RNA–Protein interactions for RNA: YPL194W

DDC1, Transcript of DNA damage checkpoint protein, yeastyeast

Gene DDC1, Length 1,839 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDC1YPL194W YDR246W-AQ3E763 66 aa3.65□□□□□ -1.83
DDC1YPL194W RPS11AP0CX47 156 aaKnown RBP3.63□□□□□ -1.83
DDC1YPL194W RPS11BP0CX48 156 aaKnown RBP3.63□□□□□ -1.83
DDC1YPL194W PRM7Q12459 698 aa3.63□□□□□ -1.83
DDC1YPL194W ACC1Q00955 2233 aaKnown RBP3.62□□□□□ -1.83
DDC1YPL194W BPH1P25356 2167 aa3.61□□□□□ -1.83
DDC1YPL194W YKL023C-AQ2V2P3 75 aa3.6□□□□□ -1.83
DDC1YPL194W COA3Q3E7B2 85 aa3.6□□□□□ -1.83
DDC1YPL194W YBR219CP38317 127 aa3.6□□□□□ -1.83
DDC1YPL194W FIG2P25653 1609 aa3.59□□□□□ -1.83
DDC1YPL194W YGR240C-AQ3E786 66 aa3.58□□□□□ -1.84
DDC1YPL194W STT4P37297 1900 aa3.58□□□□□ -1.84
DDC1YPL194W YDL022C-AP0C5L6 82 aa3.57□□□□□ -1.84
DDC1YPL194W YCL042WP25572 119 aa3.57□□□□□ -1.84
DDC1YPL194W PAU7P39545 55 aa3.57□□□□□ -1.84
DDC1YPL194W FLO1P32768 1537 aa3.56□□□□□ -1.84
DDC1YPL194W YLR255CO13574 117 aa3.55□□□□□ -1.84
DDC1YPL194W YKL018C-AQ3E7A7 99 aa3.55□□□□□ -1.84
DDC1YPL194W HKR1P41809 1802 aa3.54□□□□□ -1.84
DDC1YPL194W SMX2P40204 77 aaKnown RBP3.54□□□□□ -1.84
DDC1YPL194W YOR032W-AQ8TGS1 66 aa3.54□□□□□ -1.84
DDC1YPL194W BRR2P32639 2163 aaKnown RBP3.53□□□□□ -1.84
DDC1YPL194W YNL042W-BQ3E7Z2 85 aa3.52□□□□□ -1.85
DDC1YPL194W YNL146C-AQ3E7Z1 64 aa3.51□□□□□ -1.85
DDC1YPL194W MOT1P32333 1867 aa3.5□□□□□ -1.85
DDC1YPL194W AQY2P0CD90 149 aa3.49□□□□□ -1.85
DDC1YPL194W SLH1P53327 1967 aaKnown RBP3.48□□□□□ -1.85
DDC1YPL194W YOR034C-AQ3E735 80 aa3.48□□□□□ -1.85
DDC1YPL194W YMR122W-AQ3E842 84 aa3.47□□□□□ -1.85
DDC1YPL194W EDC1P53080 175 aaPredicted RBP3.47□□□□□ -1.85
DDC1YPL194W MGR2Q02889 113 aa3.47□□□□□ -1.85
DDC1YPL194W YPR096CO13587 100 aa3.46□□□□□ -1.86
DDC1YPL194W YNL190WP53872 204 aa3.46□□□□□ -1.86
DDC1YPL194W YDR182W-AQ3E796 67 aa3.46□□□□□ -1.86
DDC1YPL194W LCL1Q02786 101 aa3.44□□□□□ -1.86
DDC1YPL194W RPS30AP0CX33 63 aaKnown RBP3.44□□□□□ -1.86
DDC1YPL194W RPS30BP0CX34 63 aaKnown RBP3.44□□□□□ -1.86
DDC1YPL194W YJL009WP47078 108 aa3.44□□□□□ -1.86
DDC1YPL194W YBR201C-AQ2V2Q3 67 aa3.43□□□□□ -1.86
DDC1YPL194W SGF11Q03067 99 aa3.42□□□□□ -1.86
DDC1YPL194W YHR086W-AQ3E746 53 aa3.42□□□□□ -1.86
DDC1YPL194W YIL086CP40503 102 aa3.42□□□□□ -1.86
DDC1YPL194W ATP17Q06405 101 aa3.42□□□□□ -1.86
DDC1YPL194W YNL122CP53921 115 aaPredicted RBP3.41□□□□□ -1.86
DDC1YPL194W YOR192C-CQ3E736 78 aa3.41□□□□□ -1.86
DDC1YPL194W SHU1P38751 150 aa3.4□□□□□ -1.86
DDC1YPL194W YMR007WQ03675 126 aa3.4□□□□□ -1.86
DDC1YPL194W YCR001WP25347 104 aa3.4□□□□□ -1.87
DDC1YPL194W YBR032WP38223 100 aa3.4□□□□□ -1.87
DDC1YPL194W Q0032Q9ZZX7 96 aa3.38□□□□□ -1.87
DDC1YPL194W YOL166W-AQ8TGJ1 51 aa3.37□□□□□ -1.87
DDC1YPL194W MVB12P42939 101 aa3.37□□□□□ -1.87
DDC1YPL194W HUB1Q6Q546 73 aa3.36□□□□□ -1.87
DDC1YPL194W ATP18P81450 59 aa3.35□□□□□ -1.87
DDC1YPL194W YDL012CQ12489 107 aa3.34□□□□□ -1.87
DDC1YPL194W SDH6Q3E785 79 aa3.31□□□□□ -1.88
DDC1YPL194W YHR212W-AP0CX91 67 aa3.3□□□□□ -1.88
DDC1YPL194W HUG1Q6Q5K6 68 aa3.3□□□□□ -1.88
DDC1YPL194W YOL097W-AQ3E7Y9 61 aa3.29□□□□□ -1.88
DDC1YPL194W BLM10P43583 2143 aa3.28□□□□□ -1.88
DDC1YPL194W YOR072WQ08486 104 aa3.28□□□□□ -1.88
DDC1YPL194W YOL013W-AP0C272 63 aaPredicted RBP3.27□□□□□ -1.89
DDC1YPL194W BEM2P39960 2167 aaKnown RBP3.25□□□□□ -1.89
DDC1YPL194W COX7P10174 60 aa3.24□□□□□ -1.89
DDC1YPL194W SEC16P48415 2195 aaKnown RBP3.24□□□□□ -1.89
DDC1YPL194W YAR064WP39563 99 aa3.23□□□□□ -1.89
DDC1YPL194W YJR128WP47162 119 aa3.23□□□□□ -1.89
DDC1YPL194W POL2P21951 2222 aaKnown RBP3.22□□□□□ -1.89
DDC1YPL194W YMR141CP40211 102 aa3.22□□□□□ -1.89
DDC1YPL194W YLR146W-AQ2V2P1 62 aa3.21□□□□□ -1.89
DDC1YPL194W FAB1P34756 2278 aa3.21□□□□□ -1.9
DDC1YPL194W HFA1P32874 2273 aa3.21□□□□□ -1.9
DDC1YPL194W YJR107C-AP0CT86 78 aa3.2□□□□□ -1.9
DDC1YPL194W YPR108W-AQ3E7B3 70 aa3.2□□□□□ -1.9
DDC1YPL194W YMR001C-AQ8TGS9 76 aa3.19□□□□□ -1.9
DDC1YPL194W YLR157W-DP0CE99 70 aa3.17□□□□□ -1.9
DDC1YPL194W YBL039W-BP0C268 59 aa3.16□□□□□ -1.9
DDC1YPL194W YDR524C-BQ3E6R4 66 aa3.14□□□□□ -1.91
DDC1YPL194W RPC10P40422 70 aa3.13□□□□□ -1.91
DDC1YPL194W YBR200W-AQ3E755 54 aa3.12□□□□□ -1.91
DDC1YPL194W HHY1P39982 102 aa3.12□□□□□ -1.91
DDC1YPL194W RPL38P49167 78 aaKnown RBP3.12□□□□□ -1.91
DDC1YPL194W TOM1Q03280 3268 aa3.11□□□□□ -1.91
DDC1YPL194W YIL102CP40488 101 aa3.07□□□□□ -1.92
DDC1YPL194W GIS2P53849 153 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
DDC1YPL194W YOR011W-AQ3E807 68 aa3.07□□□□□ -1.92
DDC1YPL194W YBR072C-AQ3E794 53 aa3.05□□□□□ -1.92
DDC1YPL194W AUA1P32450 94 aa3□□□□□ -1.93
DDC1YPL194W YOR394C-AQ8TGJ0 55 aa3□□□□□ -1.93
DDC1YPL194W URA2P07259 2214 aaKnown RBP2.99□□□□□ -1.93
DDC1YPL194W VPS13Q07878 3144 aa2.98□□□□□ -1.93
DDC1YPL194W TAO3P40468 2376 aa2.98□□□□□ -1.93
DDC1YPL194W YPR010C-AA5Z2X5 72 aa2.97□□□□□ -1.93
DDC1YPL194W YHR213W-BQ8TGK1 99 aa2.97□□□□□ -1.93
DDC1YPL194W COX9P07255 59 aa2.96□□□□□ -1.94
DDC1YPL194W YGR025WP53216 100 aa2.96□□□□□ -1.94
DDC1YPL194W RPS27AP35997 82 aaKnown RBP2.94□□□□□ -1.94
DDC1YPL194W NCE101Q02820 53 aa2.91□□□□□ -1.94
DDC1YPL194W HUA1P40325 198 aa2.91□□□□□ -1.94
DDC1YPL194W OLI1P61829 76 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 7.8 ms