RNA–Protein interactions for RNA: ENST00000220772.7

SFRP1-201, Transcript of secreted frizzled related protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFRP1, Length 4,492 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFRP1-201ENST00000220772 CCDC141Q6ZP82 1450 aa20.27■□□□□ 0.83
SFRP1-201ENST00000220772 CSPP1Q1MSJ5 1256 aa20.27■□□□□ 0.83
SFRP1-201ENST00000220772 URB2Q14146 1524 aaKnown RBP20.26■□□□□ 0.83
SFRP1-201ENST00000220772 PHF14O94880 888 aa20.26■□□□□ 0.83
SFRP1-201ENST00000220772 GORABQ5T7V8 394 aa20.26■□□□□ 0.83
SFRP1-201ENST00000220772 LAMC3Q9Y6N6 1575 aa20.26■□□□□ 0.83
SFRP1-201ENST00000220772 INTS3Q68E01 1043 aaKnown RBP20.26■□□□□ 0.83
SFRP1-201ENST00000220772 WWC1Q8IX03 1113 aa20.26■□□□□ 0.83
SFRP1-201ENST00000220772 GNL2Q13823 731 aaKnown RBP20.25■□□□□ 0.83
SFRP1-201ENST00000220772 ANO2Q9NQ90 1003 aa20.25■□□□□ 0.83
SFRP1-201ENST00000220772 ARID3AQ99856 593 aa20.25■□□□□ 0.83
SFRP1-201ENST00000220772 TSPYL4Q9UJ04 414 aa20.25■□□□□ 0.83
SFRP1-201ENST00000220772 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.25■□□□□ 0.83
SFRP1-201ENST00000220772 UBE2Q2Q8WVN8 375 aa20.25■□□□□ 0.83
SFRP1-201ENST00000220772 HSP90B1P14625 803 aaKnown RBP20.24■□□□□ 0.83
SFRP1-201ENST00000220772 NOB1Q9ULX3 412 aaKnown RBP20.24■□□□□ 0.83
SFRP1-201ENST00000220772 NPHP1O15259 732 aa20.23■□□□□ 0.83
SFRP1-201ENST00000220772 CDC45O75419 566 aa20.23■□□□□ 0.83
SFRP1-201ENST00000220772 FAM69CQ0P6D2 419 aa20.23■□□□□ 0.83
SFRP1-201ENST00000220772 ATF7IPQ6VMQ6 1270 aa20.22■□□□□ 0.83
SFRP1-201ENST00000220772 NUCB2P80303 420 aa20.22■□□□□ 0.83
SFRP1-201ENST00000220772 DIAPH3Q9NSV4 1193 aa20.22■□□□□ 0.83
SFRP1-201ENST00000220772 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
SFRP1-201ENST00000220772 CABP1Q9NZU7 370 aa20.21■□□□□ 0.83
SFRP1-201ENST00000220772 C1orf115Q9H7X2 142 aa20.21■□□□□ 0.83
SFRP1-201ENST00000220772 C9orf78Q9NZ63 289 aaPredicted RBP20.21■□□□□ 0.83
SFRP1-201ENST00000220772 TWISTNBQ3B726 338 aaPredicted RBP20.2■□□□□ 0.82
SFRP1-201ENST00000220772 NINLQ9Y2I6 1382 aa20.2■□□□□ 0.82
SFRP1-201ENST00000220772 ATP6V1DQ9Y5K8 247 aa20.2■□□□□ 0.82
SFRP1-201ENST00000220772 CT47B1P0C2W7 299 aaPredicted RBP20.2■□□□□ 0.82
SFRP1-201ENST00000220772 TRAK2O60296 914 aa20.19■□□□□ 0.82
SFRP1-201ENST00000220772 C1orf141Q5JVX7 400 aa20.19■□□□□ 0.82
SFRP1-201ENST00000220772 GRIN2AQ12879 1464 aa20.19■□□□□ 0.82
SFRP1-201ENST00000220772 TAF7LQ5H9L4 462 aa20.18■□□□□ 0.82
SFRP1-201ENST00000220772 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
SFRP1-201ENST00000220772 RUFY2Q8WXA3 655 aa20.17■□□□□ 0.82
SFRP1-201ENST00000220772 CDK19Q9BWU1 502 aa20.17■□□□□ 0.82
SFRP1-201ENST00000220772 MCTP1Q6DN14 999 aa20.16■□□□□ 0.82
SFRP1-201ENST00000220772 DUSP27Q5VZP5 1158 aa20.16■□□□□ 0.82
SFRP1-201ENST00000220772 NSD3Q9BZ95 1437 aa20.16■□□□□ 0.82
SFRP1-201ENST00000220772 THOC2Q8NI27 1593 aaKnown RBP20.16■□□□□ 0.82
SFRP1-201ENST00000220772 GCC1Q96CN9 775 aa20.16■□□□□ 0.82
SFRP1-201ENST00000220772 MRE11P49959 708 aa20.15■□□□□ 0.82
SFRP1-201ENST00000220772 RAPGEF3O95398 923 aa20.15■□□□□ 0.82
SFRP1-201ENST00000220772 ZKSCAN1P17029 563 aaPredicted RBP20.15■□□□□ 0.82
SFRP1-201ENST00000220772 CCDC9Q9Y3X0 531 aaKnown RBP20.15■□□□□ 0.82
SFRP1-201ENST00000220772 RPGRIP1LQ68CZ1 1315 aa20.14■□□□□ 0.81
SFRP1-201ENST00000220772 KIF3AQ9Y496 699 aa20.14■□□□□ 0.81
SFRP1-201ENST00000220772 IFIT2P09913 472 aaKnown RBP20.13■□□□□ 0.81
SFRP1-201ENST00000220772 NEXNQ0ZGT2 675 aa20.13■□□□□ 0.81
SFRP1-201ENST00000220772 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
SFRP1-201ENST00000220772 TMPOP42166 694 aaKnown RBP20.13■□□□□ 0.81
SFRP1-201ENST00000220772 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
SFRP1-201ENST00000220772 ZNF608Q9ULD9 1512 aaPredicted RBP20.12■□□□□ 0.81
SFRP1-201ENST00000220772 RARSP54136 660 aaKnown RBP20.12■□□□□ 0.81
SFRP1-201ENST00000220772 NLRP6P59044 892 aa20.12■□□□□ 0.81
SFRP1-201ENST00000220772 TXNDC2Q86VQ3 553 aa20.12■□□□□ 0.81
SFRP1-201ENST00000220772 SULT6B1Q6IMI4 303 aa20.11■□□□□ 0.81
SFRP1-201ENST00000220772 DISP3Q9P2K9 1392 aa20.11■□□□□ 0.81
SFRP1-201ENST00000220772 NUTM2GQ5VZR2 741 aa20.11■□□□□ 0.81
SFRP1-201ENST00000220772 ADGRF5Q8IZF2 1346 aa20.1■□□□□ 0.81
SFRP1-201ENST00000220772 H3BQV1 296 aa20.1■□□□□ 0.81
SFRP1-201ENST00000220772 IFFO2Q5TF58 517 aa20.1■□□□□ 0.81
SFRP1-201ENST00000220772 FAM43AQ8N2R8 423 aa20.1■□□□□ 0.81
SFRP1-201ENST00000220772 SF3A1Q15459 793 aaKnown RBP20.1■□□□□ 0.81
SFRP1-201ENST00000220772 UBTFL1P0CB47 393 aaPredicted RBP20.1■□□□□ 0.81
SFRP1-201ENST00000220772 FAM184AQ8NB25 1140 aa20.1■□□□□ 0.81
SFRP1-201ENST00000220772 GNAI3P08754 354 aa20.09■□□□□ 0.81
SFRP1-201ENST00000220772 PSME1Q06323 249 aa20.09■□□□□ 0.81
SFRP1-201ENST00000220772 FCHSD2O94868 740 aa20.08■□□□□ 0.81
SFRP1-201ENST00000220772 CHD1LQ86WJ1 897 aa20.08■□□□□ 0.81
SFRP1-201ENST00000220772 HSP90AB4PQ58FF6 505 aa20.08■□□□□ 0.8
SFRP1-201ENST00000220772 TMEM57Q8N5G2 664 aa20.08■□□□□ 0.8
SFRP1-201ENST00000220772 NEK4P51957 841 aa20.08■□□□□ 0.8
SFRP1-201ENST00000220772 RABEP1Q15276 862 aa20.07■□□□□ 0.8
SFRP1-201ENST00000220772 ATAD2Q6PL18 1390 aa20.07■□□□□ 0.8
SFRP1-201ENST00000220772 G3BP1Q13283 466 aaKnown RBP eCLIP20.07■□□□□ 0.8
SFRP1-201ENST00000220772 TPM4P67936 248 aa20.07■□□□□ 0.8
SFRP1-201ENST00000220772 SMC3Q9UQE7 1217 aa20.07■□□□□ 0.8
SFRP1-201ENST00000220772 DDX58O95786 925 aaKnown RBP20.06■□□□□ 0.8
SFRP1-201ENST00000220772 SLC4A2P04920 1241 aa20.06■□□□□ 0.8
SFRP1-201ENST00000220772 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
SFRP1-201ENST00000220772 NKTRP30414 1462 aaKnown RBP20.06■□□□□ 0.8
SFRP1-201ENST00000220772 KIF14Q15058 1648 aa20.06■□□□□ 0.8
SFRP1-201ENST00000220772 VPS37CA5D8V6 355 aaPredicted RBP20.06■□□□□ 0.8
SFRP1-201ENST00000220772 SURF6O75683 361 aaKnown RBP20.05■□□□□ 0.8
SFRP1-201ENST00000220772 NASPP49321 788 aaPredicted RBP20.05■□□□□ 0.8
SFRP1-201ENST00000220772 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
SFRP1-201ENST00000220772 ZNF428Q96B54 188 aa20.05■□□□□ 0.8
SFRP1-201ENST00000220772 LRPPRCP42704 1394 aaKnown RBP20.04■□□□□ 0.8
SFRP1-201ENST00000220772 TTC5Q8N0Z6 440 aa20.04■□□□□ 0.8
SFRP1-201ENST00000220772 CCDC30Q5VVM6 783 aa20.04■□□□□ 0.8
SFRP1-201ENST00000220772 TULP1O00294 542 aaPredicted RBP20.04■□□□□ 0.8
SFRP1-201ENST00000220772 MCM4P33991 863 aa20.04■□□□□ 0.8
SFRP1-201ENST00000220772 THUMPD2Q9BTF0 503 aaKnown RBP20.04■□□□□ 0.8
SFRP1-201ENST00000220772 ERC2O15083 957 aa20.03■□□□□ 0.8
SFRP1-201ENST00000220772 ZNF692Q9BU19 519 aaPredicted RBP20.03■□□□□ 0.8
SFRP1-201ENST00000220772 RNF20Q5VTR2 975 aa20.02■□□□□ 0.8
SFRP1-201ENST00000220772 CAVIN1Q6NZI2 390 aaKnown RBP20.02■□□□□ 0.8
SFRP1-201ENST00000220772 TOMM22Q9NS69 142 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms