RNA–Protein interactions for RNA: YNR001C

CIT1, Transcript of Citrate synthase, yeastyeast

Gene CIT1, Length 1,440 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT1YNR001C ERI1P62651 68 aaKnown RBP2.68□□□□□ -1.98
CIT1YNR001C YOR268CQ08734 132 aa2.68□□□□□ -1.98
CIT1YNR001C YMR105W-AQ8TGS8 64 aa2.68□□□□□ -1.98
CIT1YNR001C YEL067CP39978 195 aa2.67□□□□□ -1.98
CIT1YNR001C PRM7Q12459 698 aa2.67□□□□□ -1.98
CIT1YNR001C YBR200W-AQ3E755 54 aa2.67□□□□□ -1.98
CIT1YNR001C YNL146C-AQ3E7Z1 64 aa2.67□□□□□ -1.98
CIT1YNR001C UBC4P15731 148 aa2.66□□□□□ -1.98
CIT1YNR001C AIM4P38305 123 aaPredicted RBP2.66□□□□□ -1.98
CIT1YNR001C YIL046W-AQ3E7Z4 54 aa2.66□□□□□ -1.98
CIT1YNR001C YPR010C-AA5Z2X5 72 aa2.65□□□□□ -1.99
CIT1YNR001C ATP20Q12233 115 aa2.65□□□□□ -1.99
CIT1YNR001C YKL065W-AQ2V2P2 73 aa2.65□□□□□ -1.99
CIT1YNR001C YDR182W-AQ3E796 67 aa2.65□□□□□ -1.99
CIT1YNR001C YDL022C-AP0C5L6 82 aa2.64□□□□□ -1.99
CIT1YNR001C YEL008WP40001 126 aa2.64□□□□□ -1.99
CIT1YNR001C YNL190WP53872 204 aa2.64□□□□□ -1.99
CIT1YNR001C ATP18P81450 59 aa2.64□□□□□ -1.99
CIT1YNR001C YLR236CA0A023PZG4 107 aa2.63□□□□□ -1.99
CIT1YNR001C YKR045CP36138 183 aa2.63□□□□□ -1.99
CIT1YNR001C RPL33BP41056 107 aaKnown RBP2.63□□□□□ -1.99
CIT1YNR001C RPL38P49167 78 aaKnown RBP2.63□□□□□ -1.99
CIT1YNR001C MRPS12P53732 153 aa2.63□□□□□ -1.99
CIT1YNR001C YDL241WQ07738 123 aa2.63□□□□□ -1.99
CIT1YNR001C YMR175W-AQ3E766 64 aa2.63□□□□□ -1.99
CIT1YNR001C RPL36BO14455 100 aaKnown RBP2.62□□□□□ -1.99
CIT1YNR001C RPL36AP05745 100 aaPredicted RBP2.62□□□□□ -1.99
CIT1YNR001C SPC1P46965 94 aa2.62□□□□□ -1.99
CIT1YNR001C SED1Q01589 338 aa2.62□□□□□ -1.99
CIT1YNR001C LIP1Q03579 150 aa2.62□□□□□ -1.99
CIT1YNR001C ICY1Q04329 127 aa2.62□□□□□ -1.99
CIT1YNR001C YHL037CP38733 133 aa2.61□□□□□ -1.99
CIT1YNR001C YFR035CP43608 114 aa2.61□□□□□ -1.99
CIT1YNR001C SPG1P50088 95 aa2.61□□□□□ -1.99
CIT1YNR001C MPC3P53311 146 aa2.61□□□□□ -1.99
CIT1YNR001C VAM10Q08474 114 aa2.61□□□□□ -1.99
CIT1YNR001C YCL048W-AQ2V2Q2 79 aa2.61□□□□□ -1.99
CIT1YNR001C YOR011W-AQ3E807 68 aa2.61□□□□□ -1.99
CIT1YNR001C YLL006W-AQ3E814 58 aa2.61□□□□□ -1.99
CIT1YNR001C HUB1Q6Q546 73 aa2.61□□□□□ -1.99
CIT1YNR001C KSH1Q8TGJ3 72 aa2.61□□□□□ -1.99
CIT1YNR001C YAL065CO13511 128 aa2.6□□□□□ -1.99
CIT1YNR001C RPL29P05747 59 aaPredicted RBP2.6□□□□□ -1.99
CIT1YNR001C RSM18P40033 138 aa2.6□□□□□ -1.99
CIT1YNR001C HOR7Q05827 59 aa2.6□□□□□ -1.99
CIT1YNR001C YMR122W-AQ3E842 84 aa2.6□□□□□ -1.99
CIT1YNR001C RPS11AP0CX47 156 aaKnown RBP2.59□□□□□ -1.99
CIT1YNR001C RPS11BP0CX48 156 aaKnown RBP2.59□□□□□ -1.99
CIT1YNR001C YIR020CP40575 100 aa2.59□□□□□ -1.99
CIT1YNR001C YGR240C-AQ3E786 66 aa2.59□□□□□ -1.99
CIT1YNR001C YOR381W-AQ3E804 55 aa2.58□□□□□ -2
CIT1YNR001C YBL039W-BP0C268 59 aa2.57□□□□□ -2
CIT1YNR001C AQY2P0CD90 149 aa2.57□□□□□ -2
CIT1YNR001C YHL005CP38752 130 aa2.57□□□□□ -2
CIT1YNR001C MVB12P42939 101 aa2.57□□□□□ -2
CIT1YNR001C RDS3Q06835 107 aaPredicted RBP2.57□□□□□ -2
CIT1YNR001C DDR48P18899 430 aaKnown RBP2.56□□□□□ -2
CIT1YNR001C FYV5P25585 152 aa2.56□□□□□ -2
CIT1YNR001C COX23P38824 151 aa2.56□□□□□ -2
CIT1YNR001C YPR013CQ12145 317 aa2.56□□□□□ -2
CIT1YNR001C OST5Q92316 86 aa2.56□□□□□ -2
CIT1YNR001C YIL102CP40488 101 aa2.55□□□□□ -2
CIT1YNR001C GAT4P40569 121 aa2.55□□□□□ -2
CIT1YNR001C ICS3P47034 131 aa2.55□□□□□ -2
CIT1YNR001C YOR034C-AQ3E735 80 aa2.55□□□□□ -2
CIT1YNR001C YGL041C-BQ3E750 60 aa2.55□□□□□ -2
CIT1YNR001C YLR307C-AQ3E825 87 aa2.55□□□□□ -2
CIT1YNR001C YFR009W-AP0C5M9 85 aa2.54□□□□□ -2
CIT1YNR001C NOP10Q6Q547 58 aaPredicted RBP2.54□□□□□ -2
CIT1YNR001C RPC10P40422 70 aa2.53□□□□□ -2
CIT1YNR001C YLR162WQ06235 118 aa2.53□□□□□ -2
CIT1YNR001C SDH6Q3E785 79 aa2.53□□□□□ -2
CIT1YNR001C YJL127C-BQ3E828 52 aa2.53□□□□□ -2
CIT1YNR001C YPR195CQ06594 109 aa2.52□□□□□ -2.01
CIT1YNR001C YNL042W-BQ3E7Z2 85 aa2.52□□□□□ -2.01
CIT1YNR001C YHR213W-BQ8TGK1 99 aa2.52□□□□□ -2.01
CIT1YNR001C MIC10Q96VH5 97 aa2.52□□□□□ -2.01
CIT1YNR001C Q0032Q9ZZX7 96 aa2.52□□□□□ -2.01
CIT1YNR001C RPS30AP0CX33 63 aaKnown RBP2.51□□□□□ -2.01
CIT1YNR001C RPS30BP0CX34 63 aaKnown RBP2.51□□□□□ -2.01
CIT1YNR001C YMR122CQ03879 124 aa2.51□□□□□ -2.01
CIT1YNR001C YCR095W-AQ3E787 52 aa2.51□□□□□ -2.01
CIT1YNR001C SGF11Q03067 99 aa2.51□□□□□ -2.01
CIT1YNR001C YDR246W-AQ3E763 66 aa2.51□□□□□ -2.01
CIT1YNR001C YJL133C-AQ3E7A3 74 aa2.51□□□□□ -2.01
CIT1YNR001C YBR219CP38317 127 aa2.5□□□□□ -2.01
CIT1YNR001C YBR230W-AQ3E762 66 aa2.5□□□□□ -2.01
CIT1YNR001C YER188C-AP0C0V2 99 aa2.49□□□□□ -2.01
CIT1YNR001C YLR157W-DP0CE99 70 aa2.49□□□□□ -2.01
CIT1YNR001C EDC1P53080 175 aaPredicted RBP2.49□□□□□ -2.01
CIT1YNR001C YGR025WP53216 100 aa2.49□□□□□ -2.01
CIT1YNR001C DDR2P89113 61 aa2.49□□□□□ -2.01
CIT1YNR001C YGR121W-AQ3E816 71 aa2.49□□□□□ -2.01
CIT1YNR001C BPH1P25356 2167 aa2.49□□□□□ -2.01
CIT1YNR001C YOL166W-AQ8TGJ1 51 aa2.48□□□□□ -2.01
CIT1YNR001C YMR001C-AQ8TGS9 76 aa2.48□□□□□ -2.01
CIT1YNR001C URA2P07259 2214 aaKnown RBP2.48□□□□□ -2.01
CIT1YNR001C COX8P04039 78 aa2.47□□□□□ -2.01
CIT1YNR001C YOR072WQ08486 104 aa2.47□□□□□ -2.01
CIT1YNR001C RTC6O14464 93 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms