RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 DMRT2Q9Y5R5 561 aa17.1■□□□□ 0.33
RAB3D-201ENST00000222120 CALD1Q05682 793 aaKnown RBP17.1■□□□□ 0.33
RAB3D-201ENST00000222120 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
RAB3D-201ENST00000222120 IGHDP01880 384 aa17.09■□□□□ 0.33
RAB3D-201ENST00000222120 TRHP20396 242 aaPredicted RBP17.09■□□□□ 0.33
RAB3D-201ENST00000222120 COL17A1Q9UMD9 1497 aaPredicted RBP17.09■□□□□ 0.33
RAB3D-201ENST00000222120 C1orf115Q9H7X2 142 aa17.09■□□□□ 0.33
RAB3D-201ENST00000222120 USP35Q9P2H5 1018 aa17.09■□□□□ 0.33
RAB3D-201ENST00000222120 TNNQ9UQP3 1299 aa17.09■□□□□ 0.33
RAB3D-201ENST00000222120 RARSP54136 660 aaKnown RBP17.09■□□□□ 0.33
RAB3D-201ENST00000222120 C14orf93Q9H972 538 aaKnown RBP17.09■□□□□ 0.33
RAB3D-201ENST00000222120 FRAT2O75474 233 aaPredicted RBP17.08■□□□□ 0.33
RAB3D-201ENST00000222120 ANP32BQ92688 251 aaKnown RBP17.08■□□□□ 0.33
RAB3D-201ENST00000222120 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.33
RAB3D-201ENST00000222120 RNF123Q5XPI4 1314 aa17.08■□□□□ 0.33
RAB3D-201ENST00000222120 ABCA8O94911 1581 aa17.08■□□□□ 0.32
RAB3D-201ENST00000222120 GSE1Q14687 1217 aa17.08■□□□□ 0.32
RAB3D-201ENST00000222120 SLC52A1Q9NWF4 448 aa17.08■□□□□ 0.32
RAB3D-201ENST00000222120 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
RAB3D-201ENST00000222120 KDM5CP41229 1560 aa17.06■□□□□ 0.32
RAB3D-201ENST00000222120 TMPOP42166 694 aaKnown RBP17.06■□□□□ 0.32
RAB3D-201ENST00000222120 AMPHP49418 695 aa17.06■□□□□ 0.32
RAB3D-201ENST00000222120 WDR63Q8IWG1 891 aa17.06■□□□□ 0.32
RAB3D-201ENST00000222120 ASXL2Q76L83 1435 aa17.05■□□□□ 0.32
RAB3D-201ENST00000222120 RRS1Q15050 365 aaKnown RBP17.05■□□□□ 0.32
RAB3D-201ENST00000222120 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
RAB3D-201ENST00000222120 BCORL1Q5H9F3 1711 aa17.05■□□□□ 0.32
RAB3D-201ENST00000222120 PLA2R1Q13018 1463 aa17.05■□□□□ 0.32
RAB3D-201ENST00000222120 CASC1Q6TDU7 716 aa17.04■□□□□ 0.32
RAB3D-201ENST00000222120 IL27Q8NEV9 243 aa17.04■□□□□ 0.32
RAB3D-201ENST00000222120 ABCC2Q92887 1545 aa17.04■□□□□ 0.32
RAB3D-201ENST00000222120 NKTRP30414 1462 aaKnown RBP17.04■□□□□ 0.32
RAB3D-201ENST00000222120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.04■□□□□ 0.32
RAB3D-201ENST00000222120 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
RAB3D-201ENST00000222120 SAMD9LQ8IVG5 1584 aa17.04■□□□□ 0.32
RAB3D-201ENST00000222120 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
RAB3D-201ENST00000222120 GPRASP1Q5JY77 1395 aa17.03■□□□□ 0.32
RAB3D-201ENST00000222120 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
RAB3D-201ENST00000222120 CFAP65Q6ZU64 1925 aaKnown RBP17.03■□□□□ 0.32
RAB3D-201ENST00000222120 GLIPR1L2Q4G1C9 344 aa17.02■□□□□ 0.32
RAB3D-201ENST00000222120 SSH1Q8WYL5 1049 aa17.02■□□□□ 0.32
RAB3D-201ENST00000222120 ASXL1Q8IXJ9 1541 aa17.02■□□□□ 0.31
RAB3D-201ENST00000222120 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
RAB3D-201ENST00000222120 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
RAB3D-201ENST00000222120 ATF7IPQ6VMQ6 1270 aa17■□□□□ 0.31
RAB3D-201ENST00000222120 C22orf23Q9BZE7 217 aa17■□□□□ 0.31
RAB3D-201ENST00000222120 EID1Q9Y6B2 187 aa17■□□□□ 0.31
RAB3D-201ENST00000222120 KIF16BQ96L93 1317 aa17■□□□□ 0.31
RAB3D-201ENST00000222120 DCTN1Q14203 1278 aa16.99■□□□□ 0.31
RAB3D-201ENST00000222120 WDR7Q9Y4E6 1490 aa16.99■□□□□ 0.31
RAB3D-201ENST00000222120 TMEM57Q8N5G2 664 aa16.99■□□□□ 0.31
RAB3D-201ENST00000222120 PCDHB15Q9Y5E8 787 aa16.99■□□□□ 0.31
RAB3D-201ENST00000222120 RLBP1P12271 317 aa16.99■□□□□ 0.31
RAB3D-201ENST00000222120 OS9Q13438 667 aaPredicted RBP16.99■□□□□ 0.31
RAB3D-201ENST00000222120 ERCC6L2Q5T890 1561 aa16.99■□□□□ 0.31
RAB3D-201ENST00000222120 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
RAB3D-201ENST00000222120 SLC26A8Q96RN1 970 aa16.99■□□□□ 0.31
RAB3D-201ENST00000222120 MAGI2Q86UL8 1455 aa16.98■□□□□ 0.31
RAB3D-201ENST00000222120 EMILIN1Q9Y6C2 1016 aa16.98■□□□□ 0.31
RAB3D-201ENST00000222120 TTC37Q6PGP7 1564 aa16.98■□□□□ 0.31
RAB3D-201ENST00000222120 GNAI1P63096 354 aa16.98■□□□□ 0.31
RAB3D-201ENST00000222120 NOL8Q76FK4 1167 aaKnown RBP16.98■□□□□ 0.31
RAB3D-201ENST00000222120 STK31Q9BXU1 1019 aa16.98■□□□□ 0.31
RAB3D-201ENST00000222120 HAP1P54257 671 aaPredicted RBP16.97■□□□□ 0.31
RAB3D-201ENST00000222120 NME9Q86XW9 330 aa16.97■□□□□ 0.31
RAB3D-201ENST00000222120 CDC42BPAQ5VT25 1732 aa16.97■□□□□ 0.31
RAB3D-201ENST00000222120 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
RAB3D-201ENST00000222120 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.3
RAB3D-201ENST00000222120 BRPF3Q9ULD4 1205 aa16.96■□□□□ 0.3
RAB3D-201ENST00000222120 TWISTNBQ3B726 338 aaPredicted RBP16.95■□□□□ 0.3
RAB3D-201ENST00000222120 FYB1O15117 783 aa16.95■□□□□ 0.3
RAB3D-201ENST00000222120 PRKCSHP14314 528 aaPredicted RBP16.95■□□□□ 0.3
RAB3D-201ENST00000222120 TRIM27P14373 513 aa16.94■□□□□ 0.3
RAB3D-201ENST00000222120 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
RAB3D-201ENST00000222120 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
RAB3D-201ENST00000222120 TRIM6-TRIM34B2RNG4 842 aa16.94■□□□□ 0.3
RAB3D-201ENST00000222120 RTEL1-TNFRSF6BF6WH68 1400 aa16.93■□□□□ 0.3
RAB3D-201ENST00000222120 ATAD2Q6PL18 1390 aa16.93■□□□□ 0.3
RAB3D-201ENST00000222120 MAST1Q9Y2H9 1570 aa16.93■□□□□ 0.3
RAB3D-201ENST00000222120 C8orf34Q49A92 452 aa16.93■□□□□ 0.3
RAB3D-201ENST00000222120 NAP1L5Q96NT1 182 aaPredicted RBP16.93■□□□□ 0.3
RAB3D-201ENST00000222120 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
RAB3D-201ENST00000222120 A0A0G2JS52 829 aa16.91■□□□□ 0.3
RAB3D-201ENST00000222120 NUDT16Q96DE0 195 aaKnown RBP16.91■□□□□ 0.3
RAB3D-201ENST00000222120 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
RAB3D-201ENST00000222120 UGGT1Q9NYU2 1555 aa16.91■□□□□ 0.3
RAB3D-201ENST00000222120 EIF2AK4Q9P2K8 1649 aaKnown RBP16.91■□□□□ 0.3
RAB3D-201ENST00000222120 MIS18AQ9NYP9 233 aa16.91■□□□□ 0.3
RAB3D-201ENST00000222120 FCHSD2O94868 740 aa16.9■□□□□ 0.3
RAB3D-201ENST00000222120 SEC24BO95487 1268 aa16.9■□□□□ 0.3
RAB3D-201ENST00000222120 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.9■□□□□ 0.3
RAB3D-201ENST00000222120 PIK3C2GO75747 1445 aa16.9■□□□□ 0.3
RAB3D-201ENST00000222120 ATP10AO60312 1499 aa16.9■□□□□ 0.3
RAB3D-201ENST00000222120 EIF2S2P20042 333 aaKnown RBP16.9■□□□□ 0.3
RAB3D-201ENST00000222120 L1TD1Q5T7N2 865 aaKnown RBP16.9■□□□□ 0.3
RAB3D-201ENST00000222120 KDM5DQ9BY66 1539 aa16.89■□□□□ 0.29
RAB3D-201ENST00000222120 AAMPQ13685 434 aa16.89■□□□□ 0.29
RAB3D-201ENST00000222120 TSPYL4Q9UJ04 414 aa16.89■□□□□ 0.29
RAB3D-201ENST00000222120 FAM83GA6ND36 823 aa16.89■□□□□ 0.29
RAB3D-201ENST00000222120 GOLGA6L3A6NEY3 463 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms