RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W YLR156WP0CE96 114 aa2.94□□□□□ -1.94
CBF5YLR175W YLR159WP0CE97 114 aa2.94□□□□□ -1.94
CBF5YLR175W YLR161WP0CE98 114 aa2.94□□□□□ -1.94
CBF5YLR175W YBL112CQ3E7Y4 105 aa2.94□□□□□ -1.94
CBF5YLR175W BET1P22804 142 aa2.93□□□□□ -1.94
CBF5YLR175W DSE2P38844 325 aa2.93□□□□□ -1.94
CBF5YLR175W EDC2P40023 145 aaPredicted RBP2.93□□□□□ -1.94
CBF5YLR175W SPG1P50088 95 aa2.93□□□□□ -1.94
CBF5YLR175W OST2P46964 130 aa2.92□□□□□ -1.94
CBF5YLR175W TSC3Q3E790 80 aa2.92□□□□□ -1.94
CBF5YLR175W RPL36BO14455 100 aaKnown RBP2.91□□□□□ -1.94
CBF5YLR175W RPA12P32529 125 aaKnown RBP2.91□□□□□ -1.94
CBF5YLR175W YJR085CP47131 105 aaKnown RBP2.91□□□□□ -1.94
CBF5YLR175W YOR072WQ08486 104 aa2.91□□□□□ -1.94
CBF5YLR175W YCR085WP25650 117 aa2.9□□□□□ -1.94
CBF5YLR175W YFL067WP43537 175 aa2.9□□□□□ -1.94
CBF5YLR175W BSC4P53841 131 aa2.9□□□□□ -1.94
CBF5YLR175W ATP18P81450 59 aa2.9□□□□□ -1.94
CBF5YLR175W YHR007C-AQ07074 71 aa2.9□□□□□ -1.94
CBF5YLR175W YFR009W-AP0C5M9 85 aa2.9□□□□□ -1.95
CBF5YLR175W RUB1Q03919 77 aa2.9□□□□□ -1.95
CBF5YLR175W PBI2P0CT04 75 aaKnown RBP2.89□□□□□ -1.95
CBF5YLR175W YAR1P46683 200 aa2.89□□□□□ -1.95
CBF5YLR175W RSM19P53733 91 aaPredicted RBP2.89□□□□□ -1.95
CBF5YLR175W YDR381C-AQ3E6R5 114 aa2.89□□□□□ -1.95
CBF5YLR175W TDA8Q6B2U8 126 aa2.89□□□□□ -1.95
CBF5YLR175W YHR139C-AO13536 103 aa2.88□□□□□ -1.95
CBF5YLR175W YPL080CQ02826 108 aa2.88□□□□□ -1.95
CBF5YLR175W YOR268CQ08734 132 aa2.88□□□□□ -1.95
CBF5YLR175W ATX1P38636 73 aa2.87□□□□□ -1.95
CBF5YLR175W KRE1P17260 313 aa2.86□□□□□ -1.95
CBF5YLR175W DDR48P18899 430 aaKnown RBP2.86□□□□□ -1.95
CBF5YLR175W RSM18P40033 138 aa2.86□□□□□ -1.95
CBF5YLR175W YGL149WP53116 101 aa2.86□□□□□ -1.95
CBF5YLR175W YER078W-AQ3E7A2 54 aa2.86□□□□□ -1.95
CBF5YLR175W YMR230W-AQ3E7B5 62 aa2.86□□□□□ -1.95
CBF5YLR175W SKI6P46948 246 aaPredicted RBP2.85□□□□□ -1.95
CBF5YLR175W YNL184CP53876 108 aa2.85□□□□□ -1.95
CBF5YLR175W ISD11Q6Q560 94 aa2.85□□□□□ -1.95
CBF5YLR175W YHR213W-BQ8TGK1 99 aa2.85□□□□□ -1.95
CBF5YLR175W YJL197C-AP0C5P0 93 aa2.84□□□□□ -1.95
CBF5YLR175W YBR027CP38220 110 aa2.84□□□□□ -1.95
CBF5YLR175W ICS3P47034 131 aa2.84□□□□□ -1.95
CBF5YLR175W SHH4Q06236 168 aa2.84□□□□□ -1.95
CBF5YLR175W SLO1Q3E784 85 aa2.84□□□□□ -1.95
CBF5YLR175W COX23P38824 151 aa2.84□□□□□ -1.96
CBF5YLR175W HHF1P02309 103 aaKnown RBP2.83□□□□□ -1.96
CBF5YLR175W INO4P13902 151 aa2.83□□□□□ -1.96
CBF5YLR175W YLR162WQ06235 118 aa2.83□□□□□ -1.96
CBF5YLR175W YJL133C-AQ3E7A3 74 aa2.83□□□□□ -1.96
CBF5YLR175W ECM19Q06011 112 aa2.82□□□□□ -1.96
CBF5YLR175W YAL063C-AQ3E791 96 aa2.82□□□□□ -1.96
CBF5YLR175W YEL045CP32616 141 aa2.81□□□□□ -1.96
CBF5YLR175W TDA2P40045 126 aa2.81□□□□□ -1.96
CBF5YLR175W EDC1P53080 175 aaPredicted RBP2.81□□□□□ -1.96
CBF5YLR175W YDR010CQ12426 110 aa2.81□□□□□ -1.96
CBF5YLR175W MIC10Q96VH5 97 aa2.81□□□□□ -1.96
CBF5YLR175W RAD6P06104 172 aa2.8□□□□□ -1.96
CBF5YLR175W EMC6Q12431 108 aa2.8□□□□□ -1.96
CBF5YLR175W YFL041W-AQ3E817 63 aa2.8□□□□□ -1.96
CBF5YLR175W KSH1Q8TGJ3 72 aa2.8□□□□□ -1.96
CBF5YLR175W YCR050CP25630 102 aa2.79□□□□□ -1.96
CBF5YLR175W RPL38P49167 78 aaKnown RBP2.79□□□□□ -1.96
CBF5YLR175W YOL014WQ08110 124 aa2.79□□□□□ -1.96
CBF5YLR175W YOL097W-AQ3E7Y9 61 aa2.79□□□□□ -1.96
CBF5YLR175W YLR157W-DP0CE99 70 aa2.78□□□□□ -1.96
CBF5YLR175W YHL042WP38729 150 aa2.78□□□□□ -1.96
CBF5YLR175W KTI11Q3E840 82 aa2.78□□□□□ -1.96
CBF5YLR175W ATP20Q12233 115 aa2.77□□□□□ -1.97
CBF5YLR175W YSY6P38374 65 aa2.77□□□□□ -1.97
CBF5YLR175W YFL065CP43539 102 aa2.76□□□□□ -1.97
CBF5YLR175W COF1Q03048 143 aaKnown RBP2.76□□□□□ -1.97
CBF5YLR175W YPR203WQ08994 102 aa2.76□□□□□ -1.97
CBF5YLR175W YLR285C-AQ3E771 56 aa2.76□□□□□ -1.97
CBF5YLR175W YOR304C-AO14468 76 aa2.75□□□□□ -1.97
CBF5YLR175W YHL005CP38752 130 aa2.74□□□□□ -1.97
CBF5YLR175W YHL018WP38744 120 aaPredicted RBP2.73□□□□□ -1.97
CBF5YLR175W YKL183C-AQ3E765 70 aa2.73□□□□□ -1.97
CBF5YLR175W YAR064WP39563 99 aa2.71□□□□□ -1.97
CBF5YLR175W RPL36AP05745 100 aaPredicted RBP2.71□□□□□ -1.98
CBF5YLR175W YHR073W-AP0C5N7 58 aa2.7□□□□□ -1.98
CBF5YLR175W COX7P10174 60 aa2.7□□□□□ -1.98
CBF5YLR175W YBR121C-AP0C5L4 52 aa2.69□□□□□ -1.98
CBF5YLR175W CMC4Q3E7A9 73 aa2.69□□□□□ -1.98
CBF5YLR175W YDL012CQ12489 107 aa2.68□□□□□ -1.98
CBF5YLR175W YDR119W-AQ2V2P9 66 aa2.68□□□□□ -1.98
CBF5YLR175W YPL038W-AQ3E7B4 63 aa2.68□□□□□ -1.98
CBF5YLR175W YOR314WQ12506 109 aa2.67□□□□□ -1.98
CBF5YLR175W YNL122CP53921 115 aaPredicted RBP2.66□□□□□ -1.98
CBF5YLR175W YGR039WP53225 103 aa2.65□□□□□ -1.98
CBF5YLR175W YPR153WQ06537 140 aa2.65□□□□□ -1.99
CBF5YLR175W YOL013W-AP0C272 63 aaPredicted RBP2.64□□□□□ -1.99
CBF5YLR175W YGR164WP53291 111 aa2.64□□□□□ -1.99
CBF5YLR175W NOP10Q6Q547 58 aaPredicted RBP2.64□□□□□ -1.99
CBF5YLR175W RPS28BP0C0X0 67 aaKnown RBP2.63□□□□□ -1.99
CBF5YLR175W YDR246W-AQ3E763 66 aa2.63□□□□□ -1.99
CBF5YLR175W YLR361C-AQ3E795 98 aa2.63□□□□□ -1.99
CBF5YLR175W RPS28AQ3E7X9 67 aaPredicted RBP2.63□□□□□ -1.99
CBF5YLR175W YER187WP40102 141 aa2.62□□□□□ -1.99
CBF5YLR175W LIP1Q03579 150 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 10.1 ms