RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 APPP05067 770 aa17.1■□□□□ 0.33
SIX4-201ENST00000216513 UNC13AQ9UPW8 1703 aa17.1■□□□□ 0.33
SIX4-201ENST00000216513 LMTK3Q96Q04 1460 aa17.1■□□□□ 0.33
SIX4-201ENST00000216513 MYBBP1AQ9BQG0 1328 aaKnown RBP17.1■□□□□ 0.33
SIX4-201ENST00000216513 NCKAP5LQ9HCH0 1330 aa17.1■□□□□ 0.33
SIX4-201ENST00000216513 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
SIX4-201ENST00000216513 ZNF530Q6P9A1 599 aaPredicted RBP17.1■□□□□ 0.33
SIX4-201ENST00000216513 MSH6P52701 1360 aa17.09■□□□□ 0.33
SIX4-201ENST00000216513 DHX16O60231 1041 aaKnown RBP17.09■□□□□ 0.33
SIX4-201ENST00000216513 MTHFSP49914 203 aa17.09■□□□□ 0.33
SIX4-201ENST00000216513 PAXIP1Q6ZW49 1069 aaPredicted RBP17.09■□□□□ 0.33
SIX4-201ENST00000216513 CCAR1Q8IX12 1150 aaKnown RBP17.09■□□□□ 0.33
SIX4-201ENST00000216513 ARAP1Q96P48 1450 aa17.09■□□□□ 0.33
SIX4-201ENST00000216513 FOXD4L6Q3SYB3 417 aaPredicted RBP17.09■□□□□ 0.33
SIX4-201ENST00000216513 FOXD4L3Q6VB84 417 aaPredicted RBP17.09■□□□□ 0.33
SIX4-201ENST00000216513 TCEAL9Q9UHQ7 104 aa17.09■□□□□ 0.33
SIX4-201ENST00000216513 RASSF8Q8NHQ8 419 aa17.08■□□□□ 0.33
SIX4-201ENST00000216513 ERICH3Q5RHP9 1530 aa17.08■□□□□ 0.32
SIX4-201ENST00000216513 APAF1O14727 1248 aa17.08■□□□□ 0.32
SIX4-201ENST00000216513 NUDT16Q96DE0 195 aaKnown RBP17.08■□□□□ 0.32
SIX4-201ENST00000216513 DEKP35659 375 aaKnown RBP17.07■□□□□ 0.32
SIX4-201ENST00000216513 SLC12A5Q9H2X9 1139 aa17.07■□□□□ 0.32
SIX4-201ENST00000216513 NBPF1Q3BBV0 1214 aa17.07■□□□□ 0.32
SIX4-201ENST00000216513 PDE4CQ08493 712 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 CADPS2Q86UW7 1296 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 GAS2L2Q8NHY3 880 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 PHF8Q9UPP1 1060 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 RRS1Q15050 365 aaKnown RBP17.06■□□□□ 0.32
SIX4-201ENST00000216513 KRT28Q7Z3Y7 464 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 KIF14Q15058 1648 aa17.06■□□□□ 0.32
SIX4-201ENST00000216513 NEUROD6Q96NK8 337 aa17.05■□□□□ 0.32
SIX4-201ENST00000216513 TNRQ92752 1358 aa17.05■□□□□ 0.32
SIX4-201ENST00000216513 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
SIX4-201ENST00000216513 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
SIX4-201ENST00000216513 SULT6B1Q6IMI4 303 aa17.04■□□□□ 0.32
SIX4-201ENST00000216513 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
SIX4-201ENST00000216513 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
SIX4-201ENST00000216513 CCER2I3L3R5 266 aa17.03■□□□□ 0.32
SIX4-201ENST00000216513 IDI1Q13907 227 aa17.03■□□□□ 0.32
SIX4-201ENST00000216513 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
SIX4-201ENST00000216513 MYL6BP14649 208 aa17.03■□□□□ 0.32
SIX4-201ENST00000216513 CFAP44Q96MT7 982 aa17.03■□□□□ 0.32
SIX4-201ENST00000216513 CCDC141Q6ZP82 1450 aa17.02■□□□□ 0.32
SIX4-201ENST00000216513 CUL7Q14999 1698 aa17.02■□□□□ 0.32
SIX4-201ENST00000216513 LRPPRCP42704 1394 aaKnown RBP17.02■□□□□ 0.32
SIX4-201ENST00000216513 IFIT2P09913 472 aaKnown RBP17.01■□□□□ 0.31
SIX4-201ENST00000216513 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
SIX4-201ENST00000216513 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
SIX4-201ENST00000216513 DRC7Q8IY82 874 aa17■□□□□ 0.31
SIX4-201ENST00000216513 EXOC5O00471 708 aa17■□□□□ 0.31
SIX4-201ENST00000216513 ZPR1O75312 459 aa17■□□□□ 0.31
SIX4-201ENST00000216513 TMOD3Q9NYL9 352 aa17■□□□□ 0.31
SIX4-201ENST00000216513 PTCD1O75127 700 aaKnown RBP17■□□□□ 0.31
SIX4-201ENST00000216513 MTMR7Q9Y216 660 aa16.99■□□□□ 0.31
SIX4-201ENST00000216513 DAPK1P53355 1430 aa16.99■□□□□ 0.31
SIX4-201ENST00000216513 GNAI1P63096 354 aa16.99■□□□□ 0.31
SIX4-201ENST00000216513 PHF14O94880 888 aa16.99■□□□□ 0.31
SIX4-201ENST00000216513 PRKAR2BP31323 418 aa16.99■□□□□ 0.31
SIX4-201ENST00000216513 FAM135AQ9P2D6 1515 aa16.99■□□□□ 0.31
SIX4-201ENST00000216513 CHRNA2Q15822 529 aa16.98■□□□□ 0.31
SIX4-201ENST00000216513 RUNDC1Q96C34 613 aa16.98■□□□□ 0.31
SIX4-201ENST00000216513 HFM1A2PYH4 1435 aa16.98■□□□□ 0.31
SIX4-201ENST00000216513 LRRFIP1Q32MZ4 808 aaKnown RBP16.98■□□□□ 0.31
SIX4-201ENST00000216513 CCDC61Q9Y6R9 512 aa16.98■□□□□ 0.31
SIX4-201ENST00000216513 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
SIX4-201ENST00000216513 USHBP1Q8N6Y0 703 aa16.98■□□□□ 0.31
SIX4-201ENST00000216513 AKAP17AQ02040 695 aaKnown RBP16.97■□□□□ 0.31
SIX4-201ENST00000216513 IKQ13123 557 aaPredicted RBP16.97■□□□□ 0.31
SIX4-201ENST00000216513 CNNM1Q9NRU3 951 aa16.97■□□□□ 0.31
SIX4-201ENST00000216513 HMGB2P26583 209 aaKnown RBP16.97■□□□□ 0.31
SIX4-201ENST00000216513 SUPT6HQ7KZ85 1726 aaKnown RBP16.96■□□□□ 0.31
SIX4-201ENST00000216513 ZKSCAN2Q63HK3 967 aa16.95■□□□□ 0.3
SIX4-201ENST00000216513 ANKRD45Q5TZF3 282 aa16.95■□□□□ 0.3
SIX4-201ENST00000216513 CREBRFQ8IUR6 639 aa16.95■□□□□ 0.3
SIX4-201ENST00000216513 SYNE3Q6ZMZ3 975 aa16.95■□□□□ 0.3
SIX4-201ENST00000216513 E9PSI1 815 aa16.95■□□□□ 0.3
SIX4-201ENST00000216513 TSHZ2Q9NRE2 1034 aa16.95■□□□□ 0.3
SIX4-201ENST00000216513 ANKRD30BQ9BXX2 1392 aa16.95■□□□□ 0.3
SIX4-201ENST00000216513 AK7Q96M32 723 aa16.94■□□□□ 0.3
SIX4-201ENST00000216513 WWC3Q9ULE0 1092 aa16.94■□□□□ 0.3
SIX4-201ENST00000216513 CAMSAP2Q08AD1 1489 aa16.93■□□□□ 0.3
SIX4-201ENST00000216513 DIAPH3Q9NSV4 1193 aa16.93■□□□□ 0.3
SIX4-201ENST00000216513 WASHC4Q2M389 1173 aa16.92■□□□□ 0.3
SIX4-201ENST00000216513 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
SIX4-201ENST00000216513 CNKSR2Q8WXI2 1034 aa16.92■□□□□ 0.3
SIX4-201ENST00000216513 STARD3NLO95772 234 aa16.92■□□□□ 0.3
SIX4-201ENST00000216513 CCDC30Q5VVM6 783 aa16.92■□□□□ 0.3
SIX4-201ENST00000216513 KIAA1107Q9UPP5 1409 aa16.92■□□□□ 0.3
SIX4-201ENST00000216513 API5Q9BZZ5 524 aaKnown RBP16.91■□□□□ 0.3
SIX4-201ENST00000216513 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.91■□□□□ 0.3
SIX4-201ENST00000216513 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
SIX4-201ENST00000216513 WDR7Q9Y4E6 1490 aa16.9■□□□□ 0.3
SIX4-201ENST00000216513 UBTFL1P0CB47 393 aaPredicted RBP16.9■□□□□ 0.3
SIX4-201ENST00000216513 EXOC6Q8TAG9 804 aa16.9■□□□□ 0.3
SIX4-201ENST00000216513 PRM3Q9NNZ6 103 aa16.9■□□□□ 0.3
SIX4-201ENST00000216513 KIF21AQ7Z4S6 1674 aa16.89■□□□□ 0.29
SIX4-201ENST00000216513 KRI1Q8N9T8 703 aaKnown RBP16.89■□□□□ 0.29
SIX4-201ENST00000216513 MPHOSPH8Q99549 860 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms