RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W YRA2P36036 203 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
ECM16YMR128W YOL014WQ08110 124 aa2.67□□□□□ -1.98
ECM16YMR128W RRT15Q3E811 62 aa2.67□□□□□ -1.98
ECM16YMR128W TOR1P35169 2470 aa2.67□□□□□ -1.98
ECM16YMR128W ERI1P62651 68 aaKnown RBP2.67□□□□□ -1.98
ECM16YMR128W ICY1Q04329 127 aa2.67□□□□□ -1.98
ECM16YMR128W YNL162W-AQ3E7A8 72 aa2.67□□□□□ -1.98
ECM16YMR128W TDA8Q6B2U8 126 aa2.67□□□□□ -1.98
ECM16YMR128W SMD1Q02260 146 aaPredicted RBP2.66□□□□□ -1.98
ECM16YMR128W ATP20Q12233 115 aa2.66□□□□□ -1.98
ECM16YMR128W RSM18P40033 138 aa2.66□□□□□ -1.98
ECM16YMR128W YER078W-AQ3E7A2 54 aa2.66□□□□□ -1.98
ECM16YMR128W NOP10Q6Q547 58 aaPredicted RBP2.66□□□□□ -1.98
ECM16YMR128W YGL034CP53186 121 aa2.65□□□□□ -1.98
ECM16YMR128W YAL064WP39711 94 aa2.65□□□□□ -1.99
ECM16YMR128W IGD1P43598 195 aa2.65□□□□□ -1.99
ECM16YMR128W MVB12P42939 101 aa2.65□□□□□ -1.99
ECM16YMR128W RPB9P27999 122 aa2.64□□□□□ -1.99
ECM16YMR128W RPL29P05747 59 aaPredicted RBP2.63□□□□□ -1.99
ECM16YMR128W AIM4P38305 123 aaPredicted RBP2.63□□□□□ -1.99
ECM16YMR128W ICS3P47034 131 aa2.63□□□□□ -1.99
ECM16YMR128W YFL019CP43576 117 aa2.63□□□□□ -1.99
ECM16YMR128W HHF1P02309 103 aaKnown RBP2.62□□□□□ -1.99
ECM16YMR128W YGR240C-AQ3E786 66 aa2.62□□□□□ -1.99
ECM16YMR128W YMR230W-AQ3E7B5 62 aa2.62□□□□□ -1.99
ECM16YMR128W MIC10Q96VH5 97 aa2.62□□□□□ -1.99
ECM16YMR128W YDR115WQ04598 105 aa2.62□□□□□ -1.99
ECM16YMR128W YOR268CQ08734 132 aa2.62□□□□□ -1.99
ECM16YMR128W BET1P22804 142 aa2.62□□□□□ -1.99
ECM16YMR128W SPT4P32914 102 aaPredicted RBP2.62□□□□□ -1.99
ECM16YMR128W RPC10P40422 70 aa2.62□□□□□ -1.99
ECM16YMR128W RSM19P53733 91 aaPredicted RBP2.62□□□□□ -1.99
ECM16YMR128W YDR274CP87283 123 aa2.62□□□□□ -1.99
ECM16YMR128W RDS3Q06835 107 aaPredicted RBP2.62□□□□□ -1.99
ECM16YMR128W YOL166W-AQ8TGJ1 51 aa2.62□□□□□ -1.99
ECM16YMR128W CUP1-1P0CX80 61 aa2.61□□□□□ -1.99
ECM16YMR128W CUP1-2P0CX81 61 aa2.61□□□□□ -1.99
ECM16YMR128W YOR376W-AQ3E805 51 aa2.61□□□□□ -1.99
ECM16YMR128W AQY2P0CD90 149 aa2.61□□□□□ -1.99
ECM16YMR128W TDA2P40045 126 aa2.61□□□□□ -1.99
ECM16YMR128W YGL193CP53097 103 aa2.61□□□□□ -1.99
ECM16YMR128W YEL045CP32616 141 aa2.61□□□□□ -1.99
ECM16YMR128W YBR230W-AQ3E762 66 aa2.61□□□□□ -1.99
ECM16YMR128W RPL33AP05744 107 aaKnown RBP2.6□□□□□ -1.99
ECM16YMR128W RPL33BP41056 107 aaKnown RBP2.6□□□□□ -1.99
ECM16YMR128W YLL066W-BQ8TGJ7 56 aa2.6□□□□□ -1.99
ECM16YMR128W FYV5P25585 152 aa2.6□□□□□ -1.99
ECM16YMR128W YJL127C-BQ3E828 52 aa2.6□□□□□ -1.99
ECM16YMR128W YHR213W-BQ8TGK1 99 aa2.6□□□□□ -1.99
ECM16YMR128W YDL241WQ07738 123 aa2.59□□□□□ -1.99
ECM16YMR128W YLR307C-AQ3E825 87 aa2.59□□□□□ -1.99
ECM16YMR128W YLR162WQ06235 118 aa2.58□□□□□ -2
ECM16YMR128W TSC3Q3E790 80 aa2.58□□□□□ -2
ECM16YMR128W YBL039W-BP0C268 59 aa2.58□□□□□ -2
ECM16YMR128W YOR314WQ12506 109 aa2.58□□□□□ -2
ECM16YMR128W YGR121W-AQ3E816 71 aa2.58□□□□□ -2
ECM16YMR128W RPL26AP05743 127 aaKnown RBP2.57□□□□□ -2
ECM16YMR128W COX23P38824 151 aa2.57□□□□□ -2
ECM16YMR128W YJR085CP47131 105 aaKnown RBP2.57□□□□□ -2
ECM16YMR128W RPL26BP53221 127 aaKnown RBP2.57□□□□□ -2
ECM16YMR128W RPL43AP0CX25 92 aaKnown RBP2.57□□□□□ -2
ECM16YMR128W RPL43BP0CX26 92 aa2.57□□□□□ -2
ECM16YMR128W YJL133C-AQ3E7A3 74 aa2.57□□□□□ -2
ECM16YMR128W DYN1P36022 4092 aa2.57□□□□□ -2
ECM16YMR128W YPR010C-AA5Z2X5 72 aa2.56□□□□□ -2
ECM16YMR128W YHL005CP38752 130 aa2.56□□□□□ -2
ECM16YMR128W EDC2P40023 145 aaPredicted RBP2.56□□□□□ -2
ECM16YMR128W RPS30AP0CX33 63 aaKnown RBP2.56□□□□□ -2
ECM16YMR128W RPS30BP0CX34 63 aaKnown RBP2.56□□□□□ -2
ECM16YMR128W GIS2P53849 153 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
ECM16YMR128W SGF11Q03067 99 aa2.55□□□□□ -2
ECM16YMR128W YHR007C-AQ07074 71 aa2.55□□□□□ -2
ECM16YMR128W SPC1P46965 94 aa2.55□□□□□ -2
ECM16YMR128W RPL36BO14455 100 aaKnown RBP2.54□□□□□ -2
ECM16YMR128W RPL36AP05745 100 aaPredicted RBP2.54□□□□□ -2
ECM16YMR128W YIL102CP40488 101 aa2.54□□□□□ -2
ECM16YMR128W LIP1Q03579 150 aa2.54□□□□□ -2
ECM16YMR128W BSC4P53841 131 aa2.54□□□□□ -2
ECM16YMR128W ECM19Q06011 112 aa2.54□□□□□ -2
ECM16YMR128W YNL042W-BQ3E7Z2 85 aa2.54□□□□□ -2
ECM16YMR128W YML100W-AQ8TGT0 57 aa2.54□□□□□ -2
ECM16YMR128W YAR023CD6VPM8 179 aa2.54□□□□□ -2
ECM16YMR128W YGR035W-AQ45U48 73 aa2.54□□□□□ -2
ECM16YMR128W SNA2P56508 79 aa2.53□□□□□ -2
ECM16YMR128W Q0032Q9ZZX7 96 aa2.53□□□□□ -2
ECM16YMR128W YDR010CQ12426 110 aa2.53□□□□□ -2
ECM16YMR128W YDR182W-AQ3E796 67 aa2.53□□□□□ -2
ECM16YMR128W YOR381W-AQ3E804 55 aa2.53□□□□□ -2
ECM16YMR128W YOL013W-AP0C272 63 aaPredicted RBP2.5□□□□□ -2.01
ECM16YMR128W YMR122CQ03879 124 aa2.5□□□□□ -2.01
ECM16YMR128W RTC6O14464 93 aa2.5□□□□□ -2.01
ECM16YMR128W YJL197C-AP0C5P0 93 aa2.5□□□□□ -2.01
ECM16YMR128W AUA1P32450 94 aa2.5□□□□□ -2.01
ECM16YMR128W DDR2P89113 61 aa2.5□□□□□ -2.01
ECM16YMR128W YOR072WQ08486 104 aa2.5□□□□□ -2.01
ECM16YMR128W YAR064WP39563 99 aa2.47□□□□□ -2.01
ECM16YMR128W YER188C-AP0C0V2 99 aa2.47□□□□□ -2.01
ECM16YMR128W YPR153WQ06537 140 aa2.47□□□□□ -2.01
ECM16YMR128W YPR195CQ06594 109 aa2.47□□□□□ -2.01
ECM16YMR128W YBR027CP38220 110 aa2.46□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 75.5 ms