RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YGL193CP53097 103 aa1.76□□□□□ -2.13
DNL4YOR005C YLR285C-AQ3E771 56 aa1.76□□□□□ -2.13
DNL4YOR005C FMP27Q06179 2628 aa1.76□□□□□ -2.13
DNL4YOR005C UTP20P35194 2493 aaKnown RBP1.76□□□□□ -2.13
DNL4YOR005C ATP18P81450 59 aa1.76□□□□□ -2.13
DNL4YOR005C YPR013CQ12145 317 aa1.76□□□□□ -2.13
DNL4YOR005C YLL006W-AQ3E814 58 aa1.76□□□□□ -2.13
DNL4YOR005C AIM4P38305 123 aaPredicted RBP1.76□□□□□ -2.13
DNL4YOR005C GAT4P40569 121 aa1.76□□□□□ -2.13
DNL4YOR005C ICY1Q04329 127 aa1.76□□□□□ -2.13
DNL4YOR005C HOR7Q05827 59 aa1.76□□□□□ -2.13
DNL4YOR005C VAM10Q08474 114 aa1.76□□□□□ -2.13
DNL4YOR005C YMR175W-AQ3E766 64 aa1.76□□□□□ -2.13
DNL4YOR005C VPS13Q07878 3144 aa1.75□□□□□ -2.13
DNL4YOR005C RPL29P05747 59 aaPredicted RBP1.75□□□□□ -2.13
DNL4YOR005C RPS11AP0CX47 156 aaKnown RBP1.75□□□□□ -2.13
DNL4YOR005C RPS11BP0CX48 156 aaKnown RBP1.75□□□□□ -2.13
DNL4YOR005C UBC4P15731 148 aa1.75□□□□□ -2.13
DNL4YOR005C YFR035CP43608 114 aa1.75□□□□□ -2.13
DNL4YOR005C YDL241WQ07738 123 aa1.75□□□□□ -2.13
DNL4YOR005C YIR020CP40575 100 aa1.75□□□□□ -2.13
DNL4YOR005C YDR246W-AQ3E763 66 aa1.75□□□□□ -2.13
DNL4YOR005C YOR381W-AQ3E804 55 aa1.75□□□□□ -2.13
DNL4YOR005C YAL065CO13511 128 aa1.74□□□□□ -2.13
DNL4YOR005C ERI1P62651 68 aaKnown RBP1.74□□□□□ -2.13
DNL4YOR005C YOR314WQ12506 109 aa1.74□□□□□ -2.13
DNL4YOR005C YDR182W-AQ3E796 67 aa1.74□□□□□ -2.13
DNL4YOR005C DDR48P18899 430 aaKnown RBP1.74□□□□□ -2.13
DNL4YOR005C TDA2P40045 126 aa1.74□□□□□ -2.13
DNL4YOR005C YMR122W-AQ3E842 84 aa1.74□□□□□ -2.13
DNL4YOR005C SFT1P43682 97 aa1.73□□□□□ -2.13
DNL4YOR005C YPR195CQ06594 109 aa1.73□□□□□ -2.13
DNL4YOR005C YOR034C-AQ3E735 80 aa1.73□□□□□ -2.13
DNL4YOR005C KSH1Q8TGJ3 72 aa1.73□□□□□ -2.13
DNL4YOR005C TOR2P32600 2474 aaKnown RBP1.73□□□□□ -2.13
DNL4YOR005C YBR219CP38317 127 aa1.73□□□□□ -2.13
DNL4YOR005C RDS3Q06835 107 aaPredicted RBP1.73□□□□□ -2.13
DNL4YOR005C YGR240C-AQ3E786 66 aa1.73□□□□□ -2.13
DNL4YOR005C HFA1P32874 2273 aa1.73□□□□□ -2.13
DNL4YOR005C RPL36BO14455 100 aaKnown RBP1.72□□□□□ -2.13
DNL4YOR005C RPL36AP05745 100 aaPredicted RBP1.72□□□□□ -2.13
DNL4YOR005C LIP1Q03579 150 aa1.72□□□□□ -2.13
DNL4YOR005C YNL277W-AQ3E7Z0 62 aa1.72□□□□□ -2.13
DNL4YOR005C YFR009W-AP0C5M9 85 aa1.72□□□□□ -2.13
DNL4YOR005C RSM18P40033 138 aa1.72□□□□□ -2.13
DNL4YOR005C YPR010C-AA5Z2X5 72 aa1.72□□□□□ -2.13
DNL4YOR005C RPL43AP0CX25 92 aaKnown RBP1.71□□□□□ -2.14
DNL4YOR005C RPL43BP0CX26 92 aa1.71□□□□□ -2.14
DNL4YOR005C MVB12P42939 101 aa1.71□□□□□ -2.14
DNL4YOR005C RPL38P49167 78 aaKnown RBP1.71□□□□□ -2.14
DNL4YOR005C EDC1P53080 175 aaPredicted RBP1.71□□□□□ -2.14
DNL4YOR005C COX23P38824 151 aa1.71□□□□□ -2.14
DNL4YOR005C YBL039W-BP0C268 59 aa1.7□□□□□ -2.14
DNL4YOR005C RPC10P40422 70 aa1.7□□□□□ -2.14
DNL4YOR005C YLR162WQ06235 118 aa1.7□□□□□ -2.14
DNL4YOR005C YKL065W-AQ2V2P2 73 aa1.7□□□□□ -2.14
DNL4YOR005C NOP10Q6Q547 58 aaPredicted RBP1.7□□□□□ -2.14
DNL4YOR005C TAR1Q8TGM6 124 aa1.7□□□□□ -2.14
DNL4YOR005C FYV5P25585 152 aa1.7□□□□□ -2.14
DNL4YOR005C ICS3P47034 131 aa1.7□□□□□ -2.14
DNL4YOR005C AQY2P0CD90 149 aa1.69□□□□□ -2.14
DNL4YOR005C YJL144WP47009 104 aa1.69□□□□□ -2.14
DNL4YOR005C YDL012CQ12489 107 aa1.69□□□□□ -2.14
DNL4YOR005C YOL166W-AQ8TGJ1 51 aa1.69□□□□□ -2.14
DNL4YOR005C BPH1P25356 2167 aa1.69□□□□□ -2.14
DNL4YOR005C YHL005CP38752 130 aa1.68□□□□□ -2.14
DNL4YOR005C YBR230W-AQ3E762 66 aa1.68□□□□□ -2.14
DNL4YOR005C YGR121W-AQ3E816 71 aa1.68□□□□□ -2.14
DNL4YOR005C YLR307C-AQ3E825 87 aa1.67□□□□□ -2.14
DNL4YOR005C YJL127C-BQ3E828 52 aa1.67□□□□□ -2.14
DNL4YOR005C YNL042W-BQ3E7Z2 85 aa1.67□□□□□ -2.14
DNL4YOR005C YHR213W-BQ8TGK1 99 aa1.67□□□□□ -2.14
DNL4YOR005C RPL33AP05744 107 aaKnown RBP1.67□□□□□ -2.14
DNL4YOR005C SPC1P46965 94 aa1.67□□□□□ -2.14
DNL4YOR005C GIS2P53849 153 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
DNL4YOR005C COX8P04039 78 aa1.66□□□□□ -2.14
DNL4YOR005C RPS30AP0CX33 63 aaKnown RBP1.66□□□□□ -2.14
DNL4YOR005C RPS30BP0CX34 63 aaKnown RBP1.66□□□□□ -2.14
DNL4YOR005C YHR212W-AP0CX91 67 aa1.66□□□□□ -2.14
DNL4YOR005C SPG1P50088 95 aa1.66□□□□□ -2.14
DNL4YOR005C YJL133C-AQ3E7A3 74 aa1.66□□□□□ -2.14
DNL4YOR005C YGR035W-AQ45U48 73 aa1.66□□□□□ -2.14
DNL4YOR005C Q0297Q9ZZV8 51 aa1.66□□□□□ -2.14
DNL4YOR005C YAL064WP39711 94 aa1.66□□□□□ -2.14
DNL4YOR005C SGF11Q03067 99 aa1.66□□□□□ -2.14
DNL4YOR005C HUB1Q6Q546 73 aa1.66□□□□□ -2.14
DNL4YOR005C CSF1Q12150 2958 aa1.65□□□□□ -2.14
DNL4YOR005C YCR001WP25347 104 aa1.65□□□□□ -2.14
DNL4YOR005C OST5Q92316 86 aa1.65□□□□□ -2.14
DNL4YOR005C MIC10Q96VH5 97 aa1.65□□□□□ -2.14
DNL4YOR005C YIL102CP40488 101 aa1.65□□□□□ -2.15
DNL4YOR005C YMR122CQ03879 124 aa1.65□□□□□ -2.15
DNL4YOR005C YER188C-AP0C0V2 99 aa1.64□□□□□ -2.15
DNL4YOR005C YOL013W-AP0C272 63 aaPredicted RBP1.64□□□□□ -2.15
DNL4YOR005C YGL041C-BQ3E750 60 aa1.64□□□□□ -2.15
DNL4YOR005C DDR2P89113 61 aa1.64□□□□□ -2.15
DNL4YOR005C RRT15Q3E811 62 aa1.64□□□□□ -2.15
DNL4YOR005C Q0032Q9ZZX7 96 aa1.64□□□□□ -2.15
DNL4YOR005C SDH6Q3E785 79 aa1.63□□□□□ -2.15
DNL4YOR005C RTC6O14464 93 aa1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms