RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 FANCAO15360 1455 aa26.04■■□□□ 1.76
RCN1-201ENST00000054950 TMEM132EQ6IEE7 984 aa26.03■■□□□ 1.76
RCN1-201ENST00000054950 MAPK8IP3Q9UPT6 1336 aa26.03■■□□□ 1.76
RCN1-201ENST00000054950 RUNDC1Q96C34 613 aa26.02■■□□□ 1.76
RCN1-201ENST00000054950 NLRP1Q9C000 1473 aa26.02■■□□□ 1.76
RCN1-201ENST00000054950 CFAP65Q6ZU64 1925 aaKnown RBP26.02■■□□□ 1.76
RCN1-201ENST00000054950 UHRF1BP1LA0JNW5 1464 aa26.02■■□□□ 1.76
RCN1-201ENST00000054950 IFT172Q9UG01 1749 aa26.02■■□□□ 1.76
RCN1-201ENST00000054950 MTHFSP49914 203 aa26■■□□□ 1.75
RCN1-201ENST00000054950 NGEFQ8N5V2 710 aa26■■□□□ 1.75
RCN1-201ENST00000054950 POGKQ9P215 609 aa26■■□□□ 1.75
RCN1-201ENST00000054950 NINLQ9Y2I6 1382 aa25.99■■□□□ 1.75
RCN1-201ENST00000054950 PDZRN3Q9UPQ7 1066 aa25.99■■□□□ 1.75
RCN1-201ENST00000054950 IQSEC2Q5JU85 1478 aa25.98■■□□□ 1.75
RCN1-201ENST00000054950 PPRC1Q5VV67 1664 aaKnown RBP25.98■■□□□ 1.75
RCN1-201ENST00000054950 MYO3AQ8NEV4 1616 aa25.98■■□□□ 1.75
RCN1-201ENST00000054950 ADGRL1O94910 1474 aa25.97■■□□□ 1.75
RCN1-201ENST00000054950 EFCAB6Q5THR3 1501 aa25.96■■□□□ 1.75
RCN1-201ENST00000054950 SLC24A1O60721 1099 aa25.96■■□□□ 1.75
RCN1-201ENST00000054950 NUTM2DQ5VT03 806 aaPredicted RBP25.95■■□□□ 1.74
RCN1-201ENST00000054950 SENP3Q9H4L4 574 aaPredicted RBP25.95■■□□□ 1.74
RCN1-201ENST00000054950 ARAP3Q8WWN8 1544 aa25.95■■□□□ 1.74
RCN1-201ENST00000054950 NEURL4Q96JN8 1562 aa25.95■■□□□ 1.74
RCN1-201ENST00000054950 NRXN1Q9ULB1 1477 aa25.94■■□□□ 1.74
RCN1-201ENST00000054950 SBNO2Q9Y2G9 1366 aa25.94■■□□□ 1.74
RCN1-201ENST00000054950 ABCA9Q8IUA7 1624 aa25.94■■□□□ 1.74
RCN1-201ENST00000054950 PMFBP1Q8TBY8 1022 aa25.94■■□□□ 1.74
RCN1-201ENST00000054950 PHF23Q9BUL5 403 aaPredicted RBP25.94■■□□□ 1.74
RCN1-201ENST00000054950 QRICH2Q9H0J4 1663 aa25.93■■□□□ 1.74
RCN1-201ENST00000054950 BECN1Q14457 450 aa25.92■■□□□ 1.74
RCN1-201ENST00000054950 SPRYD3Q8NCJ5 442 aa25.92■■□□□ 1.74
RCN1-201ENST00000054950 TSR2Q969E8 191 aaKnown RBP25.9■■□□□ 1.74
RCN1-201ENST00000054950 ZNF518AQ6AHZ1 1483 aa25.9■■□□□ 1.74
RCN1-201ENST00000054950 WDR63Q8IWG1 891 aa25.9■■□□□ 1.74
RCN1-201ENST00000054950 ZC3H13Q5T200 1668 aaKnown RBP25.89■■□□□ 1.74
RCN1-201ENST00000054950 U2AF1L5P0DN76 240 aaPredicted RBP25.89■■□□□ 1.74
RCN1-201ENST00000054950 U2AF1Q01081 240 aaKnown RBP eCLIP25.89■■□□□ 1.74
RCN1-201ENST00000054950 ADGRB3O60242 1522 aa25.88■■□□□ 1.73
RCN1-201ENST00000054950 TBC1D32Q96NH3 1257 aa25.88■■□□□ 1.73
RCN1-201ENST00000054950 TBC1D2Q9BYX2 928 aa25.88■■□□□ 1.73
RCN1-201ENST00000054950 ANTXR1Q9H6X2 564 aa25.87■■□□□ 1.73
RCN1-201ENST00000054950 C14orf93Q9H972 538 aaKnown RBP25.87■■□□□ 1.73
RCN1-201ENST00000054950 SAFB2Q14151 953 aaKnown RBP eCLIP25.86■■□□□ 1.73
RCN1-201ENST00000054950 KIDINS220Q9ULH0 1771 aa25.86■■□□□ 1.73
RCN1-201ENST00000054950 GGT6Q6P531 493 aa25.86■■□□□ 1.73
RCN1-201ENST00000054950 CFAP53Q96M91 514 aa25.85■■□□□ 1.73
RCN1-201ENST00000054950 ARXQ96QS3 562 aa25.85■■□□□ 1.73
RCN1-201ENST00000054950 UPF2Q9HAU5 1272 aaKnown RBP25.85■■□□□ 1.73
RCN1-201ENST00000054950 ADGRB1O14514 1584 aa25.85■■□□□ 1.73
RCN1-201ENST00000054950 SETBP1Q9Y6X0 1596 aa25.85■■□□□ 1.73
RCN1-201ENST00000054950 MVPQ14764 893 aaKnown RBP25.84■■□□□ 1.73
RCN1-201ENST00000054950 RWDD1Q9H446 243 aaPredicted RBP25.84■■□□□ 1.73
RCN1-201ENST00000054950 CABP2Q9NPB3 220 aa25.83■■□□□ 1.72
RCN1-201ENST00000054950 FTSJ3Q8IY81 847 aaKnown RBP25.82■■□□□ 1.72
RCN1-201ENST00000054950 NPATQ14207 1427 aa25.82■■□□□ 1.72
RCN1-201ENST00000054950 PPLO60437 1756 aa25.82■■□□□ 1.72
RCN1-201ENST00000054950 MYH16Q9H6N6 1097 aa25.81■■□□□ 1.72
RCN1-201ENST00000054950 CCDC27Q2M243 656 aa25.81■■□□□ 1.72
RCN1-201ENST00000054950 ZKSCAN2Q63HK3 967 aa25.8■■□□□ 1.72
RCN1-201ENST00000054950 DZIP1LQ8IYY4 767 aaKnown RBP25.79■■□□□ 1.72
RCN1-201ENST00000054950 U2SURPO15042 1029 aaKnown RBP25.79■■□□□ 1.72
RCN1-201ENST00000054950 PRKCSHP14314 528 aaPredicted RBP25.79■■□□□ 1.72
RCN1-201ENST00000054950 EXOSC9Q06265 439 aaKnown RBP25.79■■□□□ 1.72
RCN1-201ENST00000054950 SMC4Q9NTJ3 1288 aa25.78■■□□□ 1.72
RCN1-201ENST00000054950 MFAP1P55081 439 aaKnown RBP25.78■■□□□ 1.72
RCN1-201ENST00000054950 TULP4Q9NRJ4 1543 aa25.77■■□□□ 1.72
RCN1-201ENST00000054950 TRIM27P14373 513 aa25.76■■□□□ 1.71
RCN1-201ENST00000054950 AAMPQ13685 434 aa25.76■■□□□ 1.71
RCN1-201ENST00000054950 USP32Q8NFA0 1604 aa25.75■■□□□ 1.71
RCN1-201ENST00000054950 ITPRIPQ8IWB1 547 aa25.75■■□□□ 1.71
RCN1-201ENST00000054950 GGNBP2Q9H3C7 697 aa25.75■■□□□ 1.71
RCN1-201ENST00000054950 LMTK2Q8IWU2 1503 aa25.75■■□□□ 1.71
RCN1-201ENST00000054950 SSH1Q8WYL5 1049 aa25.74■■□□□ 1.71
RCN1-201ENST00000054950 CD109Q6YHK3 1445 aa25.74■■□□□ 1.71
RCN1-201ENST00000054950 GLI2P10070 1586 aa25.73■■□□□ 1.71
RCN1-201ENST00000054950 ANKRD36BQ8N2N9 1353 aa25.73■■□□□ 1.71
RCN1-201ENST00000054950 EVC2Q86UK5 1308 aa25.73■■□□□ 1.71
RCN1-201ENST00000054950 ASXL2Q76L83 1435 aa25.73■■□□□ 1.71
RCN1-201ENST00000054950 ADGRB2O60241 1585 aa25.72■■□□□ 1.71
RCN1-201ENST00000054950 STK26Q9P289 416 aa25.71■■□□□ 1.71
RCN1-201ENST00000054950 TRIM35Q9UPQ4 493 aa25.71■■□□□ 1.71
RCN1-201ENST00000054950 C22orf23Q9BZE7 217 aa25.71■■□□□ 1.71
RCN1-201ENST00000054950 GZF1Q9H116 711 aaPredicted RBP25.71■■□□□ 1.71
RCN1-201ENST00000054950 TMPOP42166 694 aaKnown RBP25.7■■□□□ 1.7
RCN1-201ENST00000054950 EIF5BO60841 1220 aaKnown RBP25.69■■□□□ 1.7
RCN1-201ENST00000054950 PLEKHF1Q96S99 279 aa25.69■■□□□ 1.7
RCN1-201ENST00000054950 NOB1Q9ULX3 412 aaKnown RBP25.69■■□□□ 1.7
RCN1-201ENST00000054950 ARHGEF28Q8N1W1 1705 aaKnown RBP25.69■■□□□ 1.7
RCN1-201ENST00000054950 FAM43AQ8N2R8 423 aa25.69■■□□□ 1.7
RCN1-201ENST00000054950 A0A1W2PP64 1363 aa25.68■■□□□ 1.7
RCN1-201ENST00000054950 ZMYM3Q14202 1370 aa25.68■■□□□ 1.7
RCN1-201ENST00000054950 FRMPD1Q5SYB0 1578 aa25.68■■□□□ 1.7
RCN1-201ENST00000054950 TMEM57Q8N5G2 664 aa25.67■■□□□ 1.7
RCN1-201ENST00000054950 SRPK2P78362 688 aaKnown RBP25.66■■□□□ 1.7
RCN1-201ENST00000054950 ATF7IPQ6VMQ6 1270 aa25.65■■□□□ 1.7
RCN1-201ENST00000054950 CAMSAP1Q5T5Y3 1602 aa25.65■■□□□ 1.7
RCN1-201ENST00000054950 SIGLEC1Q9BZZ2 1709 aa25.64■■□□□ 1.7
RCN1-201ENST00000054950 MCM4P33991 863 aa25.64■■□□□ 1.69
RCN1-201ENST00000054950 RRAGDQ9NQL2 400 aaPredicted RBP25.64■■□□□ 1.69
RCN1-201ENST00000054950 NSD2O96028 1365 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms