RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 KDM5AP29375 1690 aaKnown RBP20.4■□□□□ 0.86
CTSD-201ENST00000236671 HSPA2P54652 639 aa20.39■□□□□ 0.86
CTSD-201ENST00000236671 PIK3C2BO00750 1634 aa20.39■□□□□ 0.86
CTSD-201ENST00000236671 KDM2BQ8NHM5 1336 aa20.39■□□□□ 0.85
CTSD-201ENST00000236671 AEBP2Q6ZN18 517 aaPredicted RBP20.38■□□□□ 0.85
CTSD-201ENST00000236671 SKAP1Q86WV1 359 aa20.38■□□□□ 0.85
CTSD-201ENST00000236671 CHGAP10645 457 aaKnown RBP20.37■□□□□ 0.85
CTSD-201ENST00000236671 GOLGA2Q08379 1002 aa20.37■□□□□ 0.85
CTSD-201ENST00000236671 MYOM2P54296 1465 aa20.36■□□□□ 0.85
CTSD-201ENST00000236671 RTL5Q5HYW3 569 aaPredicted RBP20.35■□□□□ 0.85
CTSD-201ENST00000236671 CEP170BQ9Y4F5 1589 aaPredicted RBP20.35■□□□□ 0.85
CTSD-201ENST00000236671 LMTK3Q96Q04 1460 aa20.35■□□□□ 0.85
CTSD-201ENST00000236671 NUTM2DQ5VT03 806 aaPredicted RBP20.33■□□□□ 0.85
CTSD-201ENST00000236671 UBR1Q8IWV7 1749 aa20.33■□□□□ 0.84
CTSD-201ENST00000236671 SLFN5Q08AF3 891 aa20.33■□□□□ 0.84
CTSD-201ENST00000236671 CENPQQ7L2Z9 268 aaPredicted RBP20.32■□□□□ 0.84
CTSD-201ENST00000236671 TRMT2AQ8IZ69 625 aaKnown RBP20.32■□□□□ 0.84
CTSD-201ENST00000236671 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
CTSD-201ENST00000236671 ZNF142P52746 1687 aaPredicted RBP20.3■□□□□ 0.84
CTSD-201ENST00000236671 TMEM131LA2VDJ0 1609 aa20.29■□□□□ 0.84
CTSD-201ENST00000236671 KIF1BO60333 1816 aa20.29■□□□□ 0.84
CTSD-201ENST00000236671 CFAP70Q5T0N1 1121 aa20.29■□□□□ 0.84
CTSD-201ENST00000236671 CCDC146Q8IYE0 955 aa20.29■□□□□ 0.84
CTSD-201ENST00000236671 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
CTSD-201ENST00000236671 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
CTSD-201ENST00000236671 ADGRF5Q8IZF2 1346 aa20.28■□□□□ 0.84
CTSD-201ENST00000236671 NKTRP30414 1462 aaKnown RBP20.27■□□□□ 0.84
CTSD-201ENST00000236671 NRXN1Q9ULB1 1477 aa20.27■□□□□ 0.84
CTSD-201ENST00000236671 A2ML1A8K2U0 1454 aa20.27■□□□□ 0.84
CTSD-201ENST00000236671 NLRP1Q9C000 1473 aa20.27■□□□□ 0.84
CTSD-201ENST00000236671 SPINK5Q9NQ38 1064 aaPredicted RBP20.27■□□□□ 0.84
CTSD-201ENST00000236671 SLC24A1O60721 1099 aa20.26■□□□□ 0.83
CTSD-201ENST00000236671 SLC52A1Q9NWF4 448 aa20.26■□□□□ 0.83
CTSD-201ENST00000236671 ADGRB3O60242 1522 aa20.26■□□□□ 0.83
CTSD-201ENST00000236671 CARD14Q9BXL6 1004 aa20.26■□□□□ 0.83
CTSD-201ENST00000236671 LAS1LQ9Y4W2 734 aaKnown RBP20.26■□□□□ 0.83
CTSD-201ENST00000236671 APAF1O14727 1248 aa20.25■□□□□ 0.83
CTSD-201ENST00000236671 DDRGK1Q96HY6 314 aa20.24■□□□□ 0.83
CTSD-201ENST00000236671 SBNO2Q9Y2G9 1366 aa20.24■□□□□ 0.83
CTSD-201ENST00000236671 USP35Q9P2H5 1018 aa20.22■□□□□ 0.83
CTSD-201ENST00000236671 LTKP29376 864 aa20.21■□□□□ 0.83
CTSD-201ENST00000236671 E9PSI1 815 aa20.21■□□□□ 0.83
CTSD-201ENST00000236671 NEFMP07197 916 aa20.2■□□□□ 0.82
CTSD-201ENST00000236671 SETBP1Q9Y6X0 1596 aa20.2■□□□□ 0.82
CTSD-201ENST00000236671 PPM1GO15355 546 aaPredicted RBP20.2■□□□□ 0.82
CTSD-201ENST00000236671 C8orf34Q49A92 452 aa20.2■□□□□ 0.82
CTSD-201ENST00000236671 STRCQ7RTU9 1775 aa20.2■□□□□ 0.82
CTSD-201ENST00000236671 NCKAP5LQ9HCH0 1330 aa20.2■□□□□ 0.82
CTSD-201ENST00000236671 POLR3AO14802 1390 aaPredicted RBP20.19■□□□□ 0.82
CTSD-201ENST00000236671 FAM161AQ3B820 660 aa20.19■□□□□ 0.82
CTSD-201ENST00000236671 NGEFQ8N5V2 710 aa20.19■□□□□ 0.82
CTSD-201ENST00000236671 DMRT2Q9Y5R5 561 aa20.19■□□□□ 0.82
CTSD-201ENST00000236671 BCAR3O75815 825 aa20.18■□□□□ 0.82
CTSD-201ENST00000236671 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
CTSD-201ENST00000236671 TMEM2Q9UHN6 1383 aa20.16■□□□□ 0.82
CTSD-201ENST00000236671 SHPRHQ149N8 1683 aa20.16■□□□□ 0.82
CTSD-201ENST00000236671 NEXMIFQ5QGS0 1516 aa20.15■□□□□ 0.82
CTSD-201ENST00000236671 CENPJQ9HC77 1338 aaPredicted RBP20.15■□□□□ 0.82
CTSD-201ENST00000236671 PPLO60437 1756 aa20.15■□□□□ 0.82
CTSD-201ENST00000236671 ZFYVE9O95405 1425 aa20.14■□□□□ 0.82
CTSD-201ENST00000236671 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.82
CTSD-201ENST00000236671 NSD3Q9BZ95 1437 aa20.14■□□□□ 0.81
CTSD-201ENST00000236671 TXNDC2Q86VQ3 553 aa20.14■□□□□ 0.81
CTSD-201ENST00000236671 ADGRB1O14514 1584 aa20.12■□□□□ 0.81
CTSD-201ENST00000236671 QRICH2Q9H0J4 1663 aa20.12■□□□□ 0.81
CTSD-201ENST00000236671 SLIT1O75093 1534 aa20.12■□□□□ 0.81
CTSD-201ENST00000236671 NINLQ9Y2I6 1382 aa20.12■□□□□ 0.81
CTSD-201ENST00000236671 ARHGAP23Q9P227 1491 aa20.11■□□□□ 0.81
CTSD-201ENST00000236671 WWC1Q8IX03 1113 aa20.11■□□□□ 0.81
CTSD-201ENST00000236671 RGS3P49796 1198 aa20.11■□□□□ 0.81
CTSD-201ENST00000236671 IQSEC2Q5JU85 1478 aa20.1■□□□□ 0.81
CTSD-201ENST00000236671 USP32Q8NFA0 1604 aa20.1■□□□□ 0.81
CTSD-201ENST00000236671 PDE3AQ14432 1141 aa20.1■□□□□ 0.81
CTSD-201ENST00000236671 CGNL1Q0VF96 1302 aa20.09■□□□□ 0.81
CTSD-201ENST00000236671 SLC4A3P48751 1232 aa20.08■□□□□ 0.8
CTSD-201ENST00000236671 ANKLE2Q86XL3 938 aa20.08■□□□□ 0.8
CTSD-201ENST00000236671 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.8
CTSD-201ENST00000236671 C14orf93Q9H972 538 aaKnown RBP20.08■□□□□ 0.8
CTSD-201ENST00000236671 IGHDP01880 384 aa20.07■□□□□ 0.8
CTSD-201ENST00000236671 MORC1Q86VD1 984 aa20.07■□□□□ 0.8
CTSD-201ENST00000236671 VIRMAQ69YN4 1812 aaKnown RBP20.07■□□□□ 0.8
CTSD-201ENST00000236671 TRAK1Q9UPV9 953 aa20.06■□□□□ 0.8
CTSD-201ENST00000236671 SLC12A5Q9H2X9 1139 aa20.06■□□□□ 0.8
CTSD-201ENST00000236671 EID1Q9Y6B2 187 aa20.05■□□□□ 0.8
CTSD-201ENST00000236671 NRXN3Q9Y4C0 1643 aa20.05■□□□□ 0.8
CTSD-201ENST00000236671 RUNDC1Q96C34 613 aa20.05■□□□□ 0.8
CTSD-201ENST00000236671 PHF23Q9BUL5 403 aaPredicted RBP20.05■□□□□ 0.8
CTSD-201ENST00000236671 CLUAP1Q96AJ1 413 aa20.04■□□□□ 0.8
CTSD-201ENST00000236671 PANK1Q8TE04 598 aa20.03■□□□□ 0.8
CTSD-201ENST00000236671 NFKBIBQ15653 356 aa20.03■□□□□ 0.8
CTSD-201ENST00000236671 DAXXQ9UER7 740 aaPredicted RBP20.03■□□□□ 0.8
CTSD-201ENST00000236671 TNNT2P45379 298 aaPredicted RBP20.02■□□□□ 0.8
CTSD-201ENST00000236671 COG6Q9Y2V7 657 aa20.02■□□□□ 0.79
CTSD-201ENST00000236671 CANXP27824 592 aaKnown RBP20.01■□□□□ 0.79
CTSD-201ENST00000236671 RRP7AQ9Y3A4 280 aaKnown RBP20.01■□□□□ 0.79
CTSD-201ENST00000236671 NPHP4O75161 1426 aaPredicted RBP20.01■□□□□ 0.79
CTSD-201ENST00000236671 RPGRIP1LQ68CZ1 1315 aa20.01■□□□□ 0.79
CTSD-201ENST00000236671 TMEM132EQ6IEE7 984 aa20■□□□□ 0.79
CTSD-201ENST00000236671 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
CTSD-201ENST00000236671 RARSP54136 660 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms