RNA–Protein interactions for RNA: ENST00000236255.4

GRHL3-201, Transcript of grainyhead like transcription factor 3, humanhuman

TSL 1 (best) BASIC

Gene GRHL3, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRHL3-201ENST00000236255 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
GRHL3-201ENST00000236255 RCAN3Q9UKA8 241 aa16.88■□□□□ 0.29
GRHL3-201ENST00000236255 ALKQ9UM73 1620 aa16.88■□□□□ 0.29
GRHL3-201ENST00000236255 CABP2Q9NPB3 220 aa16.86■□□□□ 0.29
GRHL3-201ENST00000236255 SETD1AO15047 1707 aaKnown RBP16.86■□□□□ 0.29
GRHL3-201ENST00000236255 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
GRHL3-201ENST00000236255 A2ML1A8K2U0 1454 aa16.84■□□□□ 0.29
GRHL3-201ENST00000236255 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
GRHL3-201ENST00000236255 EVC2Q86UK5 1308 aa16.84■□□□□ 0.29
GRHL3-201ENST00000236255 YTHDC2Q9H6S0 1430 aaKnown RBP16.84■□□□□ 0.29
GRHL3-201ENST00000236255 ZNF521Q96K83 1311 aa16.82■□□□□ 0.28
GRHL3-201ENST00000236255 EXOC6Q8TAG9 804 aa16.82■□□□□ 0.28
GRHL3-201ENST00000236255 MINK1Q8N4C8 1332 aaPredicted RBP16.81■□□□□ 0.28
GRHL3-201ENST00000236255 PLIN1O60240 522 aa16.81■□□□□ 0.28
GRHL3-201ENST00000236255 MORC1Q86VD1 984 aa16.81■□□□□ 0.28
GRHL3-201ENST00000236255 PRAM1Q96QH2 718 aa16.81■□□□□ 0.28
GRHL3-201ENST00000236255 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
GRHL3-201ENST00000236255 NRXN3Q9Y4C0 1643 aa16.8■□□□□ 0.28
GRHL3-201ENST00000236255 ANKRD36BQ8N2N9 1353 aa16.8■□□□□ 0.28
GRHL3-201ENST00000236255 ERICH6Q7L0X2 663 aa16.8■□□□□ 0.28
GRHL3-201ENST00000236255 RIMS2Q9UQ26 1411 aa16.79■□□□□ 0.28
GRHL3-201ENST00000236255 APAF1O14727 1248 aa16.79■□□□□ 0.28
GRHL3-201ENST00000236255 CCDC136Q96JN2 1154 aa16.79■□□□□ 0.28
GRHL3-201ENST00000236255 POLR3AO14802 1390 aaPredicted RBP16.79■□□□□ 0.28
GRHL3-201ENST00000236255 A0A1W2PP64 1363 aa16.78■□□□□ 0.28
GRHL3-201ENST00000236255 DUSP27Q5VZP5 1158 aa16.78■□□□□ 0.28
GRHL3-201ENST00000236255 SPINK5Q9NQ38 1064 aaPredicted RBP16.78■□□□□ 0.28
GRHL3-201ENST00000236255 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
GRHL3-201ENST00000236255 CD163L1Q9NR16 1453 aa16.77■□□□□ 0.28
GRHL3-201ENST00000236255 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.27
GRHL3-201ENST00000236255 SRPK2P78362 688 aaKnown RBP16.76■□□□□ 0.27
GRHL3-201ENST00000236255 PUS7Q96PZ0 661 aaKnown RBP16.76■□□□□ 0.27
GRHL3-201ENST00000236255 CGNL1Q0VF96 1302 aa16.76■□□□□ 0.27
GRHL3-201ENST00000236255 ANKRD26Q9UPS8 1709 aa16.75■□□□□ 0.27
GRHL3-201ENST00000236255 MSH5O43196 834 aa16.75■□□□□ 0.27
GRHL3-201ENST00000236255 POGKQ9P215 609 aa16.75■□□□□ 0.27
GRHL3-201ENST00000236255 ZMYM3Q14202 1370 aa16.75■□□□□ 0.27
GRHL3-201ENST00000236255 GOLGA2Q08379 1002 aa16.73■□□□□ 0.27
GRHL3-201ENST00000236255 MTHFSP49914 203 aa16.73■□□□□ 0.27
GRHL3-201ENST00000236255 SLFN5Q08AF3 891 aa16.73■□□□□ 0.27
GRHL3-201ENST00000236255 C20orf194Q5TEA3 1177 aa16.73■□□□□ 0.27
GRHL3-201ENST00000236255 WAPLQ7Z5K2 1190 aa16.73■□□□□ 0.27
GRHL3-201ENST00000236255 KIF20BQ96Q89 1820 aa16.72■□□□□ 0.27
GRHL3-201ENST00000236255 ABCC11Q96J66 1382 aa16.72■□□□□ 0.27
GRHL3-201ENST00000236255 UBR1Q8IWV7 1749 aa16.71■□□□□ 0.27
GRHL3-201ENST00000236255 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
GRHL3-201ENST00000236255 DLC1Q96QB1 1528 aa16.71■□□□□ 0.27
GRHL3-201ENST00000236255 CRBNQ96SW2 442 aa16.71■□□□□ 0.27
GRHL3-201ENST00000236255 TRMT2AQ8IZ69 625 aaKnown RBP16.7■□□□□ 0.26
GRHL3-201ENST00000236255 CDK19Q9BWU1 502 aa16.7■□□□□ 0.26
GRHL3-201ENST00000236255 GGNBP2Q9H3C7 697 aa16.7■□□□□ 0.26
GRHL3-201ENST00000236255 NLRP1Q9C000 1473 aa16.7■□□□□ 0.26
GRHL3-201ENST00000236255 NSD2O96028 1365 aa16.69■□□□□ 0.26
GRHL3-201ENST00000236255 METP08581 1390 aa16.69■□□□□ 0.26
GRHL3-201ENST00000236255 ATAD2Q6PL18 1390 aa16.69■□□□□ 0.26
GRHL3-201ENST00000236255 RRP7AQ9Y3A4 280 aaKnown RBP16.69■□□□□ 0.26
GRHL3-201ENST00000236255 NINLQ9Y2I6 1382 aa16.68■□□□□ 0.26
GRHL3-201ENST00000236255 TNRQ92752 1358 aa16.67■□□□□ 0.26
GRHL3-201ENST00000236255 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
GRHL3-201ENST00000236255 KNDC1Q76NI1 1749 aa16.66■□□□□ 0.26
GRHL3-201ENST00000236255 CABP1Q9NZU7 370 aa16.66■□□□□ 0.26
GRHL3-201ENST00000236255 COL3A1P02461 1466 aaPredicted RBP16.66■□□□□ 0.26
GRHL3-201ENST00000236255 FYB1O15117 783 aa16.65■□□□□ 0.26
GRHL3-201ENST00000236255 NEUROD2Q15784 382 aa16.65■□□□□ 0.26
GRHL3-201ENST00000236255 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
GRHL3-201ENST00000236255 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
GRHL3-201ENST00000236255 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
GRHL3-201ENST00000236255 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
GRHL3-201ENST00000236255 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
GRHL3-201ENST00000236255 TXNDC2Q86VQ3 553 aa16.63■□□□□ 0.25
GRHL3-201ENST00000236255 TERF2IPQ9NYB0 399 aa16.63■□□□□ 0.25
GRHL3-201ENST00000236255 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
GRHL3-201ENST00000236255 C3P01024 1663 aa16.62■□□□□ 0.25
GRHL3-201ENST00000236255 E9PSI1 815 aa16.61■□□□□ 0.25
GRHL3-201ENST00000236255 BCAR3O75815 825 aa16.61■□□□□ 0.25
GRHL3-201ENST00000236255 CEBPAP49715 358 aaPredicted RBP16.61■□□□□ 0.25
GRHL3-201ENST00000236255 SKAP1Q86WV1 359 aa16.61■□□□□ 0.25
GRHL3-201ENST00000236255 MED14O60244 1454 aa16.61■□□□□ 0.25
GRHL3-201ENST00000236255 CPS1P31327 1500 aa16.6■□□□□ 0.25
GRHL3-201ENST00000236255 NCKAP5LQ9HCH0 1330 aa16.6■□□□□ 0.25
GRHL3-201ENST00000236255 FBLN1P23142 703 aa16.6■□□□□ 0.25
GRHL3-201ENST00000236255 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
GRHL3-201ENST00000236255 U2AF1L5P0DN76 240 aaPredicted RBP16.59■□□□□ 0.25
GRHL3-201ENST00000236255 U2AF1Q01081 240 aaKnown RBP eCLIP16.59■□□□□ 0.25
GRHL3-201ENST00000236255 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
GRHL3-201ENST00000236255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.25
GRHL3-201ENST00000236255 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.59■□□□□ 0.25
GRHL3-201ENST00000236255 ATP7BP35670 1465 aa16.59■□□□□ 0.25
GRHL3-201ENST00000236255 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
GRHL3-201ENST00000236255 MAP2P11137 1827 aaKnown RBP16.58■□□□□ 0.25
GRHL3-201ENST00000236255 ADAMTS13Q76LX8 1427 aa16.57■□□□□ 0.24
GRHL3-201ENST00000236255 FER1L4A9Z1Z3 1794 aa16.57■□□□□ 0.24
GRHL3-201ENST00000236255 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
GRHL3-201ENST00000236255 MON2Q7Z3U7 1717 aa16.57■□□□□ 0.24
GRHL3-201ENST00000236255 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.57■□□□□ 0.24
GRHL3-201ENST00000236255 AKAP12Q02952 1782 aa16.57■□□□□ 0.24
GRHL3-201ENST00000236255 PPIP5K1Q6PFW1 1433 aa16.57■□□□□ 0.24
GRHL3-201ENST00000236255 WASLO00401 505 aaPredicted RBP16.56■□□□□ 0.24
GRHL3-201ENST00000236255 TECPR2O15040 1411 aa16.56■□□□□ 0.24
GRHL3-201ENST00000236255 U2SURPO15042 1029 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms