RNA–Protein interactions for RNA: YPR189W

SKI3, Transcript of Ski complex component and TPR protein, yeast

Gene SKI3, Length 4,299 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI3	YPR189W	GCV3	P39726	170 aa	Predicted RBP	0.92	□□□□□ -2.26
SKI3	YPR189W	SNA2	P56508	79 aa		0.92	□□□□□ -2.26
SKI3	YPR189W	MRPL38	P35996	138 aa	Predicted RBP	0.92	□□□□□ -2.26
SKI3	YPR189W	SUS1	Q6WNK7	96 aa		0.92	□□□□□ -2.26
SKI3	YPR189W	RPS11A	P0CX47	156 aa	Known RBP	0.92	□□□□□ -2.26
SKI3	YPR189W	RPS11B	P0CX48	156 aa	Known RBP	0.92	□□□□□ -2.26
SKI3	YPR189W	CWP2	P43497	92 aa		0.92	□□□□□ -2.26
SKI3	YPR189W	TOM7	P53507	60 aa		0.92	□□□□□ -2.26
SKI3	YPR189W	YPR203W	Q08994	102 aa		0.92	□□□□□ -2.26
SKI3	YPR189W	SRB6	P32570	121 aa		0.91	□□□□□ -2.26
SKI3	YPR189W	LSM6	Q06406	86 aa	Known RBP	0.91	□□□□□ -2.26
SKI3	YPR189W	YBR032W	P38223	100 aa		0.91	□□□□□ -2.26
SKI3	YPR189W	SHU1	P38751	150 aa		0.91	□□□□□ -2.26
SKI3	YPR189W	YHL005C	P38752	130 aa		0.91	□□□□□ -2.26
SKI3	YPR189W	ICY1	Q04329	127 aa		0.91	□□□□□ -2.26
SKI3	YPR189W	IMP2	P46972	177 aa		0.9	□□□□□ -2.26
SKI3	YPR189W	CCW12	Q12127	133 aa		0.9	□□□□□ -2.26
SKI3	YPR189W	RSM18	P40033	138 aa		0.9	□□□□□ -2.27
SKI3	YPR189W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.9	□□□□□ -2.27
SKI3	YPR189W	AQY2	P0CD90	149 aa		0.9	□□□□□ -2.27
SKI3	YPR189W	YCR095W-A	Q3E787	52 aa		0.9	□□□□□ -2.27
SKI3	YPR189W	ENV10	Q99382	181 aa		0.9	□□□□□ -2.27
SKI3	YPR189W	RPA12	P32529	125 aa	Known RBP	0.89	□□□□□ -2.27
SKI3	YPR189W	LCL2	Q08045	131 aa		0.89	□□□□□ -2.27
SKI3	YPR189W	POC4	Q12245	148 aa	Predicted RBP	0.89	□□□□□ -2.27
SKI3	YPR189W	Q0032	Q9ZZX7	96 aa		0.89	□□□□□ -2.27
SKI3	YPR189W	YCR001W	P25347	104 aa		0.89	□□□□□ -2.27
SKI3	YPR189W	RPL39	P04650	51 aa		0.89	□□□□□ -2.27
SKI3	YPR189W	YCR085W	P25650	117 aa		0.89	□□□□□ -2.27
SKI3	YPR189W	ICS3	P47034	131 aa		0.89	□□□□□ -2.27
SKI3	YPR189W	MIC27	P50945	234 aa		0.89	□□□□□ -2.27
SKI3	YPR189W	MRPS12	P53732	153 aa		0.88	□□□□□ -2.27
SKI3	YPR189W	YOL118C	Q08259	102 aa		0.88	□□□□□ -2.27
SKI3	YPR189W	PAU6	P0CE90	120 aa		0.88	□□□□□ -2.27
SKI3	YPR189W	PAU18	P0CE91	120 aa		0.88	□□□□□ -2.27
SKI3	YPR189W	NHP2	P32495	156 aa	Predicted RBP	0.88	□□□□□ -2.27
SKI3	YPR189W	YLR157W-D	P0CE99	70 aa		0.88	□□□□□ -2.27
SKI3	YPR189W	MRP17	P28778	131 aa		0.88	□□□□□ -2.27
SKI3	YPR189W	LSM2	P38203	95 aa	Known RBP	0.88	□□□□□ -2.27
SKI3	YPR189W	IRC21	Q04772	201 aa		0.87	□□□□□ -2.27
SKI3	YPR189W	YLR307C-A	Q3E825	87 aa		0.87	□□□□□ -2.27
SKI3	YPR189W	YBL071C	P38185	102 aa		0.86	□□□□□ -2.27
SKI3	YPR189W	YNL122C	P53921	115 aa	Predicted RBP	0.86	□□□□□ -2.27
SKI3	YPR189W	YJL009W	P47078	108 aa		0.86	□□□□□ -2.27
SKI3	YPR189W	COX9	P07255	59 aa		0.86	□□□□□ -2.27
SKI3	YPR189W	YDR210W	Q03482	75 aa		0.86	□□□□□ -2.27
SKI3	YPR189W	YOR072W	Q08486	104 aa		0.86	□□□□□ -2.27
SKI3	YPR189W	YGL258W-A	Q3E740	77 aa		0.86	□□□□□ -2.27
SKI3	YPR189W	PDX3	P38075	228 aa	Known RBP	0.86	□□□□□ -2.27
SKI3	YPR189W	YLR255C	O13574	117 aa		0.85	□□□□□ -2.27
SKI3	YPR189W	YPL038W-A	Q3E7B4	63 aa		0.85	□□□□□ -2.27
SKI3	YPR189W	YNR034W-A	Q3E841	98 aa		0.85	□□□□□ -2.27
SKI3	YPR189W	ATX1	P38636	73 aa		0.85	□□□□□ -2.27
SKI3	YPR189W	YAR064W	P39563	99 aa		0.85	□□□□□ -2.27
SKI3	YPR189W	YOR011W-A	Q3E807	68 aa		0.85	□□□□□ -2.27
SKI3	YPR189W	PAU8	P0CE92	120 aa		0.84	□□□□□ -2.27
SKI3	YPR189W	PAU11	P0CE93	120 aa		0.84	□□□□□ -2.27
SKI3	YPR189W	TOM6	P33448	61 aa		0.84	□□□□□ -2.27
SKI3	YPR189W	PAU13	P38725	120 aa		0.84	□□□□□ -2.27
SKI3	YPR189W	PAU4	P53427	120 aa		0.84	□□□□□ -2.27
SKI3	YPR189W	PAU10	Q03050	120 aa		0.84	□□□□□ -2.27
SKI3	YPR189W	PAU9	Q3E770	120 aa		0.84	□□□□□ -2.27
SKI3	YPR189W	YOL013W-A	P0C272	63 aa	Predicted RBP	0.84	□□□□□ -2.27
SKI3	YPR189W	SMX2	P40204	77 aa	Known RBP	0.84	□□□□□ -2.28
SKI3	YPR189W	MRPL31	P14063	131 aa	Predicted RBP	0.84	□□□□□ -2.28
SKI3	YPR189W	MRX7	P53869	86 aa		0.84	□□□□□ -2.28
SKI3	YPR189W	YDR119W-A	Q2V2P9	66 aa		0.83	□□□□□ -2.28
SKI3	YPR189W	TIM12	P32830	109 aa		0.83	□□□□□ -2.28
SKI3	YPR189W	PAU1	P0CE88	120 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	PAU14	P0CE89	120 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	YDR381C-A	Q3E6R5	114 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	YNL042W-B	Q3E7Z2	85 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	HUG1	Q6Q5K6	68 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	MVB12	P42939	101 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	MGR2	Q02889	113 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	PAI3	P01094	68 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	YIL102C	P40488	101 aa		0.82	□□□□□ -2.28
SKI3	YPR189W	BSC4	P53841	131 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	PAU20	Q08322	120 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	YER188C-A	P0C0V2	99 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	YBL039W-B	P0C268	59 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	AUA1	P32450	94 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	PAU23	Q07987	124 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	PAU17	Q12370	124 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	SWM2	P40342	146 aa		0.81	□□□□□ -2.28
SKI3	YPR189W	YHR173C	P38864	112 aa		0.8	□□□□□ -2.28
SKI3	YPR189W	YBR292C	P38357	123 aa		0.8	□□□□□ -2.28
SKI3	YPR189W	YOR105W	Q08504	108 aa		0.8	□□□□□ -2.28
SKI3	YPR189W	YIL156W-B	Q2V2P4	73 aa		0.8	□□□□□ -2.28
SKI3	YPR189W	YMR122W-A	Q3E842	84 aa		0.8	□□□□□ -2.28
SKI3	YPR189W	HHY1	P39982	102 aa		0.79	□□□□□ -2.28
SKI3	YPR189W	FPR2	P32472	135 aa		0.79	□□□□□ -2.28
SKI3	YPR189W	YJR128W	P47162	119 aa		0.79	□□□□□ -2.28
SKI3	YPR189W	YOR314W	Q12506	109 aa		0.79	□□□□□ -2.28
SKI3	YPR189W	YGR121W-A	Q3E816	71 aa		0.79	□□□□□ -2.28
SKI3	YPR189W	YOR072W-B	Q3E832	53 aa		0.79	□□□□□ -2.28
SKI3	YPR189W	NOP10	Q6Q547	58 aa	Predicted RBP	0.79	□□□□□ -2.28
SKI3	YPR189W	YMR007W	Q03675	126 aa		0.78	□□□□□ -2.28
SKI3	YPR189W	YKL018C-A	Q3E7A7	99 aa		0.78	□□□□□ -2.28
SKI3	YPR189W	HUA1	P40325	198 aa		0.78	□□□□□ -2.28

Retrieved 100 of 5,963 RNA–protein pairs in 56 ms