RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C RPL26AP05743 127 aaKnown RBP2.6□□□□□ -1.99
CCS1YMR038C YHL018WP38744 120 aaPredicted RBP2.6□□□□□ -1.99
CCS1YMR038C RPL26BP53221 127 aaKnown RBP2.6□□□□□ -1.99
CCS1YMR038C YPR170W-BP0C5R9 85 aa2.59□□□□□ -1.99
CCS1YMR038C IRC21Q04772 201 aa2.59□□□□□ -1.99
CCS1YMR038C YIR021W-AQ3E739 70 aa2.59□□□□□ -1.99
CCS1YMR038C ICY1Q04329 127 aa2.58□□□□□ -2
CCS1YMR038C PAU17Q12370 124 aa2.58□□□□□ -2
CCS1YMR038C COA6Q3E846 104 aa2.58□□□□□ -2
CCS1YMR038C IGO2Q9P305 131 aa2.58□□□□□ -2
CCS1YMR038C FYV5P25585 152 aa2.57□□□□□ -2
CCS1YMR038C YIA6P40556 373 aa2.57□□□□□ -2
CCS1YMR038C CNL1Q06333 122 aa2.57□□□□□ -2
CCS1YMR038C YOR072WQ08486 104 aa2.57□□□□□ -2
CCS1YMR038C NAT5Q08689 176 aa2.57□□□□□ -2
CCS1YMR038C YLR050CQ12155 161 aaKnown RBP2.57□□□□□ -2
CCS1YMR038C YOR034C-AQ3E735 80 aa2.57□□□□□ -2
CCS1YMR038C ELC1Q03071 99 aa2.56□□□□□ -2
CCS1YMR038C RPS28BP0C0X0 67 aaKnown RBP2.55□□□□□ -2
CCS1YMR038C SEC11P15367 167 aa2.55□□□□□ -2
CCS1YMR038C RGM1Q00453 211 aa2.55□□□□□ -2
CCS1YMR038C RPS28AQ3E7X9 67 aaPredicted RBP2.55□□□□□ -2
CCS1YMR038C ISD11Q6Q560 94 aa2.55□□□□□ -2
CCS1YMR038C YLR236CA0A023PZG4 107 aa2.54□□□□□ -2
CCS1YMR038C YKL044WP36092 106 aa2.54□□□□□ -2
CCS1YMR038C YHL005CP38752 130 aa2.54□□□□□ -2
CCS1YMR038C YHR130CP38834 111 aa2.54□□□□□ -2
CCS1YMR038C PAI3P01094 68 aa2.53□□□□□ -2
CCS1YMR038C YBR121C-AP0C5L4 52 aa2.53□□□□□ -2
CCS1YMR038C BET1P22804 142 aa2.53□□□□□ -2
CCS1YMR038C PAU23Q07987 124 aa2.53□□□□□ -2
CCS1YMR038C YHR139C-AO13536 103 aa2.52□□□□□ -2.01
CCS1YMR038C RPL36BO14455 100 aaKnown RBP2.52□□□□□ -2.01
CCS1YMR038C INO4P13902 151 aa2.52□□□□□ -2.01
CCS1YMR038C YNL122CP53921 115 aaPredicted RBP2.52□□□□□ -2.01
CCS1YMR038C COX7P10174 60 aa2.51□□□□□ -2.01
CCS1YMR038C MSL1P40567 111 aaPredicted RBP2.51□□□□□ -2.01
CCS1YMR038C YGL230CP53074 147 aa2.51□□□□□ -2.01
CCS1YMR038C YNL198CP40166 100 aa2.5□□□□□ -2.01
CCS1YMR038C YFL065CP43539 102 aa2.5□□□□□ -2.01
CCS1YMR038C YPR203WQ08994 102 aa2.5□□□□□ -2.01
CCS1YMR038C YDL157CQ12082 118 aa2.5□□□□□ -2.01
CCS1YMR038C MPC3P53311 146 aa2.49□□□□□ -2.01
CCS1YMR038C YKL183C-AQ3E765 70 aa2.49□□□□□ -2.01
CCS1YMR038C MSA2P36157 363 aa2.47□□□□□ -2.01
CCS1YMR038C RSM18P40033 138 aa2.47□□□□□ -2.01
CCS1YMR038C YGR039WP53225 103 aa2.45□□□□□ -2.02
CCS1YMR038C ATX1P38636 73 aa2.44□□□□□ -2.02
CCS1YMR038C DSE2P38844 325 aa2.44□□□□□ -2.02
CCS1YMR038C SFT1P43682 97 aa2.44□□□□□ -2.02
CCS1YMR038C YLR157W-DP0CE99 70 aa2.43□□□□□ -2.02
CCS1YMR038C OST2P46964 130 aa2.43□□□□□ -2.02
CCS1YMR038C YLR363W-AQ3E747 85 aa2.43□□□□□ -2.02
CCS1YMR038C FYV12Q08559 129 aa2.42□□□□□ -2.02
CCS1YMR038C YIL102C-AQ2V2P5 75 aa2.42□□□□□ -2.02
CCS1YMR038C YOL097W-AQ3E7Y9 61 aa2.42□□□□□ -2.02
CCS1YMR038C TDA8Q6B2U8 126 aa2.42□□□□□ -2.02
CCS1YMR038C YCR085WP25650 117 aa2.41□□□□□ -2.02
CCS1YMR038C HUR1P45820 110 aa2.41□□□□□ -2.02
CCS1YMR038C SBH1P52870 82 aa2.41□□□□□ -2.02
CCS1YMR038C COF1Q03048 143 aaKnown RBP2.4□□□□□ -2.03
CCS1YMR038C YDR119W-AQ2V2P9 66 aa2.4□□□□□ -2.03
CCS1YMR038C Q0017Q9ZZX8 53 aa2.4□□□□□ -2.03
CCS1YMR038C NHP2P32495 156 aaPredicted RBP2.39□□□□□ -2.03
CCS1YMR038C RPS29AP41057 56 aaKnown RBP2.39□□□□□ -2.03
CCS1YMR038C RAD6P06104 172 aa2.38□□□□□ -2.03
CCS1YMR038C YER181CP40097 107 aa2.38□□□□□ -2.03
CCS1YMR038C RSM19P53733 91 aaPredicted RBP2.38□□□□□ -2.03
CCS1YMR038C YCR050CP25630 102 aa2.37□□□□□ -2.03
CCS1YMR038C YLR296WQ05898 108 aa2.37□□□□□ -2.03
CCS1YMR038C YLR162WQ06235 118 aa2.37□□□□□ -2.03
CCS1YMR038C YHR213W-BQ8TGK1 99 aa2.37□□□□□ -2.03
CCS1YMR038C MIC10Q96VH5 97 aa2.37□□□□□ -2.03
CCS1YMR038C RPA12P32529 125 aaKnown RBP2.36□□□□□ -2.03
CCS1YMR038C LSM6Q06406 86 aaKnown RBP2.36□□□□□ -2.03
CCS1YMR038C YLR412C-AQ3E742 68 aa2.36□□□□□ -2.03
CCS1YMR038C TSC3Q3E790 80 aa2.36□□□□□ -2.03
CCS1YMR038C YFL041W-AQ3E817 63 aa2.36□□□□□ -2.03
CCS1YMR038C YFR009W-AP0C5M9 85 aa2.35□□□□□ -2.03
CCS1YMR038C YJR107C-AP0CT86 78 aa2.35□□□□□ -2.03
CCS1YMR038C YJL133C-AQ3E7A3 74 aa2.35□□□□□ -2.03
CCS1YMR038C YNL277W-AQ3E7Z0 62 aa2.35□□□□□ -2.03
CCS1YMR038C PBI2P0CT04 75 aaKnown RBP2.34□□□□□ -2.03
CCS1YMR038C RPS29BP41058 56 aaKnown RBP2.34□□□□□ -2.03
CCS1YMR038C YGR164WP53291 111 aa2.34□□□□□ -2.03
CCS1YMR038C YER187WP40102 141 aa2.33□□□□□ -2.04
CCS1YMR038C ICS3P47034 131 aa2.33□□□□□ -2.04
CCS1YMR038C YJR128WP47162 119 aa2.33□□□□□ -2.04
CCS1YMR038C ATP18P81450 59 aa2.33□□□□□ -2.04
CCS1YMR038C TOM6P33448 61 aa2.32□□□□□ -2.04
CCS1YMR038C YDR210WQ03482 75 aa2.31□□□□□ -2.04
CCS1YMR038C YHL042WP38729 150 aa2.3□□□□□ -2.04
CCS1YMR038C YJL009WP47078 108 aa2.3□□□□□ -2.04
CCS1YMR038C YGL034CP53186 121 aa2.3□□□□□ -2.04
CCS1YMR038C SHH4Q06236 168 aa2.3□□□□□ -2.04
CCS1YMR038C YPL038W-AQ3E7B4 63 aa2.3□□□□□ -2.04
CCS1YMR038C SKI6P46948 246 aaPredicted RBP2.29□□□□□ -2.04
CCS1YMR038C EDC1P53080 175 aaPredicted RBP2.29□□□□□ -2.04
CCS1YMR038C YOL014WQ08110 124 aa2.29□□□□□ -2.04
CCS1YMR038C YHR073W-AP0C5N7 58 aa2.28□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 119.1 ms