RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W VAM10Q08474 114 aa2.39□□□□□ -2.03
PUB1YNL016W YCR095W-AQ3E787 52 aa2.39□□□□□ -2.03
PUB1YNL016W YOR011W-AQ3E807 68 aa2.39□□□□□ -2.03
PUB1YNL016W RPA12P32529 125 aaKnown RBP2.38□□□□□ -2.03
PUB1YNL016W COA4Q05809 96 aa2.38□□□□□ -2.03
PUB1YNL016W POC4Q12245 148 aaPredicted RBP2.38□□□□□ -2.03
PUB1YNL016W YNL146C-AQ3E7Z1 64 aa2.38□□□□□ -2.03
PUB1YNL016W YCR001WP25347 104 aa2.37□□□□□ -2.03
PUB1YNL016W ICS3P47034 131 aa2.37□□□□□ -2.03
PUB1YNL016W RPS22BQ3E7Y3 130 aaKnown RBP2.37□□□□□ -2.03
PUB1YNL016W YHR213W-AQ8TGT4 77 aa2.37□□□□□ -2.03
PUB1YNL016W YBL071CP38185 102 aa2.36□□□□□ -2.03
PUB1YNL016W YGR025WP53216 100 aa2.36□□□□□ -2.03
PUB1YNL016W LCL2Q08045 131 aa2.36□□□□□ -2.03
PUB1YNL016W YGL258W-AQ3E740 77 aa2.36□□□□□ -2.03
PUB1YNL016W YMR175W-AQ3E766 64 aa2.36□□□□□ -2.03
PUB1YNL016W SNA2P56508 79 aa2.36□□□□□ -2.03
PUB1YNL016W YHR086W-AQ3E746 53 aa2.36□□□□□ -2.03
PUB1YNL016W NHP2P32495 156 aaPredicted RBP2.35□□□□□ -2.03
PUB1YNL016W RPS11AP0CX47 156 aaKnown RBP2.34□□□□□ -2.04
PUB1YNL016W RPS11BP0CX48 156 aaKnown RBP2.34□□□□□ -2.04
PUB1YNL016W MRP17P28778 131 aa2.34□□□□□ -2.04
PUB1YNL016W SPC1P46965 94 aa2.34□□□□□ -2.04
PUB1YNL016W CCW12Q12127 133 aa2.33□□□□□ -2.04
PUB1YNL016W PAI3P01094 68 aa2.32□□□□□ -2.04
PUB1YNL016W PAU6P0CE90 120 aa2.32□□□□□ -2.04
PUB1YNL016W PAU18P0CE91 120 aa2.32□□□□□ -2.04
PUB1YNL016W IRC21Q04772 201 aa2.32□□□□□ -2.04
PUB1YNL016W TOM6P33448 61 aa2.31□□□□□ -2.04
PUB1YNL016W YGL041C-BQ3E750 60 aa2.31□□□□□ -2.04
PUB1YNL016W FPR2P32472 135 aa2.29□□□□□ -2.04
PUB1YNL016W YBR013CP38215 129 aa2.29□□□□□ -2.04
PUB1YNL016W MIC27P50945 234 aa2.29□□□□□ -2.04
PUB1YNL016W YPR145C-AQ2V2P0 78 aa2.29□□□□□ -2.04
PUB1YNL016W TOM7P53507 60 aa2.28□□□□□ -2.04
PUB1YNL016W MRPS12P53732 153 aa2.27□□□□□ -2.05
PUB1YNL016W YPL038W-AQ3E7B4 63 aa2.27□□□□□ -2.05
PUB1YNL016W YDR119W-AQ2V2P9 66 aa2.26□□□□□ -2.05
PUB1YNL016W YDR381C-AQ3E6R5 114 aa2.26□□□□□ -2.05
PUB1YNL016W YGR240C-AQ3E786 66 aa2.26□□□□□ -2.05
PUB1YNL016W YLL066W-BQ8TGJ7 56 aa2.26□□□□□ -2.05
PUB1YNL016W COA2Q3E823 68 aa2.25□□□□□ -2.05
PUB1YNL016W ATX1P38636 73 aa2.24□□□□□ -2.05
PUB1YNL016W MRX7P53869 86 aa2.24□□□□□ -2.05
PUB1YNL016W YDR034C-AP0C289 58 aa2.23□□□□□ -2.05
PUB1YNL016W AQY2P0CD90 149 aa2.23□□□□□ -2.05
PUB1YNL016W PAU1P0CE88 120 aa2.23□□□□□ -2.05
PUB1YNL016W PAU14P0CE89 120 aa2.23□□□□□ -2.05
PUB1YNL016W PAU8P0CE92 120 aa2.23□□□□□ -2.05
PUB1YNL016W PAU11P0CE93 120 aa2.23□□□□□ -2.05
PUB1YNL016W PAU13P38725 120 aa2.23□□□□□ -2.05
PUB1YNL016W PAU4P53427 120 aa2.23□□□□□ -2.05
PUB1YNL016W PAU10Q03050 120 aa2.23□□□□□ -2.05
PUB1YNL016W PAU9Q3E770 120 aa2.23□□□□□ -2.05
PUB1YNL016W YNR034W-AQ3E841 98 aa2.23□□□□□ -2.05
PUB1YNL016W YBR292CP38357 123 aa2.23□□□□□ -2.05
PUB1YNL016W SWM2P40342 146 aa2.23□□□□□ -2.05
PUB1YNL016W YJL009WP47078 108 aa2.23□□□□□ -2.05
PUB1YNL016W YDR210WQ03482 75 aa2.23□□□□□ -2.05
PUB1YNL016W SPI1P40092 148 aa2.22□□□□□ -2.05
PUB1YNL016W YNL122CP53921 115 aaPredicted RBP2.22□□□□□ -2.05
PUB1YNL016W AIM19P40502 157 aa2.21□□□□□ -2.06
PUB1YNL016W BSC4P53841 131 aa2.21□□□□□ -2.06
PUB1YNL016W PAU20Q08322 120 aa2.21□□□□□ -2.06
PUB1YNL016W MRPL31P14063 131 aaPredicted RBP2.2□□□□□ -2.06
PUB1YNL016W YMR007WQ03675 126 aa2.2□□□□□ -2.06
PUB1YNL016W YOR105WQ08504 108 aa2.2□□□□□ -2.06
PUB1YNL016W SSS1P35179 80 aa2.19□□□□□ -2.06
PUB1YNL016W PAU23Q07987 124 aa2.19□□□□□ -2.06
PUB1YNL016W PAU17Q12370 124 aa2.19□□□□□ -2.06
PUB1YNL016W YDR010CQ12426 110 aa2.19□□□□□ -2.06
PUB1YNL016W YLR307C-AQ3E825 87 aa2.19□□□□□ -2.06
PUB1YNL016W YER188C-AP0C0V2 99 aa2.18□□□□□ -2.06
PUB1YNL016W LCL1Q02786 101 aa2.18□□□□□ -2.06
PUB1YNL016W YOR314WQ12506 109 aa2.18□□□□□ -2.06
PUB1YNL016W YLR146W-AQ2V2P1 62 aa2.18□□□□□ -2.06
PUB1YNL016W YLR255CO13574 117 aa2.17□□□□□ -2.06
PUB1YNL016W YMR141CP40211 102 aa2.17□□□□□ -2.06
PUB1YNL016W HUA1P40325 198 aa2.17□□□□□ -2.06
PUB1YNL016W YOR072WQ08486 104 aa2.17□□□□□ -2.06
PUB1YNL016W YBR200W-AQ3E755 54 aa2.17□□□□□ -2.06
PUB1YNL016W YOL013W-AP0C272 63 aaPredicted RBP2.16□□□□□ -2.06
PUB1YNL016W MVB12P42939 101 aa2.16□□□□□ -2.06
PUB1YNL016W YKL065W-AQ2V2P2 73 aa2.16□□□□□ -2.06
PUB1YNL016W YPR010C-AA5Z2X5 72 aa2.15□□□□□ -2.07
PUB1YNL016W QCR9P22289 66 aa2.15□□□□□ -2.07
PUB1YNL016W YAR064WP39563 99 aa2.15□□□□□ -2.07
PUB1YNL016W ERI1P62651 68 aaKnown RBP2.15□□□□□ -2.07
PUB1YNL016W YFL041W-AQ3E817 63 aa2.15□□□□□ -2.07
PUB1YNL016W MGR2Q02889 113 aa2.13□□□□□ -2.07
PUB1YNL016W YLR342W-AQ3E810 57 aa2.13□□□□□ -2.07
PUB1YNL016W YHR173CP38864 112 aa2.12□□□□□ -2.07
PUB1YNL016W YIL156W-BQ2V2P4 73 aa2.12□□□□□ -2.07
PUB1YNL016W YGR121W-AQ3E816 71 aa2.12□□□□□ -2.07
PUB1YNL016W YMR122W-AQ3E842 84 aa2.12□□□□□ -2.07
PUB1YNL016W NOP10Q6Q547 58 aaPredicted RBP2.12□□□□□ -2.07
PUB1YNL016W YAL065CO13511 128 aa2.11□□□□□ -2.07
PUB1YNL016W SHU1P38751 150 aa2.1□□□□□ -2.07
PUB1YNL016W PMP3P87284 55 aa2.1□□□□□ -2.07
PUB1YNL016W YNL198CP40166 100 aa2.1□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms