RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 C1orf167Q5SNV9 1468 aa25.14■■□□□ 1.61
MRPL28-201ENST00000199706 COL16A1Q07092 1604 aaPredicted RBP25.13■■□□□ 1.61
MRPL28-201ENST00000199706 PLEKHH1Q9ULM0 1364 aa25.13■■□□□ 1.61
MRPL28-201ENST00000199706 FMN2Q9NZ56 1722 aa25.12■■□□□ 1.61
MRPL28-201ENST00000199706 BRINP3Q76B58 766 aa25.11■■□□□ 1.61
MRPL28-201ENST00000199706 TRPM1Q7Z4N2 1603 aa25.11■■□□□ 1.61
MRPL28-201ENST00000199706 CLSPNQ9HAW4 1339 aa25.11■■□□□ 1.61
MRPL28-201ENST00000199706 WAPLQ7Z5K2 1190 aa25.1■■□□□ 1.61
MRPL28-201ENST00000199706 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
MRPL28-201ENST00000199706 PRAM1Q96QH2 718 aa25.07■■□□□ 1.6
MRPL28-201ENST00000199706 PCGF6Q9BYE7 350 aa25.06■■□□□ 1.6
MRPL28-201ENST00000199706 TONSLQ96HA7 1378 aa25.05■■□□□ 1.6
MRPL28-201ENST00000199706 MED1Q15648 1581 aaPredicted RBP25.03■■□□□ 1.6
MRPL28-201ENST00000199706 POGKQ9P215 609 aa25.03■■□□□ 1.6
MRPL28-201ENST00000199706 TRAK1Q9UPV9 953 aa25.03■■□□□ 1.6
MRPL28-201ENST00000199706 KIF1AQ12756 1690 aa25.03■■□□□ 1.6
MRPL28-201ENST00000199706 SHPRHQ149N8 1683 aa25.03■■□□□ 1.6
MRPL28-201ENST00000199706 EIF3AQ14152 1382 aaKnown RBP25.02■■□□□ 1.6
MRPL28-201ENST00000199706 JCADQ9P266 1359 aa25.02■■□□□ 1.6
MRPL28-201ENST00000199706 ANKARQ7Z5J8 1434 aa25.02■■□□□ 1.6
MRPL28-201ENST00000199706 GPRASP1Q5JY77 1395 aa25■■□□□ 1.59
MRPL28-201ENST00000199706 NBPF1Q3BBV0 1214 aa24.99■■□□□ 1.59
MRPL28-201ENST00000199706 RALGAPBQ86X10 1494 aa24.97■■□□□ 1.59
MRPL28-201ENST00000199706 TULP4Q9NRJ4 1543 aa24.96■■□□□ 1.59
MRPL28-201ENST00000199706 USP32Q8NFA0 1604 aa24.96■■□□□ 1.59
MRPL28-201ENST00000199706 ROCK2O75116 1388 aaKnown RBP24.94■■□□□ 1.58
MRPL28-201ENST00000199706 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
MRPL28-201ENST00000199706 ORAI2Q96SN7 254 aa24.94■■□□□ 1.58
MRPL28-201ENST00000199706 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
MRPL28-201ENST00000199706 RGPD8O14715 1765 aaPredicted RBP24.93■■□□□ 1.58
MRPL28-201ENST00000199706 NPHP3Q7Z494 1330 aa24.93■■□□□ 1.58
MRPL28-201ENST00000199706 SPATA31A6Q5VVP1 1343 aa24.92■■□□□ 1.58
MRPL28-201ENST00000199706 PXDNQ92626 1479 aa24.92■■□□□ 1.58
MRPL28-201ENST00000199706 SAFB2Q14151 953 aaKnown RBP eCLIP24.92■■□□□ 1.58
MRPL28-201ENST00000199706 ITSN1Q15811 1721 aa24.92■■□□□ 1.58
MRPL28-201ENST00000199706 QRICH2Q9H0J4 1663 aa24.91■■□□□ 1.58
MRPL28-201ENST00000199706 ESCO1Q5FWF5 840 aa24.91■■□□□ 1.58
MRPL28-201ENST00000199706 LRRC59Q96AG4 307 aaKnown RBP24.91■■□□□ 1.58
MRPL28-201ENST00000199706 WASLO00401 505 aaPredicted RBP24.9■■□□□ 1.58
MRPL28-201ENST00000199706 NBPF8Q3BBV2 869 aa24.9■■□□□ 1.58
MRPL28-201ENST00000199706 MINK1Q8N4C8 1332 aaPredicted RBP24.89■■□□□ 1.58
MRPL28-201ENST00000199706 CENPJQ9HC77 1338 aaPredicted RBP24.89■■□□□ 1.58
MRPL28-201ENST00000199706 DISP3Q9P2K9 1392 aa24.89■■□□□ 1.57
MRPL28-201ENST00000199706 COL22A1Q8NFW1 1626 aaPredicted RBP24.87■■□□□ 1.57
MRPL28-201ENST00000199706 ATP7BP35670 1465 aa24.87■■□□□ 1.57
MRPL28-201ENST00000199706 TOPAZ1Q8N9V7 1692 aa24.86■■□□□ 1.57
MRPL28-201ENST00000199706 PNPLA6Q8IY17 1366 aa24.85■■□□□ 1.57
MRPL28-201ENST00000199706 SBNO2Q9Y2G9 1366 aa24.85■■□□□ 1.57
MRPL28-201ENST00000199706 HIRIP3Q9BW71 556 aaPredicted RBP24.84■■□□□ 1.57
MRPL28-201ENST00000199706 PHF8Q9UPP1 1060 aa24.84■■□□□ 1.57
MRPL28-201ENST00000199706 NUTM2FA1L443 756 aa24.82■■□□□ 1.56
MRPL28-201ENST00000199706 DDX17Q92841 729 aaKnown RBP24.82■■□□□ 1.56
MRPL28-201ENST00000199706 PRR36Q9H6K5 1346 aa24.82■■□□□ 1.56
MRPL28-201ENST00000199706 FOXO3O43524 673 aa24.81■■□□□ 1.56
MRPL28-201ENST00000199706 LRP6O75581 1613 aa24.8■■□□□ 1.56
MRPL28-201ENST00000199706 SBNO1A3KN83 1393 aa24.79■■□□□ 1.56
MRPL28-201ENST00000199706 CARD11Q9BXL7 1154 aa24.78■■□□□ 1.56
MRPL28-201ENST00000199706 CDK19Q9BWU1 502 aa24.77■■□□□ 1.56
MRPL28-201ENST00000199706 TRPM3Q9HCF6 1732 aaPredicted RBP24.77■■□□□ 1.56
MRPL28-201ENST00000199706 TNS3Q68CZ2 1445 aa24.76■■□□□ 1.55
MRPL28-201ENST00000199706 CCER1Q8TC90 406 aaPredicted RBP24.75■■□□□ 1.55
MRPL28-201ENST00000199706 NUDT16Q96DE0 195 aaKnown RBP24.75■■□□□ 1.55
MRPL28-201ENST00000199706 PSME1Q06323 249 aa24.74■■□□□ 1.55
MRPL28-201ENST00000199706 CCDC61Q9Y6R9 512 aa24.74■■□□□ 1.55
MRPL28-201ENST00000199706 SPATA31A3Q5VYP0 1347 aa24.74■■□□□ 1.55
MRPL28-201ENST00000199706 POLR3AO14802 1390 aaPredicted RBP24.74■■□□□ 1.55
MRPL28-201ENST00000199706 EVC2Q86UK5 1308 aa24.73■■□□□ 1.55
MRPL28-201ENST00000199706 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
MRPL28-201ENST00000199706 KRT28Q7Z3Y7 464 aa24.72■■□□□ 1.55
MRPL28-201ENST00000199706 ARHGEF10O15013 1369 aa24.71■■□□□ 1.55
MRPL28-201ENST00000199706 ALS2Q96Q42 1657 aa24.71■■□□□ 1.55
MRPL28-201ENST00000199706 PLEKHG3A1L390 1219 aa24.7■■□□□ 1.54
MRPL28-201ENST00000199706 SLC24A1O60721 1099 aa24.68■■□□□ 1.54
MRPL28-201ENST00000199706 XPCQ01831 940 aaPredicted RBP24.68■■□□□ 1.54
MRPL28-201ENST00000199706 PMFBP1Q8TBY8 1022 aa24.68■■□□□ 1.54
MRPL28-201ENST00000199706 MARF1Q9Y4F3 1742 aaKnown RBP24.68■■□□□ 1.54
MRPL28-201ENST00000199706 SRPK2P78362 688 aaKnown RBP24.67■■□□□ 1.54
MRPL28-201ENST00000199706 PPIP5K1Q6PFW1 1433 aa24.67■■□□□ 1.54
MRPL28-201ENST00000199706 BRD4O60885 1362 aaPredicted RBP24.67■■□□□ 1.54
MRPL28-201ENST00000199706 ATAD2Q6PL18 1390 aa24.67■■□□□ 1.54
MRPL28-201ENST00000199706 ABCA3Q99758 1704 aa24.66■■□□□ 1.54
MRPL28-201ENST00000199706 NGDNQ8NEJ9 315 aaKnown RBP24.65■■□□□ 1.54
MRPL28-201ENST00000199706 RGS17Q9UGC6 210 aaPredicted RBP24.65■■□□□ 1.54
MRPL28-201ENST00000199706 MEX3CQ5U5Q3 659 aaKnown RBP24.64■■□□□ 1.54
MRPL28-201ENST00000199706 PUS7Q96PZ0 661 aaKnown RBP24.64■■□□□ 1.54
MRPL28-201ENST00000199706 CABP2Q9NPB3 220 aa24.63■■□□□ 1.53
MRPL28-201ENST00000199706 ACEP12821 1306 aa24.61■■□□□ 1.53
MRPL28-201ENST00000199706 NUTM2BA6NNL0 878 aaPredicted RBP24.61■■□□□ 1.53
MRPL28-201ENST00000199706 NUTM2EB1AL46 878 aaPredicted RBP24.61■■□□□ 1.53
MRPL28-201ENST00000199706 NUTM2AQ8IVF1 878 aaPredicted RBP24.61■■□□□ 1.53
MRPL28-201ENST00000199706 USP47Q96K76 1375 aa24.61■■□□□ 1.53
MRPL28-201ENST00000199706 CRYBG1Q9Y4K1 1723 aa24.61■■□□□ 1.53
MRPL28-201ENST00000199706 ZNF772Q68DY9 489 aaPredicted RBP24.59■■□□□ 1.53
MRPL28-201ENST00000199706 TESK2Q96S53 571 aa24.59■■□□□ 1.53
MRPL28-201ENST00000199706 AKAP12Q02952 1782 aa24.59■■□□□ 1.53
MRPL28-201ENST00000199706 USP6P35125 1406 aa24.56■■□□□ 1.52
MRPL28-201ENST00000199706 ST20-MTHFSA0A0A6YYL1 179 aa24.56■■□□□ 1.52
MRPL28-201ENST00000199706 ILDR2Q71H61 639 aa24.56■■□□□ 1.52
MRPL28-201ENST00000199706 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.55■■□□□ 1.52
MRPL28-201ENST00000199706 NINLQ9Y2I6 1382 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms