RNA–Protein interactions for RNA: ENST00000237654.8

CCNI-201, Transcript of cyclin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNI, Length 2,772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI-201ENST00000237654 NPC1L1Q9UHC9 1359 aa17.26■□□□□ 0.35
CCNI-201ENST00000237654 MFAP1P55081 439 aaKnown RBP17.26■□□□□ 0.35
CCNI-201ENST00000237654 SPHKAPQ2M3C7 1700 aa17.25■□□□□ 0.35
CCNI-201ENST00000237654 GGNBP2Q9H3C7 697 aa17.24■□□□□ 0.35
CCNI-201ENST00000237654 KDM5AP29375 1690 aaKnown RBP17.24■□□□□ 0.35
CCNI-201ENST00000237654 FTSJ3Q8IY81 847 aaKnown RBP17.23■□□□□ 0.35
CCNI-201ENST00000237654 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
CCNI-201ENST00000237654 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
CCNI-201ENST00000237654 ZCCHC11Q5TAX3 1644 aaKnown RBP17.22■□□□□ 0.35
CCNI-201ENST00000237654 CEP152O94986 1710 aa17.22■□□□□ 0.35
CCNI-201ENST00000237654 ZFYVE16Q7Z3T8 1539 aa17.22■□□□□ 0.35
CCNI-201ENST00000237654 POLR3AO14802 1390 aaPredicted RBP17.22■□□□□ 0.35
CCNI-201ENST00000237654 BECN1Q14457 450 aa17.21■□□□□ 0.35
CCNI-201ENST00000237654 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
CCNI-201ENST00000237654 ABCA6Q8N139 1617 aa17.21■□□□□ 0.35
CCNI-201ENST00000237654 ANTXR1Q9H6X2 564 aa17.21■□□□□ 0.35
CCNI-201ENST00000237654 SMC4Q9NTJ3 1288 aa17.21■□□□□ 0.35
CCNI-201ENST00000237654 TBC1D32Q96NH3 1257 aa17.2■□□□□ 0.34
CCNI-201ENST00000237654 PMFBP1Q8TBY8 1022 aa17.2■□□□□ 0.34
CCNI-201ENST00000237654 NLRP1Q9C000 1473 aa17.2■□□□□ 0.34
CCNI-201ENST00000237654 FANCAO15360 1455 aa17.19■□□□□ 0.34
CCNI-201ENST00000237654 SSH1Q8WYL5 1049 aa17.18■□□□□ 0.34
CCNI-201ENST00000237654 UPF2Q9HAU5 1272 aaKnown RBP17.18■□□□□ 0.34
CCNI-201ENST00000237654 KIAA1210Q9ULL0 1709 aa17.18■□□□□ 0.34
CCNI-201ENST00000237654 MVPQ14764 893 aaKnown RBP17.18■□□□□ 0.34
CCNI-201ENST00000237654 RWDD1Q9H446 243 aaPredicted RBP17.18■□□□□ 0.34
CCNI-201ENST00000237654 TRIM27P14373 513 aa17.17■□□□□ 0.34
CCNI-201ENST00000237654 DZIP1LQ8IYY4 767 aaKnown RBP17.17■□□□□ 0.34
CCNI-201ENST00000237654 STAC3Q96MF2 364 aa17.17■□□□□ 0.34
CCNI-201ENST00000237654 PANK2Q9BZ23 570 aa17.17■□□□□ 0.34
CCNI-201ENST00000237654 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
CCNI-201ENST00000237654 FOXD4L1Q9NU39 408 aa17.17■□□□□ 0.34
CCNI-201ENST00000237654 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
CCNI-201ENST00000237654 NINLQ9Y2I6 1382 aa17.16■□□□□ 0.34
CCNI-201ENST00000237654 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
CCNI-201ENST00000237654 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
CCNI-201ENST00000237654 PHF23Q9BUL5 403 aaPredicted RBP17.16■□□□□ 0.34
CCNI-201ENST00000237654 SRPK2P78362 688 aaKnown RBP17.15■□□□□ 0.34
CCNI-201ENST00000237654 RRAGDQ9NQL2 400 aaPredicted RBP17.15■□□□□ 0.34
CCNI-201ENST00000237654 MAP3K4Q9Y6R4 1608 aa17.15■□□□□ 0.34
CCNI-201ENST00000237654 WDR63Q8IWG1 891 aa17.15■□□□□ 0.34
CCNI-201ENST00000237654 C14orf93Q9H972 538 aaKnown RBP17.15■□□□□ 0.34
CCNI-201ENST00000237654 ATP7AQ04656 1500 aa17.14■□□□□ 0.34
CCNI-201ENST00000237654 NEURL4Q96JN8 1562 aa17.14■□□□□ 0.33
CCNI-201ENST00000237654 ELL2O00472 640 aaPredicted RBP17.14■□□□□ 0.33
CCNI-201ENST00000237654 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
CCNI-201ENST00000237654 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
CCNI-201ENST00000237654 THUMPD2Q9BTF0 503 aaKnown RBP17.14■□□□□ 0.33
CCNI-201ENST00000237654 C22orf23Q9BZE7 217 aa17.14■□□□□ 0.33
CCNI-201ENST00000237654 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
CCNI-201ENST00000237654 MROH2AA6NES4 1674 aa17.13■□□□□ 0.33
CCNI-201ENST00000237654 TMEM57Q8N5G2 664 aa17.13■□□□□ 0.33
CCNI-201ENST00000237654 MINK1Q8N4C8 1332 aaPredicted RBP17.13■□□□□ 0.33
CCNI-201ENST00000237654 MYH16Q9H6N6 1097 aa17.13■□□□□ 0.33
CCNI-201ENST00000237654 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
CCNI-201ENST00000237654 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
CCNI-201ENST00000237654 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
CCNI-201ENST00000237654 RTEL1-TNFRSF6BF6WH68 1400 aa17.12■□□□□ 0.33
CCNI-201ENST00000237654 SHROOM2Q13796 1616 aa17.12■□□□□ 0.33
CCNI-201ENST00000237654 TET3O43151 1660 aa17.12■□□□□ 0.33
CCNI-201ENST00000237654 TMPOP42166 694 aaKnown RBP17.11■□□□□ 0.33
CCNI-201ENST00000237654 RIPK4P57078 832 aa17.11■□□□□ 0.33
CCNI-201ENST00000237654 RAPGEF3O95398 923 aa17.1■□□□□ 0.33
CCNI-201ENST00000237654 XRCC6P12956 609 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCNI-201ENST00000237654 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
CCNI-201ENST00000237654 IQSEC2Q5JU85 1478 aa17.09■□□□□ 0.33
CCNI-201ENST00000237654 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.08■□□□□ 0.33
CCNI-201ENST00000237654 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.32
CCNI-201ENST00000237654 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
CCNI-201ENST00000237654 DEPDC5O75140 1603 aa17.08■□□□□ 0.32
CCNI-201ENST00000237654 MCM4P33991 863 aa17.07■□□□□ 0.32
CCNI-201ENST00000237654 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
CCNI-201ENST00000237654 HMOX1P09601 288 aa17.07■□□□□ 0.32
CCNI-201ENST00000237654 ATF7IPQ6VMQ6 1270 aa17.07■□□□□ 0.32
CCNI-201ENST00000237654 PLEKHF1Q96S99 279 aa17.07■□□□□ 0.32
CCNI-201ENST00000237654 NPATQ14207 1427 aa17.07■□□□□ 0.32
CCNI-201ENST00000237654 EVC2Q86UK5 1308 aa17.07■□□□□ 0.32
CCNI-201ENST00000237654 AAMPQ13685 434 aa17.06■□□□□ 0.32
CCNI-201ENST00000237654 MYOM2P54296 1465 aa17.06■□□□□ 0.32
CCNI-201ENST00000237654 PPRC1Q5VV67 1664 aaKnown RBP17.06■□□□□ 0.32
CCNI-201ENST00000237654 SLC24A1O60721 1099 aa17.06■□□□□ 0.32
CCNI-201ENST00000237654 RBM42Q9BTD8 480 aaKnown RBP17.06■□□□□ 0.32
CCNI-201ENST00000237654 KIF1BO60333 1816 aa17.05■□□□□ 0.32
CCNI-201ENST00000237654 A0A1W2PP64 1363 aa17.05■□□□□ 0.32
CCNI-201ENST00000237654 FYB1O15117 783 aa17.05■□□□□ 0.32
CCNI-201ENST00000237654 MYO3AQ8NEV4 1616 aa17.04■□□□□ 0.32
CCNI-201ENST00000237654 TRAK2O60296 914 aa17.04■□□□□ 0.32
CCNI-201ENST00000237654 CD2BP2O95400 341 aaKnown RBP17.04■□□□□ 0.32
CCNI-201ENST00000237654 CCDC27Q2M243 656 aa17.04■□□□□ 0.32
CCNI-201ENST00000237654 IDI1Q13907 227 aa17.03■□□□□ 0.32
CCNI-201ENST00000237654 VWDEQ8N2E2 1590 aa17.03■□□□□ 0.32
CCNI-201ENST00000237654 TSPYL6Q8N831 410 aa17.03■□□□□ 0.32
CCNI-201ENST00000237654 PRAM1Q96QH2 718 aa17.03■□□□□ 0.32
CCNI-201ENST00000237654 GOLGA6L3A6NEY3 463 aa17.02■□□□□ 0.31
CCNI-201ENST00000237654 ANKRD45Q5TZF3 282 aa17.02■□□□□ 0.31
CCNI-201ENST00000237654 SBNO2Q9Y2G9 1366 aa17.02■□□□□ 0.31
CCNI-201ENST00000237654 QRICH2Q9H0J4 1663 aa17.01■□□□□ 0.31
CCNI-201ENST00000237654 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
CCNI-201ENST00000237654 ZBTB40Q9NUA8 1239 aa17.01■□□□□ 0.31
CCNI-201ENST00000237654 EFCAB6Q5THR3 1501 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms