RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C IRA1P18963 3092 aa2.29□□□□□ -2.04
VPS33YLR396C YHL037CP38733 133 aa2.29□□□□□ -2.04
VPS33YLR396C CCW12Q12127 133 aa2.29□□□□□ -2.04
VPS33YLR396C YOR314WQ12506 109 aa2.29□□□□□ -2.04
VPS33YLR396C YOR020W-AQ3E824 90 aa2.29□□□□□ -2.04
VPS33YLR396C YOL166W-AQ8TGJ1 51 aa2.29□□□□□ -2.04
VPS33YLR396C RPL36BO14455 100 aaKnown RBP2.29□□□□□ -2.04
VPS33YLR396C RPL36AP05745 100 aaPredicted RBP2.29□□□□□ -2.04
VPS33YLR396C YFR009W-AP0C5M9 85 aa2.29□□□□□ -2.04
VPS33YLR396C YOR376W-AQ3E805 51 aa2.29□□□□□ -2.04
VPS33YLR396C YLL006W-AQ3E814 58 aa2.29□□□□□ -2.04
VPS33YLR396C YHL005CP38752 130 aa2.28□□□□□ -2.04
VPS33YLR396C YGL034CP53186 121 aa2.28□□□□□ -2.04
VPS33YLR396C YDR182W-AQ3E796 67 aa2.28□□□□□ -2.04
VPS33YLR396C YBR219CP38317 127 aa2.27□□□□□ -2.05
VPS33YLR396C SED1Q01589 338 aa2.27□□□□□ -2.05
VPS33YLR396C YGR035W-AQ45U48 73 aa2.27□□□□□ -2.05
VPS33YLR396C TDA2P40045 126 aa2.27□□□□□ -2.05
VPS33YLR396C YIR020CP40575 100 aa2.27□□□□□ -2.05
VPS33YLR396C YMR122CQ03879 124 aa2.27□□□□□ -2.05
VPS33YLR396C YOR011W-AQ3E807 68 aa2.27□□□□□ -2.05
VPS33YLR396C RPS30AP0CX33 63 aaKnown RBP2.26□□□□□ -2.05
VPS33YLR396C RPS30BP0CX34 63 aaKnown RBP2.26□□□□□ -2.05
VPS33YLR396C VAM10Q08474 114 aa2.26□□□□□ -2.05
VPS33YLR396C YPR013CQ12145 317 aa2.26□□□□□ -2.05
VPS33YLR396C YCL048W-AQ2V2Q2 79 aa2.26□□□□□ -2.05
VPS33YLR396C YER135CP40082 130 aa2.26□□□□□ -2.05
VPS33YLR396C YOL014WQ08110 124 aa2.26□□□□□ -2.05
VPS33YLR396C YNL146C-AQ3E7Z1 64 aa2.26□□□□□ -2.05
VPS33YLR396C YKL065W-AQ2V2P2 73 aa2.25□□□□□ -2.05
VPS33YLR396C YER188C-AP0C0V2 99 aa2.24□□□□□ -2.05
VPS33YLR396C OST5Q92316 86 aa2.24□□□□□ -2.05
VPS33YLR396C TOS8P53147 276 aa2.24□□□□□ -2.05
VPS33YLR396C YPR153WQ06537 140 aa2.24□□□□□ -2.05
VPS33YLR396C YMR122W-AQ3E842 84 aa2.24□□□□□ -2.05
VPS33YLR396C PMP3P87284 55 aa2.23□□□□□ -2.05
VPS33YLR396C TSC3Q3E790 80 aa2.23□□□□□ -2.05
VPS33YLR396C URA2P07259 2214 aaKnown RBP2.23□□□□□ -2.05
VPS33YLR396C LIP1Q03579 150 aa2.22□□□□□ -2.05
VPS33YLR396C YML100W-AQ8TGT0 57 aa2.22□□□□□ -2.05
VPS33YLR396C MRPS8Q03799 155 aa2.22□□□□□ -2.05
VPS33YLR396C YPR010C-AA5Z2X5 72 aa2.21□□□□□ -2.06
VPS33YLR396C COX23P38824 151 aa2.21□□□□□ -2.06
VPS33YLR396C YIL102CP40488 101 aa2.21□□□□□ -2.06
VPS33YLR396C FMP27Q06179 2628 aa2.21□□□□□ -2.06
VPS33YLR396C RPL29P05747 59 aaPredicted RBP2.21□□□□□ -2.06
VPS33YLR396C GCN1P33892 2672 aaKnown RBP2.2□□□□□ -2.06
VPS33YLR396C YJL144WP47009 104 aa2.2□□□□□ -2.06
VPS33YLR396C RPS11AP0CX47 156 aaKnown RBP2.19□□□□□ -2.06
VPS33YLR396C RPS11BP0CX48 156 aaKnown RBP2.19□□□□□ -2.06
VPS33YLR396C MVB12P42939 101 aa2.19□□□□□ -2.06
VPS33YLR396C YDR010CQ12426 110 aa2.19□□□□□ -2.06
VPS33YLR396C YHR213W-BQ8TGK1 99 aa2.19□□□□□ -2.06
VPS33YLR396C TRA1P38811 3744 aa2.19□□□□□ -2.06
VPS33YLR396C YAL064WP39711 94 aa2.19□□□□□ -2.06
VPS33YLR396C SPC1P46965 94 aa2.18□□□□□ -2.06
VPS33YLR396C TAR1Q8TGM6 124 aa2.18□□□□□ -2.06
VPS33YLR396C FYV5P25585 152 aa2.18□□□□□ -2.06
VPS33YLR396C YGL193CP53097 103 aa2.18□□□□□ -2.06
VPS33YLR396C YIL156W-BQ2V2P4 73 aa2.18□□□□□ -2.06
VPS33YLR396C YJL133C-AQ3E7A3 74 aa2.18□□□□□ -2.06
VPS33YLR396C YOL013W-AP0C272 63 aaPredicted RBP2.17□□□□□ -2.06
VPS33YLR396C YBR230W-AQ3E762 66 aa2.17□□□□□ -2.06
VPS33YLR396C YAR023CD6VPM8 179 aa2.16□□□□□ -2.06
VPS33YLR396C YCR095W-AQ3E787 52 aa2.16□□□□□ -2.06
VPS33YLR396C YJL127C-BQ3E828 52 aa2.16□□□□□ -2.06
VPS33YLR396C YLR157W-DP0CE99 70 aa2.16□□□□□ -2.06
VPS33YLR396C HOR7Q05827 59 aa2.16□□□□□ -2.06
VPS33YLR396C YDL241WQ07738 123 aa2.16□□□□□ -2.06
VPS33YLR396C AQY2P0CD90 149 aa2.15□□□□□ -2.07
VPS33YLR396C YNL042W-BQ3E7Z2 85 aa2.15□□□□□ -2.07
VPS33YLR396C HUB1Q6Q546 73 aa2.15□□□□□ -2.07
VPS33YLR396C YBL039W-BP0C268 59 aa2.14□□□□□ -2.07
VPS33YLR396C DDR48P18899 430 aaKnown RBP2.14□□□□□ -2.07
VPS33YLR396C SPG1P50088 95 aa2.14□□□□□ -2.07
VPS33YLR396C SDH6Q3E785 79 aa2.14□□□□□ -2.07
VPS33YLR396C YMR001C-AQ8TGS9 76 aa2.14□□□□□ -2.07
VPS33YLR396C YPR117WQ06116 2489 aa2.13□□□□□ -2.07
VPS33YLR396C YHR125WP38831 101 aa2.13□□□□□ -2.07
VPS33YLR396C YDR034W-BQ6Q5X2 51 aa2.13□□□□□ -2.07
VPS33YLR396C RPC10P40422 70 aa2.13□□□□□ -2.07
VPS33YLR396C YLR307C-AQ3E825 87 aa2.13□□□□□ -2.07
VPS33YLR396C AUA1P32450 94 aa2.12□□□□□ -2.07
VPS33YLR396C YCR001WP25347 104 aa2.11□□□□□ -2.07
VPS33YLR396C RDS3Q06835 107 aaPredicted RBP2.11□□□□□ -2.07
VPS33YLR396C YBR027CP38220 110 aa2.11□□□□□ -2.07
VPS33YLR396C YAR064WP39563 99 aa2.11□□□□□ -2.07
VPS33YLR396C YGL149WP53116 101 aa2.11□□□□□ -2.07
VPS33YLR396C YGR240C-AQ3E786 66 aa2.11□□□□□ -2.07
VPS33YLR396C LCL2Q08045 131 aa2.1□□□□□ -2.07
VPS33YLR396C BSC4P53841 131 aa2.1□□□□□ -2.07
VPS33YLR396C MRX7P53869 86 aa2.1□□□□□ -2.07
VPS33YLR396C ATP17Q06405 101 aa2.1□□□□□ -2.07
VPS33YLR396C YHR007C-AQ07074 71 aa2.1□□□□□ -2.07
VPS33YLR396C YNL122CP53921 115 aaPredicted RBP2.09□□□□□ -2.07
VPS33YLR396C DDR2P89113 61 aa2.09□□□□□ -2.07
VPS33YLR396C QCR10P37299 77 aa2.08□□□□□ -2.08
VPS33YLR396C UTP20P35194 2493 aaKnown RBP2.08□□□□□ -2.08
VPS33YLR396C PRP8P33334 2413 aaKnown RBP2.08□□□□□ -2.08
VPS33YLR396C YOR072WQ08486 104 aa2.08□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms