RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 CABP2Q9NPB3 220 aa17.34■□□□□ 0.37
PLOD3-201ENST00000223127 QRICH2Q9H0J4 1663 aa17.34■□□□□ 0.37
PLOD3-201ENST00000223127 MYO3AQ8NEV4 1616 aa17.34■□□□□ 0.37
PLOD3-201ENST00000223127 PRAM1Q96QH2 718 aa17.34■□□□□ 0.37
PLOD3-201ENST00000223127 POGKQ9P215 609 aa17.34■□□□□ 0.37
PLOD3-201ENST00000223127 PPP2R1AP30153 589 aa17.33■□□□□ 0.36
PLOD3-201ENST00000223127 RIMS2Q9UQ26 1411 aa17.32■□□□□ 0.36
PLOD3-201ENST00000223127 LRPPRCP42704 1394 aaKnown RBP17.32■□□□□ 0.36
PLOD3-201ENST00000223127 MINK1Q8N4C8 1332 aaPredicted RBP17.32■□□□□ 0.36
PLOD3-201ENST00000223127 ASXL1Q8IXJ9 1541 aa17.32■□□□□ 0.36
PLOD3-201ENST00000223127 EVC2Q86UK5 1308 aa17.32■□□□□ 0.36
PLOD3-201ENST00000223127 SRPK2P78362 688 aaKnown RBP17.31■□□□□ 0.36
PLOD3-201ENST00000223127 TNRQ92752 1358 aa17.3■□□□□ 0.36
PLOD3-201ENST00000223127 YTHDC2Q9H6S0 1430 aaKnown RBP17.3■□□□□ 0.36
PLOD3-201ENST00000223127 ARHGEF28Q8N1W1 1705 aaKnown RBP17.29■□□□□ 0.36
PLOD3-201ENST00000223127 ALKQ9UM73 1620 aa17.28■□□□□ 0.36
PLOD3-201ENST00000223127 TNNT2P45379 298 aaPredicted RBP17.28■□□□□ 0.36
PLOD3-201ENST00000223127 WAPLQ7Z5K2 1190 aa17.27■□□□□ 0.35
PLOD3-201ENST00000223127 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
PLOD3-201ENST00000223127 TULP4Q9NRJ4 1543 aa17.26■□□□□ 0.35
PLOD3-201ENST00000223127 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
PLOD3-201ENST00000223127 ADAMTS8Q9UP79 889 aa17.25■□□□□ 0.35
PLOD3-201ENST00000223127 PTPRMP28827 1452 aa17.25■□□□□ 0.35
PLOD3-201ENST00000223127 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
PLOD3-201ENST00000223127 IL27Q8NEV9 243 aa17.24■□□□□ 0.35
PLOD3-201ENST00000223127 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
PLOD3-201ENST00000223127 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
PLOD3-201ENST00000223127 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
PLOD3-201ENST00000223127 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
PLOD3-201ENST00000223127 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
PLOD3-201ENST00000223127 METP08581 1390 aa17.21■□□□□ 0.35
PLOD3-201ENST00000223127 PLEKHH1Q9ULM0 1364 aa17.21■□□□□ 0.35
PLOD3-201ENST00000223127 HDGFP51858 240 aaKnown RBP17.21■□□□□ 0.35
PLOD3-201ENST00000223127 TXNDC2Q86VQ3 553 aa17.21■□□□□ 0.35
PLOD3-201ENST00000223127 CDK19Q9BWU1 502 aa17.2■□□□□ 0.34
PLOD3-201ENST00000223127 TMEM2Q9UHN6 1383 aa17.19■□□□□ 0.34
PLOD3-201ENST00000223127 EXOC6Q8TAG9 804 aa17.19■□□□□ 0.34
PLOD3-201ENST00000223127 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
PLOD3-201ENST00000223127 TCERG1O14776 1098 aaKnown RBP17.18■□□□□ 0.34
PLOD3-201ENST00000223127 LTKP29376 864 aa17.18■□□□□ 0.34
PLOD3-201ENST00000223127 LAS1LQ9Y4W2 734 aaKnown RBP17.18■□□□□ 0.34
PLOD3-201ENST00000223127 PUS7Q96PZ0 661 aaKnown RBP17.18■□□□□ 0.34
PLOD3-201ENST00000223127 ANKRD36BQ8N2N9 1353 aa17.17■□□□□ 0.34
PLOD3-201ENST00000223127 CCDC146Q8IYE0 955 aa17.17■□□□□ 0.34
PLOD3-201ENST00000223127 CDCA7LQ96GN5 454 aa17.17■□□□□ 0.34
PLOD3-201ENST00000223127 A0A1W2PP64 1363 aa17.16■□□□□ 0.34
PLOD3-201ENST00000223127 NEFMP07197 916 aa17.16■□□□□ 0.34
PLOD3-201ENST00000223127 PDE4AP27815 886 aa17.16■□□□□ 0.34
PLOD3-201ENST00000223127 SLC26A8Q96RN1 970 aa17.16■□□□□ 0.34
PLOD3-201ENST00000223127 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
PLOD3-201ENST00000223127 BLMP54132 1417 aaPredicted RBP17.15■□□□□ 0.34
PLOD3-201ENST00000223127 BACH2Q9BYV9 841 aa17.14■□□□□ 0.33
PLOD3-201ENST00000223127 ATAD2Q6PL18 1390 aa17.14■□□□□ 0.33
PLOD3-201ENST00000223127 ABCC11Q96J66 1382 aa17.14■□□□□ 0.33
PLOD3-201ENST00000223127 NRXN3Q9Y4C0 1643 aa17.14■□□□□ 0.33
PLOD3-201ENST00000223127 GGNBP2Q9H3C7 697 aa17.14■□□□□ 0.33
PLOD3-201ENST00000223127 UBR1Q8IWV7 1749 aa17.13■□□□□ 0.33
PLOD3-201ENST00000223127 RTN4Q9NQC3 1192 aaKnown RBP17.13■□□□□ 0.33
PLOD3-201ENST00000223127 TERF2IPQ9NYB0 399 aa17.13■□□□□ 0.33
PLOD3-201ENST00000223127 USP35Q9P2H5 1018 aa17.13■□□□□ 0.33
PLOD3-201ENST00000223127 RCAN3Q9UKA8 241 aa17.12■□□□□ 0.33
PLOD3-201ENST00000223127 EID1Q9Y6B2 187 aa17.12■□□□□ 0.33
PLOD3-201ENST00000223127 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
PLOD3-201ENST00000223127 MTHFSP49914 203 aa17.11■□□□□ 0.33
PLOD3-201ENST00000223127 SETD1AO15047 1707 aaKnown RBP17.11■□□□□ 0.33
PLOD3-201ENST00000223127 C3P01024 1663 aa17.11■□□□□ 0.33
PLOD3-201ENST00000223127 MS4A1P11836 297 aa17.11■□□□□ 0.33
PLOD3-201ENST00000223127 FER1L4A9Z1Z3 1794 aa17.1■□□□□ 0.33
PLOD3-201ENST00000223127 HDGFL2Q7Z4V5 671 aaPredicted RBP17.1■□□□□ 0.33
PLOD3-201ENST00000223127 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
PLOD3-201ENST00000223127 DNAJC5Q9H3Z4 198 aa17.1■□□□□ 0.33
PLOD3-201ENST00000223127 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.09■□□□□ 0.33
PLOD3-201ENST00000223127 NINLQ9Y2I6 1382 aa17.09■□□□□ 0.33
PLOD3-201ENST00000223127 WASLO00401 505 aaPredicted RBP17.09■□□□□ 0.33
PLOD3-201ENST00000223127 DLC1Q96QB1 1528 aa17.08■□□□□ 0.33
PLOD3-201ENST00000223127 APAF1O14727 1248 aa17.08■□□□□ 0.33
PLOD3-201ENST00000223127 ADAMTS13Q76LX8 1427 aa17.08■□□□□ 0.32
PLOD3-201ENST00000223127 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
PLOD3-201ENST00000223127 PDE3BQ13370 1112 aa17.07■□□□□ 0.32
PLOD3-201ENST00000223127 FYB1O15117 783 aa17.07■□□□□ 0.32
PLOD3-201ENST00000223127 THEMISQ8N1K5 641 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-201ENST00000223127 INSRP06213 1382 aa17.07■□□□□ 0.32
PLOD3-201ENST00000223127 PPM1GO15355 546 aaPredicted RBP17.07■□□□□ 0.32
PLOD3-201ENST00000223127 ROBO2Q9HCK4 1378 aa17.07■□□□□ 0.32
PLOD3-201ENST00000223127 CD163L1Q9NR16 1453 aa17.06■□□□□ 0.32
PLOD3-201ENST00000223127 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
PLOD3-201ENST00000223127 POLR3AO14802 1390 aaPredicted RBP17.06■□□□□ 0.32
PLOD3-201ENST00000223127 NSD2O96028 1365 aa17.04■□□□□ 0.32
PLOD3-201ENST00000223127 NUDT16Q96DE0 195 aaKnown RBP17.04■□□□□ 0.32
PLOD3-201ENST00000223127 CFAP53Q96M91 514 aa17.04■□□□□ 0.32
PLOD3-201ENST00000223127 FBLN1P23142 703 aa17.03■□□□□ 0.32
PLOD3-201ENST00000223127 NEUROD2Q15784 382 aa17.03■□□□□ 0.32
PLOD3-201ENST00000223127 SKAP1Q86WV1 359 aa17.03■□□□□ 0.32
PLOD3-201ENST00000223127 USP32Q8NFA0 1604 aa17.03■□□□□ 0.32
PLOD3-201ENST00000223127 AMOTL2Q9Y2J4 779 aa17.02■□□□□ 0.32
PLOD3-201ENST00000223127 FAM135BQ49AJ0 1406 aa17.02■□□□□ 0.31
PLOD3-201ENST00000223127 PPIP5K1Q6PFW1 1433 aa17.02■□□□□ 0.31
PLOD3-201ENST00000223127 TECPR2O15040 1411 aa17.01■□□□□ 0.31
PLOD3-201ENST00000223127 RRP7AQ9Y3A4 280 aaKnown RBP17■□□□□ 0.31
PLOD3-201ENST00000223127 CCDC61Q9Y6R9 512 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms