RNA–Protein interactions for RNA: ENST00000006275.8

TRAPPC6A-201, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6A, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-201ENST00000006275 HFM1A2PYH4 1435 aa28.32■■■□□ 2.12
TRAPPC6A-201ENST00000006275 NPHP3Q7Z494 1330 aa28.31■■■□□ 2.12
TRAPPC6A-201ENST00000006275 PRAG1Q86YV5 1406 aa28.31■■■□□ 2.12
TRAPPC6A-201ENST00000006275 COL22A1Q8NFW1 1626 aaPredicted RBP28.31■■■□□ 2.12
TRAPPC6A-201ENST00000006275 MYOM2P54296 1465 aa28.3■■■□□ 2.12
TRAPPC6A-201ENST00000006275 ESCO1Q5FWF5 840 aa28.3■■■□□ 2.12
TRAPPC6A-201ENST00000006275 CCDC125Q86Z20 511 aa28.28■■■□□ 2.12
TRAPPC6A-201ENST00000006275 BCL9LQ86UU0 1499 aa28.27■■■□□ 2.12
TRAPPC6A-201ENST00000006275 RPGRIP1LQ68CZ1 1315 aa28.26■■■□□ 2.11
TRAPPC6A-201ENST00000006275 XPCQ01831 940 aaPredicted RBP28.25■■■□□ 2.11
TRAPPC6A-201ENST00000006275 PXDNQ92626 1479 aa28.23■■■□□ 2.11
TRAPPC6A-201ENST00000006275 FOXO3O43524 673 aa28.23■■■□□ 2.11
TRAPPC6A-201ENST00000006275 GJD4Q96KN9 370 aaPredicted RBP28.23■■■□□ 2.11
TRAPPC6A-201ENST00000006275 CDC42BPGQ6DT37 1551 aa28.22■■■□□ 2.11
TRAPPC6A-201ENST00000006275 LRPPRCP42704 1394 aaKnown RBP28.19■■■□□ 2.1
TRAPPC6A-201ENST00000006275 EP400Q96L91 3159 aa28.19■■■□□ 2.1
TRAPPC6A-201ENST00000006275 NUTM2FA1L443 756 aa28.17■■■□□ 2.1
TRAPPC6A-201ENST00000006275 MARF1Q9Y4F3 1742 aaKnown RBP28.15■■■□□ 2.1
TRAPPC6A-201ENST00000006275 UNC5CLQ8IV45 518 aa28.14■■■□□ 2.1
TRAPPC6A-201ENST00000006275 SLC4A1APQ9BWU0 796 aaKnown RBP28.14■■■□□ 2.1
TRAPPC6A-201ENST00000006275 PPLO60437 1756 aa28.14■■■□□ 2.09
TRAPPC6A-201ENST00000006275 BLMP54132 1417 aaPredicted RBP28.13■■■□□ 2.09
TRAPPC6A-201ENST00000006275 STK26Q9P289 416 aa28.13■■■□□ 2.09
TRAPPC6A-201ENST00000006275 RALGAPBQ86X10 1494 aa28.12■■■□□ 2.09
TRAPPC6A-201ENST00000006275 WAPLQ7Z5K2 1190 aa28.11■■■□□ 2.09
TRAPPC6A-201ENST00000006275 SLIT2O94813 1529 aa28.09■■■□□ 2.09
TRAPPC6A-201ENST00000006275 ADGRF5Q8IZF2 1346 aa28.09■■■□□ 2.09
TRAPPC6A-201ENST00000006275 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.09■■■□□ 2.09
TRAPPC6A-201ENST00000006275 GLI3P10071 1580 aa28.08■■■□□ 2.09
TRAPPC6A-201ENST00000006275 SPATA31A3Q5VYP0 1347 aa28.08■■■□□ 2.09
TRAPPC6A-201ENST00000006275 TECPR2O15040 1411 aa28.08■■■□□ 2.09
TRAPPC6A-201ENST00000006275 SF3B2Q13435 895 aaKnown RBP28.06■■■□□ 2.08
TRAPPC6A-201ENST00000006275 DEFB132Q7Z7B7 95 aa28.06■■■□□ 2.08
TRAPPC6A-201ENST00000006275 CCDC144AA2RUR9 1427 aa28.05■■■□□ 2.08
TRAPPC6A-201ENST00000006275 PLEKHH1Q9ULM0 1364 aa28.04■■■□□ 2.08
TRAPPC6A-201ENST00000006275 HAP1P54257 671 aaPredicted RBP28.04■■■□□ 2.08
TRAPPC6A-201ENST00000006275 KRT28Q7Z3Y7 464 aa28.03■■■□□ 2.08
TRAPPC6A-201ENST00000006275 SEPT12Q8IYM1 358 aa28.03■■■□□ 2.08
TRAPPC6A-201ENST00000006275 ABCC11Q96J66 1382 aa28.02■■■□□ 2.08
TRAPPC6A-201ENST00000006275 RGL3Q3MIN7 710 aa28.02■■■□□ 2.08
TRAPPC6A-201ENST00000006275 USP32Q8NFA0 1604 aa28.01■■■□□ 2.07
TRAPPC6A-201ENST00000006275 TMEM132EQ6IEE7 984 aa28.01■■■□□ 2.07
TRAPPC6A-201ENST00000006275 KIF1AQ12756 1690 aa28■■■□□ 2.07
TRAPPC6A-201ENST00000006275 ANKRD30BQ9BXX2 1392 aa27.99■■■□□ 2.07
TRAPPC6A-201ENST00000006275 ACIN1Q9UKV3 1341 aaKnown RBP27.99■■■□□ 2.07
TRAPPC6A-201ENST00000006275 CCDC9Q9Y3X0 531 aaKnown RBP27.99■■■□□ 2.07
TRAPPC6A-201ENST00000006275 PLEKHG5O94827 1062 aa27.98■■■□□ 2.07
TRAPPC6A-201ENST00000006275 VPS72Q15906 364 aa27.98■■■□□ 2.07
TRAPPC6A-201ENST00000006275 FMN2Q9NZ56 1722 aa27.98■■■□□ 2.07
TRAPPC6A-201ENST00000006275 RAB3GAP2Q9H2M9 1393 aa27.97■■■□□ 2.07
TRAPPC6A-201ENST00000006275 TNS3Q68CZ2 1445 aa27.96■■■□□ 2.07
TRAPPC6A-201ENST00000006275 CABLES1Q8TDN4 633 aa27.96■■■□□ 2.07
TRAPPC6A-201ENST00000006275 BRWD3Q6RI45 1802 aa27.96■■■□□ 2.07
TRAPPC6A-201ENST00000006275 PSME1Q06323 249 aa27.95■■■□□ 2.06
TRAPPC6A-201ENST00000006275 PHF8Q9UPP1 1060 aa27.95■■■□□ 2.06
TRAPPC6A-201ENST00000006275 KNDC1Q76NI1 1749 aa27.95■■■□□ 2.06
TRAPPC6A-201ENST00000006275 YTHDC2Q9H6S0 1430 aaKnown RBP27.94■■■□□ 2.06
TRAPPC6A-201ENST00000006275 KRT27Q7Z3Y8 459 aa27.94■■■□□ 2.06
TRAPPC6A-201ENST00000006275 SPATA31E1Q6ZUB1 1445 aa27.93■■■□□ 2.06
TRAPPC6A-201ENST00000006275 LMOD2Q6P5Q4 547 aa27.93■■■□□ 2.06
TRAPPC6A-201ENST00000006275 MPHOSPH9Q99550 1183 aa27.93■■■□□ 2.06
TRAPPC6A-201ENST00000006275 PIK3C2GO75747 1445 aa27.92■■■□□ 2.06
TRAPPC6A-201ENST00000006275 ONECUT3O60422 494 aaPredicted RBP27.91■■■□□ 2.06
TRAPPC6A-201ENST00000006275 A0A0G2JS52 829 aa27.9■■■□□ 2.06
TRAPPC6A-201ENST00000006275 MYT1Q01538 1121 aa27.9■■■□□ 2.06
TRAPPC6A-201ENST00000006275 SBNO1A3KN83 1393 aa27.88■■■□□ 2.05
TRAPPC6A-201ENST00000006275 ARHGEF10O15013 1369 aa27.88■■■□□ 2.05
TRAPPC6A-201ENST00000006275 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
TRAPPC6A-201ENST00000006275 LRP5O75197 1615 aa27.88■■■□□ 2.05
TRAPPC6A-201ENST00000006275 PLCH1Q4KWH8 1693 aa27.87■■■□□ 2.05
TRAPPC6A-201ENST00000006275 BAG6P46379 1132 aa27.87■■■□□ 2.05
TRAPPC6A-201ENST00000006275 IFT172Q9UG01 1749 aa27.87■■■□□ 2.05
TRAPPC6A-201ENST00000006275 NWD2Q9ULI1 1742 aa27.87■■■□□ 2.05
TRAPPC6A-201ENST00000006275 PSDA5PKW4 1024 aaPredicted RBP27.86■■■□□ 2.05
TRAPPC6A-201ENST00000006275 NRXN1Q9ULB1 1477 aa27.84■■■□□ 2.05
TRAPPC6A-201ENST00000006275 FAM83GA6ND36 823 aa27.84■■■□□ 2.05
TRAPPC6A-201ENST00000006275 HRCP23327 699 aa27.82■■■□□ 2.04
TRAPPC6A-201ENST00000006275 SAFB2Q14151 953 aaKnown RBP eCLIP27.82■■■□□ 2.04
TRAPPC6A-201ENST00000006275 RGPD8O14715 1765 aaPredicted RBP27.81■■■□□ 2.04
TRAPPC6A-201ENST00000006275 FAM98CQ17RN3 349 aaKnown RBP27.81■■■□□ 2.04
TRAPPC6A-201ENST00000006275 C14orf93Q9H972 538 aaKnown RBP27.81■■■□□ 2.04
TRAPPC6A-201ENST00000006275 DHX57Q6P158 1386 aaKnown RBP27.81■■■□□ 2.04
TRAPPC6A-201ENST00000006275 ABCA3Q99758 1704 aa27.81■■■□□ 2.04
TRAPPC6A-201ENST00000006275 PMFBP1Q8TBY8 1022 aa27.79■■■□□ 2.04
TRAPPC6A-201ENST00000006275 PRAM1Q96QH2 718 aa27.79■■■□□ 2.04
TRAPPC6A-201ENST00000006275 CFAP70Q5T0N1 1121 aa27.77■■■□□ 2.04
TRAPPC6A-201ENST00000006275 BTG4Q9NY30 223 aa27.77■■■□□ 2.04
TRAPPC6A-201ENST00000006275 POGKQ9P215 609 aa27.75■■■□□ 2.03
TRAPPC6A-201ENST00000006275 ANKARQ7Z5J8 1434 aa27.75■■■□□ 2.03
TRAPPC6A-201ENST00000006275 EN1Q05925 392 aaPredicted RBP27.74■■■□□ 2.03
TRAPPC6A-201ENST00000006275 NRAPQ86VF7 1730 aa27.72■■■□□ 2.03
TRAPPC6A-201ENST00000006275 FAM182BQ5T319 152 aa27.71■■■□□ 2.03
TRAPPC6A-201ENST00000006275 GPRASP1Q5JY77 1395 aa27.7■■■□□ 2.02
TRAPPC6A-201ENST00000006275 R3HDM1Q15032 1099 aaKnown RBP27.69■■■□□ 2.02
TRAPPC6A-201ENST00000006275 SPATA31A5Q5VU36 1347 aa27.67■■■□□ 2.02
TRAPPC6A-201ENST00000006275 SPATA31A7Q8IWB4 1347 aa27.67■■■□□ 2.02
TRAPPC6A-201ENST00000006275 COL14A1Q05707 1796 aaKnown RBP27.67■■■□□ 2.02
TRAPPC6A-201ENST00000006275 DLC1Q96QB1 1528 aa27.67■■■□□ 2.02
TRAPPC6A-201ENST00000006275 HIRIP3Q9BW71 556 aaPredicted RBP27.66■■■□□ 2.02
TRAPPC6A-201ENST00000006275 RGPD1P0DJD0 1748 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms