3-201ENST00000238682 LRP6O75581 1613 aa13.02□□□□□ -0.33
TGFB3-201ENST00000238682 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
TGFB3-201ENST00000238682 MEX3CQ5U5Q3 659 aaKnown RBP13□□□□□ -0.33
TGFB3-201ENST00000238682 DIEXFQ68CQ4 756 aaKnown RBP12.99□□□□□ -0.33
TGFB3-201ENST00000238682 ROCK2O75116 1388 aaKnown RBP12.99□□□□□ -0.33
TGFB3-201ENST00000238682 NBPF8Q3BBV2 869 aa12.99□□□□□ -0.33
TGFB3-201ENST00000238682 RGL3Q3MIN7 710 aa12.99□□□□□ -0.33
TGFB3-201ENST00000238682 RGS17Q9UGC6 210 aaPredicted RBP12.99□□□□□ -0.33
TGFB3-201ENST00000238682 ADGRB1O14514 1584 aa12.99□□□□□ -0.33
TGFB3-201ENST00000238682 ADGRF5Q8IZF2 1346 aa12.98□□□□□ -0.33
TGFB3-201ENST00000238682 PXDNQ92626 1479 aa12.98□□□□□ -0.33
TGFB3-201ENST00000238682 EIF4G2P78344 907 aaKnown RBP eCLIP12.98□□□□□ -0.33
TGFB3-201ENST00000238682 SBNO2Q9Y2G9 1366 aa12.97□□□□□ -0.33
TGFB3-201ENST00000238682 SBNO1A3KN83 1393 aa12.97□□□□□ -0.33
TGFB3-201ENST00000238682 NBR1Q14596 966 aa12.97□□□□□ -0.33
TGFB3-201ENST00000238682 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.96□□□□□ -0.33
TGFB3-201ENST00000238682 RBM33Q96EV2 1170 aaKnown RBP12.96□□□□□ -0.34
TGFB3-201ENST00000238682 ARHGEF10O15013 1369 aa12.94□□□□□ -0.34
TGFB3-201ENST00000238682 USP47Q96K76 1375 aa12.94□□□□□ -0.34
TGFB3-201ENST00000238682 PSME1Q06323 249 aa12.94□□□□□ -0.34
TGFB3-201ENST00000238682 MARF1Q9Y4F3 1742 aaKnown RBP12.93□□□□□ -0.34
TGFB3-201ENST00000238682 CARD11Q9BXL7 1154 aa12.93□□□□□ -0.34
TGFB3-201ENST00000238682 BRD4O60885 1362 aaPredicted RBP12.93□□□□□ -0.34
TGFB3-201ENST00000238682 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
TGFB3-201ENST00000238682 PUS7Q96PZ0 661 aaKnown RBP12.93□□□□□ -0.34
TGFB3-201ENST00000238682 POTEAQ6S8J7 498 aa12.92□□□□□ -0.34
TGFB3-201ENST00000238682 ITSN1Q15811 1721 aa12.91□□□□□ -0.34
TGFB3-201ENST00000238682 RXRBP28702 533 aa12.91□□□□□ -0.34
TGFB3-201ENST00000238682 NGLY1Q96IV0 654 aa12.91□□□□□ -0.34
TGFB3-201ENST00000238682 ATRNO75882 1429 aa12.91□□□□□ -0.34
TGFB3-201ENST00000238682 TNS3Q68CZ2 1445 aa12.91□□□□□ -0.34
TGFB3-201ENST00000238682 ARHGEF28Q8N1W1 1705 aaKnown RBP12.91□□□□□ -0.34
TGFB3-201ENST00000238682 RBM6P78332 1123 aaKnown RBP12.9□□□□□ -0.34
TGFB3-201ENST00000238682 IGSF3O75054 1194 aa12.9□□□□□ -0.34
TGFB3-201ENST00000238682 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
TGFB3-201ENST00000238682 FNBP4Q8N3X1 1017 aaPredicted RBP12.9□□□□□ -0.34
TGFB3-201ENST00000238682 UBE2Q2Q8WVN8 375 aa12.9□□□□□ -0.34
TGFB3-201ENST00000238682 AFF2P51816 1311 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms