RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 ANKRD30BQ9BXX2 1392 aa20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 IFT140Q96RY7 1462 aa20.98■□□□□ 0.95
SLC1A4-201ENST00000234256 IFIT2P09913 472 aaKnown RBP20.97■□□□□ 0.95
SLC1A4-201ENST00000234256 HSP90AA2PQ14568 343 aaPredicted RBP20.97■□□□□ 0.95
SLC1A4-201ENST00000234256 VPS37CA5D8V6 355 aaPredicted RBP20.97■□□□□ 0.95
SLC1A4-201ENST00000234256 PSME1Q06323 249 aa20.97■□□□□ 0.95
SLC1A4-201ENST00000234256 ZNF428Q96B54 188 aa20.97■□□□□ 0.95
SLC1A4-201ENST00000234256 NEXNQ0ZGT2 675 aa20.96■□□□□ 0.95
SLC1A4-201ENST00000234256 TXNDC2Q86VQ3 553 aa20.96■□□□□ 0.95
SLC1A4-201ENST00000234256 AIMP1Q12904 312 aaKnown RBP20.96■□□□□ 0.95
SLC1A4-201ENST00000234256 EHBP1L1Q8N3D4 1523 aa20.96■□□□□ 0.95
SLC1A4-201ENST00000234256 SYNJ2O15056 1496 aa20.96■□□□□ 0.95
SLC1A4-201ENST00000234256 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
SLC1A4-201ENST00000234256 TWISTNBQ3B726 338 aaPredicted RBP20.96■□□□□ 0.95
SLC1A4-201ENST00000234256 RAPGEF3O95398 923 aa20.95■□□□□ 0.94
SLC1A4-201ENST00000234256 TRAK2O60296 914 aa20.94■□□□□ 0.94
SLC1A4-201ENST00000234256 RNF214Q8ND24 703 aa20.94■□□□□ 0.94
SLC1A4-201ENST00000234256 ATP6V1DQ9Y5K8 247 aa20.94■□□□□ 0.94
SLC1A4-201ENST00000234256 CUL7Q14999 1698 aa20.93■□□□□ 0.94
SLC1A4-201ENST00000234256 CDC45O75419 566 aa20.93■□□□□ 0.94
SLC1A4-201ENST00000234256 ERBINQ96RT1 1412 aa20.93■□□□□ 0.94
SLC1A4-201ENST00000234256 GTF2E1P29083 439 aaPredicted RBP20.92■□□□□ 0.94
SLC1A4-201ENST00000234256 SULT6B1Q6IMI4 303 aa20.92■□□□□ 0.94
SLC1A4-201ENST00000234256 RSPH6AQ9H0K4 717 aa20.92■□□□□ 0.94
SLC1A4-201ENST00000234256 RUFY2Q8WXA3 655 aa20.92■□□□□ 0.94
SLC1A4-201ENST00000234256 EPRSP07814 1512 aaKnown RBP20.92■□□□□ 0.94
SLC1A4-201ENST00000234256 AAMPQ13685 434 aa20.92■□□□□ 0.94
SLC1A4-201ENST00000234256 WWC1Q8IX03 1113 aa20.92■□□□□ 0.94
SLC1A4-201ENST00000234256 TTC5Q8N0Z6 440 aa20.91■□□□□ 0.94
SLC1A4-201ENST00000234256 NEK4P51957 841 aa20.91■□□□□ 0.94
SLC1A4-201ENST00000234256 NUCB2P80303 420 aa20.91■□□□□ 0.94
SLC1A4-201ENST00000234256 THUMPD2Q9BTF0 503 aaKnown RBP20.91■□□□□ 0.94
SLC1A4-201ENST00000234256 SLFN5Q08AF3 891 aa20.9■□□□□ 0.94
SLC1A4-201ENST00000234256 ATF7IPQ6VMQ6 1270 aa20.9■□□□□ 0.94
SLC1A4-201ENST00000234256 KIF3AQ9Y496 699 aa20.9■□□□□ 0.94
SLC1A4-201ENST00000234256 BECN2A8MW95 431 aa20.9■□□□□ 0.94
SLC1A4-201ENST00000234256 SURF6O75683 361 aaKnown RBP20.9■□□□□ 0.94
SLC1A4-201ENST00000234256 G3BP1Q13283 466 aaKnown RBP eCLIP20.9■□□□□ 0.94
SLC1A4-201ENST00000234256 UBTFL1P0CB47 393 aaPredicted RBP20.89■□□□□ 0.94
SLC1A4-201ENST00000234256 FOSBP53539 338 aa20.89■□□□□ 0.94
SLC1A4-201ENST00000234256 CDK19Q9BWU1 502 aa20.89■□□□□ 0.93
SLC1A4-201ENST00000234256 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
SLC1A4-201ENST00000234256 SMC3Q9UQE7 1217 aa20.88■□□□□ 0.93
SLC1A4-201ENST00000234256 GOLGA6L19H0YKK7 550 aa20.87■□□□□ 0.93
SLC1A4-201ENST00000234256 SLC4A2P04920 1241 aa20.87■□□□□ 0.93
SLC1A4-201ENST00000234256 TPM4P67936 248 aa20.87■□□□□ 0.93
SLC1A4-201ENST00000234256 ROCK1Q13464 1354 aa20.87■□□□□ 0.93
SLC1A4-201ENST00000234256 MVPQ14764 893 aaKnown RBP20.87■□□□□ 0.93
SLC1A4-201ENST00000234256 PCF11O94913 1555 aaKnown RBP20.86■□□□□ 0.93
SLC1A4-201ENST00000234256 RRS1Q15050 365 aaKnown RBP20.86■□□□□ 0.93
SLC1A4-201ENST00000234256 CAVIN1Q6NZI2 390 aaKnown RBP20.86■□□□□ 0.93
SLC1A4-201ENST00000234256 BICD2Q8TD16 824 aa20.86■□□□□ 0.93
SLC1A4-201ENST00000234256 FAM13BQ9NYF5 915 aa20.86■□□□□ 0.93
SLC1A4-201ENST00000234256 HECW1Q76N89 1606 aa20.85■□□□□ 0.93
SLC1A4-201ENST00000234256 ABCC5O15440 1437 aa20.85■□□□□ 0.93
SLC1A4-201ENST00000234256 FBXW7Q969H0 707 aa20.85■□□□□ 0.93
SLC1A4-201ENST00000234256 NLRP2Q9NX02 1062 aa20.85■□□□□ 0.93
SLC1A4-201ENST00000234256 WDR63Q8IWG1 891 aa20.84■□□□□ 0.93
SLC1A4-201ENST00000234256 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
SLC1A4-201ENST00000234256 DDX58O95786 925 aaKnown RBP20.84■□□□□ 0.93
SLC1A4-201ENST00000234256 APPP05067 770 aa20.84■□□□□ 0.93
SLC1A4-201ENST00000234256 VSIG10Q8N0Z9 540 aa20.83■□□□□ 0.93
SLC1A4-201ENST00000234256 FAM43AQ8N2R8 423 aa20.83■□□□□ 0.93
SLC1A4-201ENST00000234256 CLSTN1O94985 981 aa20.83■□□□□ 0.93
SLC1A4-201ENST00000234256 ABTB2Q8N961 1025 aa20.83■□□□□ 0.92
SLC1A4-201ENST00000234256 NEUROD6Q96NK8 337 aa20.83■□□□□ 0.92
SLC1A4-201ENST00000234256 SYTL4Q96C24 671 aaPredicted RBP20.83■□□□□ 0.92
SLC1A4-201ENST00000234256 ZNF592Q92610 1267 aa20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 MRE11P49959 708 aa20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 RIC3Q7Z5B4 369 aa20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 SLC26A8Q96RN1 970 aa20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 ARHGEF11O15085 1522 aa20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 PRPF40AO75400 957 aaKnown RBP20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 NASPP49321 788 aaPredicted RBP20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 EVA1CP58658 441 aa20.82■□□□□ 0.92
SLC1A4-201ENST00000234256 PLB1Q6P1J6 1458 aa20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 RAPGEF4Q8WZA2 1011 aa20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 CCDC27Q2M243 656 aa20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 BCL11BQ9C0K0 894 aaPredicted RBP20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 TMPOP42166 694 aaKnown RBP20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 TMEM57Q8N5G2 664 aa20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 CCDC34Q96HJ3 373 aa20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
SLC1A4-201ENST00000234256 MPNDQ8N594 471 aa20.8■□□□□ 0.92
SLC1A4-201ENST00000234256 CLASRPQ8N2M8 674 aaKnown RBP20.8■□□□□ 0.92
SLC1A4-201ENST00000234256 PES1O00541 588 aaKnown RBP20.8■□□□□ 0.92
SLC1A4-201ENST00000234256 CPLX1O14810 134 aa20.8■□□□□ 0.92
SLC1A4-201ENST00000234256 GNAI3P08754 354 aa20.8■□□□□ 0.92
SLC1A4-201ENST00000234256 URB2Q14146 1524 aaKnown RBP20.79■□□□□ 0.92
SLC1A4-201ENST00000234256 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
SLC1A4-201ENST00000234256 RNF20Q5VTR2 975 aa20.79■□□□□ 0.92
SLC1A4-201ENST00000234256 GCC1Q96CN9 775 aa20.78■□□□□ 0.92
SLC1A4-201ENST00000234256 NCOA1Q15788 1441 aa20.78■□□□□ 0.92
SLC1A4-201ENST00000234256 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
SLC1A4-201ENST00000234256 SSH1Q8WYL5 1049 aa20.78■□□□□ 0.92
SLC1A4-201ENST00000234256 ERC2O15083 957 aa20.77■□□□□ 0.92
SLC1A4-201ENST00000234256 CHD1LQ86WJ1 897 aa20.77■□□□□ 0.92
SLC1A4-201ENST00000234256 HSP90AB4PQ58FF6 505 aa20.77■□□□□ 0.92
SLC1A4-201ENST00000234256 HDGFL1Q5TGJ6 251 aa20.77■□□□□ 0.92
SLC1A4-201ENST00000234256 NSD3Q9BZ95 1437 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms