RNA–Protein interactions for RNA: ENST00000221996.11

CRX-201, Transcript of cone-rod homeobox, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CRX, Length 4,470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-201ENST00000221996 COL17A1Q9UMD9 1497 aaPredicted RBP12.32□□□□□ -0.44
CRX-201ENST00000221996 PRKAR2BP31323 418 aa12.31□□□□□ -0.44
CRX-201ENST00000221996 WDR63Q8IWG1 891 aa12.31□□□□□ -0.44
CRX-201ENST00000221996 SAMD9LQ8IVG5 1584 aa12.31□□□□□ -0.44
CRX-201ENST00000221996 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
CRX-201ENST00000221996 SLC4A10Q6U841 1118 aa12.3□□□□□ -0.44
CRX-201ENST00000221996 LRPPRCP42704 1394 aaKnown RBP12.3□□□□□ -0.44
CRX-201ENST00000221996 GOLGA6L22H0YM25 854 aa12.3□□□□□ -0.44
CRX-201ENST00000221996 EIF5BO60841 1220 aaKnown RBP12.3□□□□□ -0.44
CRX-201ENST00000221996 GPRASP1Q5JY77 1395 aa12.3□□□□□ -0.44
CRX-201ENST00000221996 EIF2AK4Q9P2K8 1649 aaKnown RBP12.3□□□□□ -0.44
CRX-201ENST00000221996 ANKRD45Q5TZF3 282 aa12.29□□□□□ -0.44
CRX-201ENST00000221996 ATAD2Q6PL18 1390 aa12.29□□□□□ -0.44
CRX-201ENST00000221996 WAPLQ7Z5K2 1190 aa12.29□□□□□ -0.44
CRX-201ENST00000221996 STK31Q9BXU1 1019 aa12.29□□□□□ -0.44
CRX-201ENST00000221996 KIF16BQ96L93 1317 aa12.29□□□□□ -0.44
CRX-201ENST00000221996 ZNF518AQ6AHZ1 1483 aa12.28□□□□□ -0.44
CRX-201ENST00000221996 MAST1Q9Y2H9 1570 aa12.28□□□□□ -0.44
CRX-201ENST00000221996 ASXL1Q8IXJ9 1541 aa12.28□□□□□ -0.44
CRX-201ENST00000221996 CARD14Q9BXL6 1004 aa12.27□□□□□ -0.44
CRX-201ENST00000221996 GNAI1P63096 354 aa12.27□□□□□ -0.45
CRX-201ENST00000221996 NCLP19338 710 aaKnown RBP12.27□□□□□ -0.45
CRX-201ENST00000221996 AAMPQ13685 434 aa12.27□□□□□ -0.45
CRX-201ENST00000221996 TTC37Q6PGP7 1564 aa12.26□□□□□ -0.45
CRX-201ENST00000221996 OS9Q13438 667 aaPredicted RBP12.26□□□□□ -0.45
CRX-201ENST00000221996 USP35Q9P2H5 1018 aa12.26□□□□□ -0.45
CRX-201ENST00000221996 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
CRX-201ENST00000221996 KDM5CP41229 1560 aa12.26□□□□□ -0.45
CRX-201ENST00000221996 TMPOP42166 694 aaKnown RBP12.25□□□□□ -0.45
CRX-201ENST00000221996 LNPKQ9C0E8 428 aa12.25□□□□□ -0.45
CRX-201ENST00000221996 PDZRN3Q9UPQ7 1066 aa12.25□□□□□ -0.45
CRX-201ENST00000221996 CDC42BPAQ5VT25 1732 aa12.25□□□□□ -0.45
CRX-201ENST00000221996 PLEKHH1Q9ULM0 1364 aa12.25□□□□□ -0.45
CRX-201ENST00000221996 RARSP54136 660 aaKnown RBP12.24□□□□□ -0.45
CRX-201ENST00000221996 ATP7AQ04656 1500 aa12.24□□□□□ -0.45
CRX-201ENST00000221996 NOB1Q9ULX3 412 aaKnown RBP12.24□□□□□ -0.45
CRX-201ENST00000221996 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
CRX-201ENST00000221996 MYO5CQ9NQX4 1742 aa12.23□□□□□ -0.45
CRX-201ENST00000221996 PLA2R1Q13018 1463 aa12.23□□□□□ -0.45
CRX-201ENST00000221996 PREX2Q70Z35 1606 aa12.23□□□□□ -0.45
CRX-201ENST00000221996 HMMRO75330 724 aa12.23□□□□□ -0.45
CRX-201ENST00000221996 SLC26A8Q96RN1 970 aa12.23□□□□□ -0.45
CRX-201ENST00000221996 ERCC6L2Q5T890 1561 aa12.22□□□□□ -0.45
CRX-201ENST00000221996 GZF1Q9H116 711 aaPredicted RBP12.22□□□□□ -0.45
CRX-201ENST00000221996 ADCY10Q96PN6 1610 aa12.22□□□□□ -0.45
CRX-201ENST00000221996 RRS1Q15050 365 aaKnown RBP12.22□□□□□ -0.45
CRX-201ENST00000221996 CFAP44Q96MT7 982 aa12.22□□□□□ -0.45
CRX-201ENST00000221996 NINLQ9Y2I6 1382 aa12.22□□□□□ -0.45
CRX-201ENST00000221996 MVPQ14764 893 aaKnown RBP12.22□□□□□ -0.45
CRX-201ENST00000221996 ATF7IPQ6VMQ6 1270 aa12.22□□□□□ -0.45
CRX-201ENST00000221996 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.45
CRX-201ENST00000221996 CHD1O14646 1710 aa12.21□□□□□ -0.45
CRX-201ENST00000221996 NUDT16Q96DE0 195 aaKnown RBP12.21□□□□□ -0.46
CRX-201ENST00000221996 FOXD4L1Q9NU39 408 aa12.21□□□□□ -0.46
CRX-201ENST00000221996 A0A0G2JS52 829 aa12.21□□□□□ -0.46
CRX-201ENST00000221996 FCHSD2O94868 740 aa12.21□□□□□ -0.46
CRX-201ENST00000221996 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.46
CRX-201ENST00000221996 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.46
CRX-201ENST00000221996 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
CRX-201ENST00000221996 THUMPD2Q9BTF0 503 aaKnown RBP12.2□□□□□ -0.46
CRX-201ENST00000221996 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
CRX-201ENST00000221996 NECTIN2Q92692 538 aa12.2□□□□□ -0.46
CRX-201ENST00000221996 SULT6B1Q6IMI4 303 aa12.2□□□□□ -0.46
CRX-201ENST00000221996 TWISTNBQ3B726 338 aaPredicted RBP12.19□□□□□ -0.46
CRX-201ENST00000221996 KDM5DQ9BY66 1539 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 SPINK5Q9NQ38 1064 aaPredicted RBP12.19□□□□□ -0.46
CRX-201ENST00000221996 ATP10AO60312 1499 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 NLRP6P59044 892 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 TPRNQ4KMQ1 711 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 SSH1Q8WYL5 1049 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 TRIM44Q96DX7 344 aaPredicted RBP12.19□□□□□ -0.46
CRX-201ENST00000221996 ZNF692Q9BU19 519 aaPredicted RBP12.19□□□□□ -0.46
CRX-201ENST00000221996 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 FBLN1P23142 703 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 NFKBIBQ15653 356 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 NME9Q86XW9 330 aa12.19□□□□□ -0.46
CRX-201ENST00000221996 UHRF1BP1LA0JNW5 1464 aa12.18□□□□□ -0.46
CRX-201ENST00000221996 TSPYL4Q9UJ04 414 aa12.18□□□□□ -0.46
CRX-201ENST00000221996 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
CRX-201ENST00000221996 ANKRD36BQ8N2N9 1353 aa12.18□□□□□ -0.46
CRX-201ENST00000221996 C22orf23Q9BZE7 217 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
CRX-201ENST00000221996 NSD2O96028 1365 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 FYB1O15117 783 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 MCCP23508 829 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 NFE2L2Q16236 605 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 ABCC1P33527 1531 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 GSE1Q14687 1217 aa12.17□□□□□ -0.46
CRX-201ENST00000221996 BCORL1Q5H9F3 1711 aa12.16□□□□□ -0.46
CRX-201ENST00000221996 TMEM57Q8N5G2 664 aa12.16□□□□□ -0.46
CRX-201ENST00000221996 CFAP65Q6ZU64 1925 aaKnown RBP12.16□□□□□ -0.46
CRX-201ENST00000221996 IGHDP01880 384 aa12.16□□□□□ -0.46
CRX-201ENST00000221996 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
CRX-201ENST00000221996 GBP4Q96PP9 640 aa12.16□□□□□ -0.46
CRX-201ENST00000221996 NPC1L1Q9UHC9 1359 aa12.16□□□□□ -0.46
CRX-201ENST00000221996 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
CRX-201ENST00000221996 MAGI2Q86UL8 1455 aa12.16□□□□□ -0.46
CRX-201ENST00000221996 KCNJ4P48050 445 aa12.15□□□□□ -0.46
CRX-201ENST00000221996 L1TD1Q5T7N2 865 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms