RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CCDC61Q9Y6R9 512 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 ASXL2Q76L83 1435 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 PPP2R1AP30153 589 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 RRP1P56182 461 aaKnown RBP12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 KLHL34Q8N239 644 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 RILPL2Q969X0 211 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 COG6Q9Y2V7 657 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 IFIT2P09913 472 aaKnown RBP12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 PRKAR2BP31323 418 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 HSP90AB4PQ58FF6 505 aa12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 CENPQQ7L2Z9 268 aaPredicted RBP12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
NIPAL3-201ENST00000003912 KIF3AQ9Y496 699 aa12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 NUDT16Q96DE0 195 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 AIMP1Q12904 312 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 CHMP4CQ96CF2 233 aa12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 TRIM34Q9BYJ4 488 aa12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 DHX29Q7Z478 1369 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 CEBPAP49715 358 aaPredicted RBP12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 NBPF8Q3BBV2 869 aa12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 CCDC34Q96HJ3 373 aa12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
NIPAL3-201ENST00000003912 KCNH5Q8NCM2 988 aa12.78□□□□□ -0.36
NIPAL3-201ENST00000003912 CCDC30Q5VVM6 783 aa12.78□□□□□ -0.36
NIPAL3-201ENST00000003912 FBXO31Q5XUX0 539 aaPredicted RBP12.78□□□□□ -0.36
NIPAL3-201ENST00000003912 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
NIPAL3-201ENST00000003912 PTMSP20962 102 aa12.78□□□□□ -0.36
NIPAL3-201ENST00000003912 GBP4Q96PP9 640 aa12.78□□□□□ -0.36
NIPAL3-201ENST00000003912 DIAPH3Q9NSV4 1193 aa12.78□□□□□ -0.36
NIPAL3-201ENST00000003912 PNISRQ8TF01 805 aaKnown RBP12.77□□□□□ -0.36
NIPAL3-201ENST00000003912 RUFY2Q8WXA3 655 aa12.77□□□□□ -0.36
NIPAL3-201ENST00000003912 PLIN1O60240 522 aa12.77□□□□□ -0.37
NIPAL3-201ENST00000003912 KIF6Q6ZMV9 814 aa12.77□□□□□ -0.37
NIPAL3-201ENST00000003912 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.37
NIPAL3-201ENST00000003912 HMGB2P26583 209 aaKnown RBP12.77□□□□□ -0.37
NIPAL3-201ENST00000003912 ST18O60284 1047 aa12.77□□□□□ -0.37
NIPAL3-201ENST00000003912 CABP4P57796 275 aa12.77□□□□□ -0.37
NIPAL3-201ENST00000003912 SULT6B1Q6IMI4 303 aa12.76□□□□□ -0.37
NIPAL3-201ENST00000003912 IDI1Q13907 227 aa12.76□□□□□ -0.37
NIPAL3-201ENST00000003912 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
NIPAL3-201ENST00000003912 ZNF530Q6P9A1 599 aaPredicted RBP12.76□□□□□ -0.37
NIPAL3-201ENST00000003912 DDX54Q8TDD1 881 aaKnown RBP12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 FBXW7Q969H0 707 aa12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 AMOTL2Q9Y2J4 779 aa12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 PLCH2O75038 1416 aa12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 NCOA1Q15788 1441 aa12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 RAPGEF6Q8TEU7 1601 aa12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 DNTTIP2Q5QJE6 756 aaKnown RBP12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
NIPAL3-201ENST00000003912 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
NIPAL3-201ENST00000003912 WDR7Q9Y4E6 1490 aa12.74□□□□□ -0.37
NIPAL3-201ENST00000003912 ATP10BO94823 1461 aa12.74□□□□□ -0.37
NIPAL3-201ENST00000003912 SYNE3Q6ZMZ3 975 aa12.74□□□□□ -0.37
NIPAL3-201ENST00000003912 WAPLQ7Z5K2 1190 aa12.74□□□□□ -0.37
NIPAL3-201ENST00000003912 TNRQ92752 1358 aa12.73□□□□□ -0.37
NIPAL3-201ENST00000003912 FAM135AQ9P2D6 1515 aa12.73□□□□□ -0.37
NIPAL3-201ENST00000003912 AAMPQ13685 434 aa12.73□□□□□ -0.37
NIPAL3-201ENST00000003912 CSPP1Q1MSJ5 1256 aa12.73□□□□□ -0.37
NIPAL3-201ENST00000003912 RASSF8Q8NHQ8 419 aa12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 AKAP17AQ02040 695 aaKnown RBP12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 MARCH6O60337 910 aa12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 ZC3H6P61129 1189 aaKnown RBP12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 EXOC6Q8TAG9 804 aa12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 PHF8Q9UPP1 1060 aa12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 LRPPRCP42704 1394 aaKnown RBP12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 ERC2O15083 957 aa12.72□□□□□ -0.37
NIPAL3-201ENST00000003912 THOC2Q8NI27 1593 aaKnown RBP12.71□□□□□ -0.37
NIPAL3-201ENST00000003912 APPP05067 770 aa12.71□□□□□ -0.37
NIPAL3-201ENST00000003912 NOL8Q76FK4 1167 aaKnown RBP12.71□□□□□ -0.37
NIPAL3-201ENST00000003912 GPATCH8Q9UKJ3 1502 aaKnown RBP12.71□□□□□ -0.37
NIPAL3-201ENST00000003912 GNAI3P08754 354 aa12.71□□□□□ -0.37
NIPAL3-201ENST00000003912 CTDP1Q9Y5B0 961 aaPredicted RBP12.71□□□□□ -0.37
NIPAL3-201ENST00000003912 SYAP1Q96A49 352 aaPredicted RBP12.71□□□□□ -0.38
NIPAL3-201ENST00000003912 ADAMTS12P58397 1594 aa12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 ZKSCAN1P17029 563 aaPredicted RBP12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 GLIPR1L2Q4G1C9 344 aa12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 CPLX2Q6PUV4 134 aaKnown RBP12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 VPS53Q5VIR6 699 aa12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 WWC1Q8IX03 1113 aa12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 ZNF518AQ6AHZ1 1483 aa12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 REC8O95072 547 aa12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 RRS1Q15050 365 aaKnown RBP12.7□□□□□ -0.38
NIPAL3-201ENST00000003912 KDM5BQ9UGL1 1544 aa12.69□□□□□ -0.38
NIPAL3-201ENST00000003912 TWISTNBQ3B726 338 aaPredicted RBP12.69□□□□□ -0.38
NIPAL3-201ENST00000003912 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
NIPAL3-201ENST00000003912 HDGFL1Q5TGJ6 251 aa12.69□□□□□ -0.38
NIPAL3-201ENST00000003912 SLKQ9H2G2 1235 aaPredicted RBP12.69□□□□□ -0.38
NIPAL3-201ENST00000003912 WASLO00401 505 aaPredicted RBP12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 TRDNQ13061 729 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 DRC7Q8IY82 874 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 FAM177BA6PVY3 158 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 RNF20Q5VTR2 975 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 CADPS2Q86UW7 1296 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 WDR62O43379 1518 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 UGGT2Q9NYU1 1516 aa12.68□□□□□ -0.38
NIPAL3-201ENST00000003912 ADGRF5Q8IZF2 1346 aa12.67□□□□□ -0.38
NIPAL3-201ENST00000003912 FAM184AQ8NB25 1140 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms