RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 DHX57Q6P158 1386 aaKnown RBP20.79■□□□□ 0.92
GPN3-201ENST00000228827 NUTM2FA1L443 756 aa20.79■□□□□ 0.92
GPN3-201ENST00000228827 NUTM2BA6NNL0 878 aaPredicted RBP20.79■□□□□ 0.92
GPN3-201ENST00000228827 NUTM2EB1AL46 878 aaPredicted RBP20.79■□□□□ 0.92
GPN3-201ENST00000228827 MEX3CQ5U5Q3 659 aaKnown RBP20.79■□□□□ 0.92
GPN3-201ENST00000228827 NUTM2AQ8IVF1 878 aaPredicted RBP20.79■□□□□ 0.92
GPN3-201ENST00000228827 LRP6O75581 1613 aa20.79■□□□□ 0.92
GPN3-201ENST00000228827 LRRC59Q96AG4 307 aaKnown RBP20.78■□□□□ 0.92
GPN3-201ENST00000228827 NHSL1Q5SYE7 1610 aa20.77■□□□□ 0.92
GPN3-201ENST00000228827 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
GPN3-201ENST00000228827 ESCO1Q5FWF5 840 aa20.76■□□□□ 0.91
GPN3-201ENST00000228827 CDC42BPGQ6DT37 1551 aa20.76■□□□□ 0.91
GPN3-201ENST00000228827 SAFB2Q14151 953 aaKnown RBP eCLIP20.75■□□□□ 0.91
GPN3-201ENST00000228827 SHPRHQ149N8 1683 aa20.75■□□□□ 0.91
GPN3-201ENST00000228827 KNDC1Q76NI1 1749 aa20.75■□□□□ 0.91
GPN3-201ENST00000228827 LAMC1P11047 1609 aa20.74■□□□□ 0.91
GPN3-201ENST00000228827 SIRT1Q96EB6 747 aa20.74■□□□□ 0.91
GPN3-201ENST00000228827 PRAM1Q96QH2 718 aa20.74■□□□□ 0.91
GPN3-201ENST00000228827 PNPLA6Q8IY17 1366 aa20.72■□□□□ 0.91
GPN3-201ENST00000228827 TRAK1Q9UPV9 953 aa20.72■□□□□ 0.91
GPN3-201ENST00000228827 POGKQ9P215 609 aa20.71■□□□□ 0.91
GPN3-201ENST00000228827 SOS2Q07890 1332 aaPredicted RBP20.7■□□□□ 0.9
GPN3-201ENST00000228827 XPCQ01831 940 aaPredicted RBP20.69■□□□□ 0.9
GPN3-201ENST00000228827 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
GPN3-201ENST00000228827 ADGRB1O14514 1584 aa20.69■□□□□ 0.9
GPN3-201ENST00000228827 FOXO3O43524 673 aa20.69■□□□□ 0.9
GPN3-201ENST00000228827 POTEDQ86YR6 584 aa20.69■□□□□ 0.9
GPN3-201ENST00000228827 NPHP3Q7Z494 1330 aa20.68■□□□□ 0.9
GPN3-201ENST00000228827 DLC1Q96QB1 1528 aa20.66■□□□□ 0.9
GPN3-201ENST00000228827 HIRIP3Q9BW71 556 aaPredicted RBP20.65■□□□□ 0.9
GPN3-201ENST00000228827 ZNF772Q68DY9 489 aaPredicted RBP20.64■□□□□ 0.89
GPN3-201ENST00000228827 C8orf37Q96NL8 207 aa20.64■□□□□ 0.89
GPN3-201ENST00000228827 FMN2Q9NZ56 1722 aa20.64■□□□□ 0.89
GPN3-201ENST00000228827 ADAMTS2O95450 1211 aa20.63■□□□□ 0.89
GPN3-201ENST00000228827 AFF2P51816 1311 aa20.63■□□□□ 0.89
GPN3-201ENST00000228827 MINK1Q8N4C8 1332 aaPredicted RBP20.63■□□□□ 0.89
GPN3-201ENST00000228827 PXDNQ92626 1479 aa20.62■□□□□ 0.89
GPN3-201ENST00000228827 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
GPN3-201ENST00000228827 PHF8Q9UPP1 1060 aa20.61■□□□□ 0.89
GPN3-201ENST00000228827 NEUROD1Q13562 356 aa20.58■□□□□ 0.89
GPN3-201ENST00000228827 KRT28Q7Z3Y7 464 aa20.58■□□□□ 0.89
GPN3-201ENST00000228827 NBPF1Q3BBV0 1214 aa20.56■□□□□ 0.88
GPN3-201ENST00000228827 PMFBP1Q8TBY8 1022 aa20.56■□□□□ 0.88
GPN3-201ENST00000228827 NGLY1Q96IV0 654 aa20.56■□□□□ 0.88
GPN3-201ENST00000228827 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
GPN3-201ENST00000228827 KIF1AQ12756 1690 aa20.56■□□□□ 0.88
GPN3-201ENST00000228827 ADGRB2O60241 1585 aa20.55■□□□□ 0.88
GPN3-201ENST00000228827 WASLO00401 505 aaPredicted RBP20.55■□□□□ 0.88
GPN3-201ENST00000228827 RXRBP28702 533 aa20.55■□□□□ 0.88
GPN3-201ENST00000228827 ANKARQ7Z5J8 1434 aa20.54■□□□□ 0.88
GPN3-201ENST00000228827 SPATA31A3Q5VYP0 1347 aa20.54■□□□□ 0.88
GPN3-201ENST00000228827 PSME1Q06323 249 aa20.53■□□□□ 0.88
GPN3-201ENST00000228827 PRR36Q9H6K5 1346 aa20.53■□□□□ 0.88
GPN3-201ENST00000228827 COL22A1Q8NFW1 1626 aaPredicted RBP20.52■□□□□ 0.88
GPN3-201ENST00000228827 PLEKHG5O94827 1062 aa20.52■□□□□ 0.88
GPN3-201ENST00000228827 QTRT2Q9H974 415 aaKnown RBP20.52■□□□□ 0.88
GPN3-201ENST00000228827 LMOD2Q6P5Q4 547 aa20.51■□□□□ 0.87
GPN3-201ENST00000228827 USP32Q8NFA0 1604 aa20.51■□□□□ 0.87
GPN3-201ENST00000228827 EIF3AQ14152 1382 aaKnown RBP20.5■□□□□ 0.87
GPN3-201ENST00000228827 RGPD8O14715 1765 aaPredicted RBP20.5■□□□□ 0.87
GPN3-201ENST00000228827 ARHGEF28Q8N1W1 1705 aaKnown RBP20.5■□□□□ 0.87
GPN3-201ENST00000228827 TULP4Q9NRJ4 1543 aa20.5■□□□□ 0.87
GPN3-201ENST00000228827 TNS3Q68CZ2 1445 aa20.5■□□□□ 0.87
GPN3-201ENST00000228827 TRIM26Q12899 539 aaPredicted RBP20.5■□□□□ 0.87
GPN3-201ENST00000228827 USP21Q9UK80 565 aa20.5■□□□□ 0.87
GPN3-201ENST00000228827 KIAA1210Q9ULL0 1709 aa20.48■□□□□ 0.87
GPN3-201ENST00000228827 SBNO1A3KN83 1393 aa20.46■□□□□ 0.87
GPN3-201ENST00000228827 HAP1P54257 671 aaPredicted RBP20.46■□□□□ 0.87
GPN3-201ENST00000228827 CABLES1Q8TDN4 633 aa20.46■□□□□ 0.87
GPN3-201ENST00000228827 CDK19Q9BWU1 502 aa20.46■□□□□ 0.87
GPN3-201ENST00000228827 RBM6P78332 1123 aaKnown RBP20.45■□□□□ 0.86
GPN3-201ENST00000228827 FNBP4Q8N3X1 1017 aaPredicted RBP20.45■□□□□ 0.86
GPN3-201ENST00000228827 NGDNQ8NEJ9 315 aaKnown RBP20.45■□□□□ 0.86
GPN3-201ENST00000228827 NUDT16Q96DE0 195 aaKnown RBP20.45■□□□□ 0.86
GPN3-201ENST00000228827 GPRASP1Q5JY77 1395 aa20.45■□□□□ 0.86
GPN3-201ENST00000228827 CENPJQ9HC77 1338 aaPredicted RBP20.43■□□□□ 0.86
GPN3-201ENST00000228827 ATP7BP35670 1465 aa20.43■□□□□ 0.86
GPN3-201ENST00000228827 TRPC5Q9UL62 973 aaPredicted RBP20.43■□□□□ 0.86
GPN3-201ENST00000228827 ARHGEF10O15013 1369 aa20.42■□□□□ 0.86
GPN3-201ENST00000228827 RGS12O14924 1447 aa20.41■□□□□ 0.86
GPN3-201ENST00000228827 PAK3O75914 559 aaPredicted RBP20.41■□□□□ 0.86
GPN3-201ENST00000228827 CDK12Q9NYV4 1490 aaPredicted RBP20.41■□□□□ 0.86
GPN3-201ENST00000228827 BCL9LQ86UU0 1499 aa20.4■□□□□ 0.86
GPN3-201ENST00000228827 ROCK2O75116 1388 aaKnown RBP20.39■□□□□ 0.85
GPN3-201ENST00000228827 ATRNO75882 1429 aa20.39■□□□□ 0.85
GPN3-201ENST00000228827 SRPK2P78362 688 aaKnown RBP20.38■□□□□ 0.85
GPN3-201ENST00000228827 NBPF8Q3BBV2 869 aa20.38■□□□□ 0.85
GPN3-201ENST00000228827 CABP2Q9NPB3 220 aa20.37■□□□□ 0.85
GPN3-201ENST00000228827 CCDC61Q9Y6R9 512 aa20.37■□□□□ 0.85
GPN3-201ENST00000228827 TRPM1Q7Z4N2 1603 aa20.36■□□□□ 0.85
GPN3-201ENST00000228827 TRPM3Q9HCF6 1732 aaPredicted RBP20.36■□□□□ 0.85
GPN3-201ENST00000228827 UNC5CLQ8IV45 518 aa20.35■□□□□ 0.85
GPN3-201ENST00000228827 UPF1Q92900 1129 aaKnown RBP eCLIP20.35■□□□□ 0.85
GPN3-201ENST00000228827 ACEP12821 1306 aa20.35■□□□□ 0.85
GPN3-201ENST00000228827 SLIT2O94813 1529 aa20.34■□□□□ 0.85
GPN3-201ENST00000228827 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
GPN3-201ENST00000228827 MARF1Q9Y4F3 1742 aaKnown RBP20.34■□□□□ 0.85
GPN3-201ENST00000228827 ITSN1Q15811 1721 aa20.32■□□□□ 0.84
GPN3-201ENST00000228827 PLEKHG3A1L390 1219 aa20.32■□□□□ 0.84
GPN3-201ENST00000228827 GJD4Q96KN9 370 aaPredicted RBP20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms