RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
LIM2-201ENST00000221973 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
LIM2-201ENST00000221973 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
LIM2-201ENST00000221973 LRRC59Q96AG4 307 aaKnown RBP23.56■■□□□ 1.36
LIM2-201ENST00000221973 TIMELESSQ9UNS1 1208 aa23.55■■□□□ 1.36
LIM2-201ENST00000221973 IFT172Q9UG01 1749 aa23.55■■□□□ 1.36
LIM2-201ENST00000221973 PNPLA6Q8IY17 1366 aa23.54■■□□□ 1.36
LIM2-201ENST00000221973 ZNF772Q68DY9 489 aaPredicted RBP23.54■■□□□ 1.36
LIM2-201ENST00000221973 ORAI2Q96SN7 254 aa23.54■■□□□ 1.36
LIM2-201ENST00000221973 STAC3Q96MF2 364 aa23.51■■□□□ 1.35
LIM2-201ENST00000221973 SOS2Q07890 1332 aaPredicted RBP23.5■■□□□ 1.35
LIM2-201ENST00000221973 MYOM2P54296 1465 aa23.49■■□□□ 1.35
LIM2-201ENST00000221973 AFF2P51816 1311 aa23.49■■□□□ 1.35
LIM2-201ENST00000221973 TECPR2O15040 1411 aa23.49■■□□□ 1.35
LIM2-201ENST00000221973 PIK3C2GO75747 1445 aa23.47■■□□□ 1.35
LIM2-201ENST00000221973 CDC42BPGQ6DT37 1551 aa23.47■■□□□ 1.35
LIM2-201ENST00000221973 LRPPRCP42704 1394 aaKnown RBP23.46■■□□□ 1.35
LIM2-201ENST00000221973 WAPLQ7Z5K2 1190 aa23.45■■□□□ 1.34
LIM2-201ENST00000221973 NRXN1Q9ULB1 1477 aa23.44■■□□□ 1.34
LIM2-201ENST00000221973 ABCC11Q96J66 1382 aa23.44■■□□□ 1.34
LIM2-201ENST00000221973 RXRBP28702 533 aa23.44■■□□□ 1.34
LIM2-201ENST00000221973 NBPF8Q3BBV2 869 aa23.44■■□□□ 1.34
LIM2-201ENST00000221973 TMEM132EQ6IEE7 984 aa23.44■■□□□ 1.34
LIM2-201ENST00000221973 STK26Q9P289 416 aa23.44■■□□□ 1.34
LIM2-201ENST00000221973 PLEKHH1Q9ULM0 1364 aa23.43■■□□□ 1.34
LIM2-201ENST00000221973 CDK12Q9NYV4 1490 aaPredicted RBP23.43■■□□□ 1.34
LIM2-201ENST00000221973 KNDC1Q76NI1 1749 aa23.42■■□□□ 1.34
LIM2-201ENST00000221973 C8orf37Q96NL8 207 aa23.42■■□□□ 1.34
LIM2-201ENST00000221973 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
LIM2-201ENST00000221973 UPF1Q92900 1129 aaKnown RBP eCLIP23.4■■□□□ 1.34
LIM2-201ENST00000221973 PXDNQ92626 1479 aa23.4■■□□□ 1.34
LIM2-201ENST00000221973 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
LIM2-201ENST00000221973 C14orf93Q9H972 538 aaKnown RBP23.39■■□□□ 1.33
LIM2-201ENST00000221973 COL22A1Q8NFW1 1626 aaPredicted RBP23.39■■□□□ 1.33
LIM2-201ENST00000221973 YTHDC2Q9H6S0 1430 aaKnown RBP23.39■■□□□ 1.33
LIM2-201ENST00000221973 ZEB1P37275 1124 aaPredicted RBP23.38■■□□□ 1.33
LIM2-201ENST00000221973 ADAMTS2O95450 1211 aa23.37■■□□□ 1.33
LIM2-201ENST00000221973 QTRT2Q9H974 415 aaKnown RBP23.36■■□□□ 1.33
LIM2-201ENST00000221973 NPHP3Q7Z494 1330 aa23.35■■□□□ 1.33
LIM2-201ENST00000221973 RGS12O14924 1447 aa23.34■■□□□ 1.33
LIM2-201ENST00000221973 FOXO3O43524 673 aa23.34■■□□□ 1.33
LIM2-201ENST00000221973 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
LIM2-201ENST00000221973 NGLY1Q96IV0 654 aa23.34■■□□□ 1.33
LIM2-201ENST00000221973 FMN2Q9NZ56 1722 aa23.33■■□□□ 1.33
LIM2-201ENST00000221973 NUTM2FA1L443 756 aa23.33■■□□□ 1.33
LIM2-201ENST00000221973 RBM6P78332 1123 aaKnown RBP23.33■■□□□ 1.33
LIM2-201ENST00000221973 SIRT1Q96EB6 747 aa23.33■■□□□ 1.33
LIM2-201ENST00000221973 XPCQ01831 940 aaPredicted RBP23.32■■□□□ 1.32
LIM2-201ENST00000221973 FNBP4Q8N3X1 1017 aaPredicted RBP23.31■■□□□ 1.32
LIM2-201ENST00000221973 ROCK2O75116 1388 aaKnown RBP23.3■■□□□ 1.32
LIM2-201ENST00000221973 RALGAPBQ86X10 1494 aa23.28■■□□□ 1.32
LIM2-201ENST00000221973 TRPM1Q7Z4N2 1603 aa23.27■■□□□ 1.32
LIM2-201ENST00000221973 USP21Q9UK80 565 aa23.27■■□□□ 1.32
LIM2-201ENST00000221973 ATRNO75882 1429 aa23.25■■□□□ 1.31
LIM2-201ENST00000221973 BCL9LQ86UU0 1499 aa23.25■■□□□ 1.31
LIM2-201ENST00000221973 RGPD8O14715 1765 aaPredicted RBP23.25■■□□□ 1.31
LIM2-201ENST00000221973 CARD11Q9BXL7 1154 aa23.25■■□□□ 1.31
LIM2-201ENST00000221973 KIF1AQ12756 1690 aa23.25■■□□□ 1.31
LIM2-201ENST00000221973 KIAA1210Q9ULL0 1709 aa23.25■■□□□ 1.31
LIM2-201ENST00000221973 MARF1Q9Y4F3 1742 aaKnown RBP23.25■■□□□ 1.31
LIM2-201ENST00000221973 ADGRB1O14514 1584 aa23.24■■□□□ 1.31
LIM2-201ENST00000221973 PRAM1Q96QH2 718 aa23.23■■□□□ 1.31
LIM2-201ENST00000221973 SPATA31A3Q5VYP0 1347 aa23.23■■□□□ 1.31
LIM2-201ENST00000221973 EP400Q96L91 3159 aa23.22■■□□□ 1.31
LIM2-201ENST00000221973 TRPC5Q9UL62 973 aaPredicted RBP23.22■■□□□ 1.31
LIM2-201ENST00000221973 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
LIM2-201ENST00000221973 GPRASP1Q5JY77 1395 aa23.22■■□□□ 1.31
LIM2-201ENST00000221973 DLC1Q96QB1 1528 aa23.22■■□□□ 1.31
LIM2-201ENST00000221973 SAFB2Q14151 953 aaKnown RBP eCLIP23.2■■□□□ 1.3
LIM2-201ENST00000221973 KRT28Q7Z3Y7 464 aa23.19■■□□□ 1.3
LIM2-201ENST00000221973 PHF8Q9UPP1 1060 aa23.19■■□□□ 1.3
LIM2-201ENST00000221973 USP32Q8NFA0 1604 aa23.19■■□□□ 1.3
LIM2-201ENST00000221973 ADGRB2O60241 1585 aa23.17■■□□□ 1.3
LIM2-201ENST00000221973 SLIT2O94813 1529 aa23.15■■□□□ 1.3
LIM2-201ENST00000221973 TNS3Q68CZ2 1445 aa23.15■■□□□ 1.3
LIM2-201ENST00000221973 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.13■■□□□ 1.29
LIM2-201ENST00000221973 POGKQ9P215 609 aa23.13■■□□□ 1.29
LIM2-201ENST00000221973 ANKARQ7Z5J8 1434 aa23.13■■□□□ 1.29
LIM2-201ENST00000221973 SRCAPQ6ZRS2 3230 aa23.12■■□□□ 1.29
LIM2-201ENST00000221973 SBNO1A3KN83 1393 aa23.12■■□□□ 1.29
LIM2-201ENST00000221973 GJD4Q96KN9 370 aaPredicted RBP23.11■■□□□ 1.29
LIM2-201ENST00000221973 ATAD2Q6PL18 1390 aa23.11■■□□□ 1.29
LIM2-201ENST00000221973 USP47Q96K76 1375 aa23.11■■□□□ 1.29
LIM2-201ENST00000221973 CABLES1Q8TDN4 633 aa23.1■■□□□ 1.29
LIM2-201ENST00000221973 HIRIP3Q9BW71 556 aaPredicted RBP23.1■■□□□ 1.29
LIM2-201ENST00000221973 PRR36Q9H6K5 1346 aa23.09■■□□□ 1.29
LIM2-201ENST00000221973 ABCA3Q99758 1704 aa23.09■■□□□ 1.29
LIM2-201ENST00000221973 PSME1Q06323 249 aa23.09■■□□□ 1.29
LIM2-201ENST00000221973 UNC5CLQ8IV45 518 aa23.09■■□□□ 1.29
LIM2-201ENST00000221973 PMFBP1Q8TBY8 1022 aa23.09■■□□□ 1.29
LIM2-201ENST00000221973 GLI3P10071 1580 aa23.09■■□□□ 1.29
LIM2-201ENST00000221973 EIF4G2P78344 907 aaKnown RBP eCLIP23.08■■□□□ 1.29
LIM2-201ENST00000221973 EIF3AQ14152 1382 aaKnown RBP23.08■■□□□ 1.29
LIM2-201ENST00000221973 TRPM3Q9HCF6 1732 aaPredicted RBP23.08■■□□□ 1.28
LIM2-201ENST00000221973 MINK1Q8N4C8 1332 aaPredicted RBP23.08■■□□□ 1.28
LIM2-201ENST00000221973 CENPJQ9HC77 1338 aaPredicted RBP23.07■■□□□ 1.28
LIM2-201ENST00000221973 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
LIM2-201ENST00000221973 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
LIM2-201ENST00000221973 TULP4Q9NRJ4 1543 aa23.05■■□□□ 1.28
LIM2-201ENST00000221973 ARHGEF10O15013 1369 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms