RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 TMEM132EQ6IEE7 984 aa26.49■■□□□ 1.83
PFN1-201ENST00000225655 ORAI2Q96SN7 254 aa26.49■■□□□ 1.83
PFN1-201ENST00000225655 STK26Q9P289 416 aa26.49■■□□□ 1.83
PFN1-201ENST00000225655 PNPLA6Q8IY17 1366 aa26.48■■□□□ 1.83
PFN1-201ENST00000225655 NUTM2BA6NNL0 878 aaPredicted RBP26.48■■□□□ 1.83
PFN1-201ENST00000225655 NUTM2EB1AL46 878 aaPredicted RBP26.48■■□□□ 1.83
PFN1-201ENST00000225655 NUTM2AQ8IVF1 878 aaPredicted RBP26.48■■□□□ 1.83
PFN1-201ENST00000225655 C14orf93Q9H972 538 aaKnown RBP26.47■■□□□ 1.83
PFN1-201ENST00000225655 YTHDC2Q9H6S0 1430 aaKnown RBP26.47■■□□□ 1.83
PFN1-201ENST00000225655 SOS2Q07890 1332 aaPredicted RBP26.46■■□□□ 1.83
PFN1-201ENST00000225655 WAPLQ7Z5K2 1190 aa26.46■■□□□ 1.83
PFN1-201ENST00000225655 HRCP23327 699 aa26.44■■□□□ 1.82
PFN1-201ENST00000225655 PLEKHH1Q9ULM0 1364 aa26.43■■□□□ 1.82
PFN1-201ENST00000225655 SIRT1Q96EB6 747 aa26.42■■□□□ 1.82
PFN1-201ENST00000225655 ESCO1Q5FWF5 840 aa26.4■■□□□ 1.82
PFN1-201ENST00000225655 DHX57Q6P158 1386 aaKnown RBP26.39■■□□□ 1.82
PFN1-201ENST00000225655 CFAP70Q5T0N1 1121 aa26.39■■□□□ 1.82
PFN1-201ENST00000225655 FMN2Q9NZ56 1722 aa26.38■■□□□ 1.81
PFN1-201ENST00000225655 AFF2P51816 1311 aa26.38■■□□□ 1.81
PFN1-201ENST00000225655 NPHP3Q7Z494 1330 aa26.38■■□□□ 1.81
PFN1-201ENST00000225655 PXDNQ92626 1479 aa26.36■■□□□ 1.81
PFN1-201ENST00000225655 COL22A1Q8NFW1 1626 aaPredicted RBP26.36■■□□□ 1.81
PFN1-201ENST00000225655 RXRBP28702 533 aa26.33■■□□□ 1.81
PFN1-201ENST00000225655 C8orf37Q96NL8 207 aa26.33■■□□□ 1.81
PFN1-201ENST00000225655 KIF1AQ12756 1690 aa26.32■■□□□ 1.8
PFN1-201ENST00000225655 NUTM2FA1L443 756 aa26.32■■□□□ 1.8
PFN1-201ENST00000225655 FOXO3O43524 673 aa26.32■■□□□ 1.8
PFN1-201ENST00000225655 DLC1Q96QB1 1528 aa26.32■■□□□ 1.8
PFN1-201ENST00000225655 ADGRB1O14514 1584 aa26.31■■□□□ 1.8
PFN1-201ENST00000225655 CDK12Q9NYV4 1490 aaPredicted RBP26.3■■□□□ 1.8
PFN1-201ENST00000225655 STAC3Q96MF2 364 aa26.3■■□□□ 1.8
PFN1-201ENST00000225655 ADAMTS2O95450 1211 aa26.29■■□□□ 1.8
PFN1-201ENST00000225655 DCAF11Q8TEB1 546 aa26.28■■□□□ 1.8
PFN1-201ENST00000225655 PRAM1Q96QH2 718 aa26.28■■□□□ 1.8
PFN1-201ENST00000225655 NGLY1Q96IV0 654 aa26.27■■□□□ 1.8
PFN1-201ENST00000225655 RGPD8O14715 1765 aaPredicted RBP26.26■■□□□ 1.79
PFN1-201ENST00000225655 XPCQ01831 940 aaPredicted RBP26.26■■□□□ 1.79
PFN1-201ENST00000225655 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
PFN1-201ENST00000225655 KDM2AQ9Y2K7 1162 aa26.25■■□□□ 1.79
PFN1-201ENST00000225655 QTRT2Q9H974 415 aaKnown RBP26.24■■□□□ 1.79
PFN1-201ENST00000225655 ADGRB2O60241 1585 aa26.24■■□□□ 1.79
PFN1-201ENST00000225655 POGKQ9P215 609 aa26.23■■□□□ 1.79
PFN1-201ENST00000225655 SAFB2Q14151 953 aaKnown RBP eCLIP26.22■■□□□ 1.79
PFN1-201ENST00000225655 MARF1Q9Y4F3 1742 aaKnown RBP26.22■■□□□ 1.79
PFN1-201ENST00000225655 RBM6P78332 1123 aaKnown RBP26.21■■□□□ 1.79
PFN1-201ENST00000225655 FNBP4Q8N3X1 1017 aaPredicted RBP26.2■■□□□ 1.78
PFN1-201ENST00000225655 PHF8Q9UPP1 1060 aa26.2■■□□□ 1.78
PFN1-201ENST00000225655 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
PFN1-201ENST00000225655 TRAK1Q9UPV9 953 aa26.19■■□□□ 1.78
PFN1-201ENST00000225655 ANKARQ7Z5J8 1434 aa26.19■■□□□ 1.78
PFN1-201ENST00000225655 USP21Q9UK80 565 aa26.18■■□□□ 1.78
PFN1-201ENST00000225655 USP32Q8NFA0 1604 aa26.17■■□□□ 1.78
PFN1-201ENST00000225655 KRT28Q7Z3Y7 464 aa26.17■■□□□ 1.78
PFN1-201ENST00000225655 RGS12O14924 1447 aa26.16■■□□□ 1.78
PFN1-201ENST00000225655 PSME1Q06323 249 aa26.14■■□□□ 1.78
PFN1-201ENST00000225655 UPF1Q92900 1129 aaKnown RBP eCLIP26.14■■□□□ 1.78
PFN1-201ENST00000225655 TRPC5Q9UL62 973 aaPredicted RBP26.14■■□□□ 1.78
PFN1-201ENST00000225655 TNS3Q68CZ2 1445 aa26.13■■□□□ 1.77
PFN1-201ENST00000225655 EIF3AQ14152 1382 aaKnown RBP26.12■■□□□ 1.77
PFN1-201ENST00000225655 ARHGEF28Q8N1W1 1705 aaKnown RBP26.12■■□□□ 1.77
PFN1-201ENST00000225655 ATRNO75882 1429 aa26.12■■□□□ 1.77
PFN1-201ENST00000225655 BCL9LQ86UU0 1499 aa26.11■■□□□ 1.77
PFN1-201ENST00000225655 SBNO1A3KN83 1393 aa26.11■■□□□ 1.77
PFN1-201ENST00000225655 HIRIP3Q9BW71 556 aaPredicted RBP26.11■■□□□ 1.77
PFN1-201ENST00000225655 MINK1Q8N4C8 1332 aaPredicted RBP26.11■■□□□ 1.77
PFN1-201ENST00000225655 KIAA1210Q9ULL0 1709 aa26.1■■□□□ 1.77
PFN1-201ENST00000225655 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
PFN1-201ENST00000225655 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.08■■□□□ 1.76
PFN1-201ENST00000225655 WASLO00401 505 aaPredicted RBP26.07■■□□□ 1.76
PFN1-201ENST00000225655 ARHGEF10O15013 1369 aa26.07■■□□□ 1.76
PFN1-201ENST00000225655 PMFBP1Q8TBY8 1022 aa26.06■■□□□ 1.76
PFN1-201ENST00000225655 PRR36Q9H6K5 1346 aa26.05■■□□□ 1.76
PFN1-201ENST00000225655 ABCA3Q99758 1704 aa26.05■■□□□ 1.76
PFN1-201ENST00000225655 SLIT2O94813 1529 aa26.04■■□□□ 1.76
PFN1-201ENST00000225655 TRPM3Q9HCF6 1732 aaPredicted RBP26.04■■□□□ 1.76
PFN1-201ENST00000225655 ITSN1Q15811 1721 aa26.01■■□□□ 1.75
PFN1-201ENST00000225655 GPRASP1Q5JY77 1395 aa26.01■■□□□ 1.75
PFN1-201ENST00000225655 HAP1P54257 671 aaPredicted RBP26■■□□□ 1.75
PFN1-201ENST00000225655 LMOD2Q6P5Q4 547 aa26■■□□□ 1.75
PFN1-201ENST00000225655 UNC5CLQ8IV45 518 aa26■■□□□ 1.75
PFN1-201ENST00000225655 CABLES1Q8TDN4 633 aa26■■□□□ 1.75
PFN1-201ENST00000225655 ALS2Q96Q42 1657 aa25.99■■□□□ 1.75
PFN1-201ENST00000225655 GJD4Q96KN9 370 aaPredicted RBP25.99■■□□□ 1.75
PFN1-201ENST00000225655 ATAD2Q6PL18 1390 aa25.98■■□□□ 1.75
PFN1-201ENST00000225655 ATP7BP35670 1465 aa25.98■■□□□ 1.75
PFN1-201ENST00000225655 NWD2Q9ULI1 1742 aa25.97■■□□□ 1.75
PFN1-201ENST00000225655 PLCH1Q4KWH8 1693 aa25.96■■□□□ 1.75
PFN1-201ENST00000225655 NBPF1Q3BBV0 1214 aa25.95■■□□□ 1.74
PFN1-201ENST00000225655 RALGAPBQ86X10 1494 aa25.94■■□□□ 1.74
PFN1-201ENST00000225655 NGDNQ8NEJ9 315 aaKnown RBP25.94■■□□□ 1.74
PFN1-201ENST00000225655 NUDT16Q96DE0 195 aaKnown RBP25.94■■□□□ 1.74
PFN1-201ENST00000225655 GLI3P10071 1580 aa25.94■■□□□ 1.74
PFN1-201ENST00000225655 PLEKHG5O94827 1062 aa25.93■■□□□ 1.74
PFN1-201ENST00000225655 CDK19Q9BWU1 502 aa25.92■■□□□ 1.74
PFN1-201ENST00000225655 TOPAZ1Q8N9V7 1692 aa25.92■■□□□ 1.74
PFN1-201ENST00000225655 CRYBG1Q9Y4K1 1723 aa25.89■■□□□ 1.74
PFN1-201ENST00000225655 FAM83GA6ND36 823 aa25.89■■□□□ 1.74
PFN1-201ENST00000225655 VPS72Q15906 364 aa25.89■■□□□ 1.74
PFN1-201ENST00000225655 L3MBTL2Q969R5 705 aa25.89■■□□□ 1.74
PFN1-201ENST00000225655 POLR3AO14802 1390 aaPredicted RBP25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms