RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.31□□□□□ -1.08
SGIP1-201ENST00000237247 BRPF3Q9ULD4 1205 aa8.31□□□□□ -1.08
SGIP1-201ENST00000237247 TULP4Q9NRJ4 1543 aa8.31□□□□□ -1.08
SGIP1-201ENST00000237247 RRP1P56182 461 aaKnown RBP8.31□□□□□ -1.08
SGIP1-201ENST00000237247 PLEKHD1A6NEE1 506 aa8.3□□□□□ -1.08
SGIP1-201ENST00000237247 CFDP1Q9UEE9 299 aaPredicted RBP8.3□□□□□ -1.08
SGIP1-201ENST00000237247 PRDM4Q9UKN5 801 aa8.3□□□□□ -1.08
SGIP1-201ENST00000237247 CALD1Q05682 793 aaKnown RBP8.29□□□□□ -1.08
SGIP1-201ENST00000237247 CAMTA1Q9Y6Y1 1673 aa8.29□□□□□ -1.08
SGIP1-201ENST00000237247 VIRMAQ69YN4 1812 aaKnown RBP8.29□□□□□ -1.08
SGIP1-201ENST00000237247 PKD2Q13563 968 aa8.29□□□□□ -1.08
SGIP1-201ENST00000237247 NLRP1Q9C000 1473 aa8.29□□□□□ -1.08
SGIP1-201ENST00000237247 HSP90AA2PQ14568 343 aaPredicted RBP8.29□□□□□ -1.08
SGIP1-201ENST00000237247 ALKQ9UM73 1620 aa8.29□□□□□ -1.08
SGIP1-201ENST00000237247 ZNF326Q5BKZ1 582 aaKnown RBP8.29□□□□□ -1.08
SGIP1-201ENST00000237247 NLRP13Q86W25 1043 aa8.29□□□□□ -1.08
SGIP1-201ENST00000237247 CDC42BPGQ6DT37 1551 aa8.28□□□□□ -1.08
SGIP1-201ENST00000237247 NUP155O75694 1391 aa8.28□□□□□ -1.08
SGIP1-201ENST00000237247 TECPR2O15040 1411 aa8.28□□□□□ -1.08
SGIP1-201ENST00000237247 CD163L1Q9NR16 1453 aa8.28□□□□□ -1.08
SGIP1-201ENST00000237247 SBNO2Q9Y2G9 1366 aa8.27□□□□□ -1.08
SGIP1-201ENST00000237247 TMC1Q8TDI8 760 aa8.27□□□□□ -1.09
SGIP1-201ENST00000237247 A2ML1A8K2U0 1454 aa8.27□□□□□ -1.09
SGIP1-201ENST00000237247 CEP170BQ9Y4F5 1589 aaPredicted RBP8.27□□□□□ -1.09
SGIP1-201ENST00000237247 STRCQ7RTU9 1775 aa8.26□□□□□ -1.09
SGIP1-201ENST00000237247 HNRNPMP52272 730 aaKnown RBP eCLIP8.26□□□□□ -1.09
SGIP1-201ENST00000237247 GSE1Q14687 1217 aa8.26□□□□□ -1.09
SGIP1-201ENST00000237247 ZBTB47Q9UFB7 747 aaPredicted RBP8.26□□□□□ -1.09
SGIP1-201ENST00000237247 NEFMP07197 916 aa8.26□□□□□ -1.09
SGIP1-201ENST00000237247 FMN2Q9NZ56 1722 aa8.26□□□□□ -1.09
SGIP1-201ENST00000237247 CARD11Q9BXL7 1154 aa8.26□□□□□ -1.09
SGIP1-201ENST00000237247 PPM1GO15355 546 aaPredicted RBP8.25□□□□□ -1.09
SGIP1-201ENST00000237247 RCAN3Q9UKA8 241 aa8.25□□□□□ -1.09
SGIP1-201ENST00000237247 BACH2Q9BYV9 841 aa8.25□□□□□ -1.09
SGIP1-201ENST00000237247 TRPM3Q9HCF6 1732 aaPredicted RBP8.25□□□□□ -1.09
SGIP1-201ENST00000237247 PER1O15534 1290 aaPredicted RBP8.24□□□□□ -1.09
SGIP1-201ENST00000237247 NPC1L1Q9UHC9 1359 aa8.24□□□□□ -1.09
SGIP1-201ENST00000237247 CCDC144AA2RUR9 1427 aa8.24□□□□□ -1.09
SGIP1-201ENST00000237247 DDRGK1Q96HY6 314 aa8.23□□□□□ -1.09
SGIP1-201ENST00000237247 EIF3AQ14152 1382 aaKnown RBP8.23□□□□□ -1.09
SGIP1-201ENST00000237247 N4BP2Q86UW6 1770 aaPredicted RBP8.23□□□□□ -1.09
SGIP1-201ENST00000237247 LMO7Q8WWI1 1683 aa8.22□□□□□ -1.09
SGIP1-201ENST00000237247 ST20-MTHFSA0A0A6YYL1 179 aa8.22□□□□□ -1.09
SGIP1-201ENST00000237247 ITSN1Q15811 1721 aa8.22□□□□□ -1.09
SGIP1-201ENST00000237247 PDE4AP27815 886 aa8.21□□□□□ -1.09
SGIP1-201ENST00000237247 RGPD8O14715 1765 aaPredicted RBP8.21□□□□□ -1.09
SGIP1-201ENST00000237247 EFCAB2Q5VUJ9 269 aa8.21□□□□□ -1.09
SGIP1-201ENST00000237247 STAC3Q96MF2 364 aa8.21□□□□□ -1.09
SGIP1-201ENST00000237247 KDM2BQ8NHM5 1336 aa8.21□□□□□ -1.1
SGIP1-201ENST00000237247 HSP90AA1P07900 732 aaKnown RBP8.21□□□□□ -1.1
SGIP1-201ENST00000237247 FBLN2P98095 1184 aa8.21□□□□□ -1.1
SGIP1-201ENST00000237247 ADAMTS7Q9UKP4 1686 aa8.21□□□□□ -1.1
SGIP1-201ENST00000237247 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
SGIP1-201ENST00000237247 TESK2Q96S53 571 aa8.2□□□□□ -1.1
SGIP1-201ENST00000237247 ZMYM3Q14202 1370 aa8.2□□□□□ -1.1
SGIP1-201ENST00000237247 EXOC6Q8TAG9 804 aa8.2□□□□□ -1.1
SGIP1-201ENST00000237247 TSPY4P0CV99 314 aa8.2□□□□□ -1.1
SGIP1-201ENST00000237247 TSPY10P0CW01 314 aa8.2□□□□□ -1.1
SGIP1-201ENST00000237247 ABCA3Q99758 1704 aa8.19□□□□□ -1.1
SGIP1-201ENST00000237247 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
SGIP1-201ENST00000237247 ZNF521Q96K83 1311 aa8.19□□□□□ -1.1
SGIP1-201ENST00000237247 COL3A1P02461 1466 aaPredicted RBP8.19□□□□□ -1.1
SGIP1-201ENST00000237247 NINLQ9Y2I6 1382 aa8.19□□□□□ -1.1
SGIP1-201ENST00000237247 BRD2P25440 801 aaKnown RBP8.19□□□□□ -1.1
SGIP1-201ENST00000237247 DISP3Q9P2K9 1392 aa8.19□□□□□ -1.1
SGIP1-201ENST00000237247 PIK3C2AO00443 1686 aa8.18□□□□□ -1.1
SGIP1-201ENST00000237247 CFAP65Q6ZU64 1925 aaKnown RBP8.18□□□□□ -1.1
SGIP1-201ENST00000237247 AFAP1Q8N556 730 aa8.18□□□□□ -1.1
SGIP1-201ENST00000237247 NGEFQ8N5V2 710 aa8.18□□□□□ -1.1
SGIP1-201ENST00000237247 SCAF11Q99590 1463 aaKnown RBP8.18□□□□□ -1.1
SGIP1-201ENST00000237247 LRRC37A3O60309 1634 aa8.18□□□□□ -1.1
SGIP1-201ENST00000237247 MST1RQ04912 1400 aa8.18□□□□□ -1.1
SGIP1-201ENST00000237247 PDCL3Q9H2J4 239 aa8.18□□□□□ -1.1
SGIP1-201ENST00000237247 GTF2E1P29083 439 aaPredicted RBP8.17□□□□□ -1.1
SGIP1-201ENST00000237247 CENPQQ7L2Z9 268 aaPredicted RBP8.17□□□□□ -1.1
SGIP1-201ENST00000237247 AEBP2Q6ZN18 517 aaPredicted RBP8.17□□□□□ -1.1
SGIP1-201ENST00000237247 PEAK1Q9H792 1746 aa8.17□□□□□ -1.1
SGIP1-201ENST00000237247 ALS2Q96Q42 1657 aa8.16□□□□□ -1.1
SGIP1-201ENST00000237247 DCAF11Q8TEB1 546 aa8.16□□□□□ -1.1
SGIP1-201ENST00000237247 ADAMTS13Q76LX8 1427 aa8.16□□□□□ -1.1
SGIP1-201ENST00000237247 TMF1P82094 1093 aa8.15□□□□□ -1.1
SGIP1-201ENST00000237247 TRMT2AQ8IZ69 625 aaKnown RBP8.15□□□□□ -1.1
SGIP1-201ENST00000237247 PPP6R1Q9UPN7 881 aa8.15□□□□□ -1.1
SGIP1-201ENST00000237247 IQSEC2Q5JU85 1478 aa8.15□□□□□ -1.1
SGIP1-201ENST00000237247 SIPA1L3O60292 1781 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-201ENST00000237247 CLCN1P35523 988 aa8.14□□□□□ -1.11
SGIP1-201ENST00000237247 RRAGDQ9NQL2 400 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-201ENST00000237247 CHRM1P11229 460 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-201ENST00000237247 FRAT1Q92837 279 aaPredicted RBP8.14□□□□□ -1.11
SGIP1-201ENST00000237247 ARID3CA6NKF2 412 aa8.13□□□□□ -1.11
SGIP1-201ENST00000237247 BBXQ8WY36 941 aaPredicted RBP8.13□□□□□ -1.11
SGIP1-201ENST00000237247 NAP1L5Q96NT1 182 aaPredicted RBP8.13□□□□□ -1.11
SGIP1-201ENST00000237247 SPAG9O60271 1321 aaKnown RBP8.13□□□□□ -1.11
SGIP1-201ENST00000237247 CDCA8Q53HL2 280 aa8.13□□□□□ -1.11
SGIP1-201ENST00000237247 ZNF777Q9ULD5 760 aaPredicted RBP8.13□□□□□ -1.11
SGIP1-201ENST00000237247 WNK3Q9BYP7 1800 aa8.13□□□□□ -1.11
SGIP1-201ENST00000237247 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.12□□□□□ -1.11
SGIP1-201ENST00000237247 CRBNQ96SW2 442 aa8.12□□□□□ -1.11
SGIP1-201ENST00000237247 NKTRP30414 1462 aaKnown RBP8.12□□□□□ -1.11
SGIP1-201ENST00000237247 COL18A1P39060 1754 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms