RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W YIL163CP40448 117 aa1.19□□□□□ -2.22
CFT2YLR115W FAS1P07149 2051 aaKnown RBP1.19□□□□□ -2.22
CFT2YLR115W BSC4P53841 131 aa1.18□□□□□ -2.22
CFT2YLR115W YLR162WQ06235 118 aa1.18□□□□□ -2.22
CFT2YLR115W YKL023C-AQ2V2P3 75 aa1.18□□□□□ -2.22
CFT2YLR115W YGR121W-AQ3E816 71 aa1.18□□□□□ -2.22
CFT2YLR115W URA2P07259 2214 aaKnown RBP1.18□□□□□ -2.22
CFT2YLR115W QCR9P22289 66 aa1.18□□□□□ -2.22
CFT2YLR115W PDX3P38075 228 aaKnown RBP1.18□□□□□ -2.22
CFT2YLR115W YDR210WQ03482 75 aa1.18□□□□□ -2.22
CFT2YLR115W YIL134C-AQ45U18 67 aa1.18□□□□□ -2.22
CFT2YLR115W STT4P37297 1900 aa1.18□□□□□ -2.22
CFT2YLR115W YSF3P0C074 85 aaPredicted RBP1.17□□□□□ -2.22
CFT2YLR115W HMRA2P0CY13 119 aa1.17□□□□□ -2.22
CFT2YLR115W MPC2P38857 129 aa1.17□□□□□ -2.22
CFT2YLR115W TAR1Q8TGM6 124 aa1.17□□□□□ -2.22
CFT2YLR115W YPR145C-AQ2V2P0 78 aa1.17□□□□□ -2.22
CFT2YLR115W YLR285C-AQ3E771 56 aa1.17□□□□□ -2.22
CFT2YLR115W YGR240C-AQ3E786 66 aa1.17□□□□□ -2.22
CFT2YLR115W YBL071CP38185 102 aa1.16□□□□□ -2.22
CFT2YLR115W COX19Q3E731 98 aa1.16□□□□□ -2.22
CFT2YLR115W RPS22BQ3E7Y3 130 aaKnown RBP1.16□□□□□ -2.22
CFT2YLR115W YNL146C-AQ3E7Z1 64 aa1.16□□□□□ -2.22
CFT2YLR115W MRPL31P14063 131 aaPredicted RBP1.16□□□□□ -2.22
CFT2YLR115W YHR173CP38864 112 aa1.16□□□□□ -2.22
CFT2YLR115W YOR072WQ08486 104 aa1.16□□□□□ -2.22
CFT2YLR115W RPS11AP0CX47 156 aaKnown RBP1.15□□□□□ -2.22
CFT2YLR115W RPS11BP0CX48 156 aaKnown RBP1.15□□□□□ -2.22
CFT2YLR115W LCL2Q08045 131 aa1.15□□□□□ -2.22
CFT2YLR115W SPC1P46965 94 aa1.15□□□□□ -2.23
CFT2YLR115W YNL122CP53921 115 aaPredicted RBP1.15□□□□□ -2.23
CFT2YLR115W CCW12Q12127 133 aa1.15□□□□□ -2.23
CFT2YLR115W YGR035W-AQ45U48 73 aa1.15□□□□□ -2.23
CFT2YLR115W AIM4P38305 123 aaPredicted RBP1.14□□□□□ -2.23
CFT2YLR115W YSY6P38374 65 aa1.14□□□□□ -2.23
CFT2YLR115W PAU1P0CE88 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU14P0CE89 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU6P0CE90 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU18P0CE91 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU8P0CE92 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU11P0CE93 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU13P38725 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU4P53427 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU10Q03050 120 aa1.14□□□□□ -2.23
CFT2YLR115W PAU9Q3E770 120 aa1.14□□□□□ -2.23
CFT2YLR115W YDR182W-AQ3E796 67 aa1.14□□□□□ -2.23
CFT2YLR115W YEL008WP40001 126 aa1.13□□□□□ -2.23
CFT2YLR115W YDR246W-AQ3E763 66 aa1.13□□□□□ -2.23
CFT2YLR115W YHR086W-AQ3E746 53 aa1.13□□□□□ -2.23
CFT2YLR115W SLH1P53327 1967 aaKnown RBP1.13□□□□□ -2.23
CFT2YLR115W PAU7P39545 55 aa1.12□□□□□ -2.23
CFT2YLR115W MRPS12P53732 153 aa1.12□□□□□ -2.23
CFT2YLR115W YDR010CQ12426 110 aa1.12□□□□□ -2.23
CFT2YLR115W TIM12P32830 109 aa1.12□□□□□ -2.23
CFT2YLR115W YIL086CP40503 102 aa1.12□□□□□ -2.23
CFT2YLR115W NOP10Q6Q547 58 aaPredicted RBP1.12□□□□□ -2.23
CFT2YLR115W PAU20Q08322 120 aa1.11□□□□□ -2.23
CFT2YLR115W YOL097W-AQ3E7Y9 61 aa1.11□□□□□ -2.23
CFT2YLR115W YLR255CO13574 117 aa1.11□□□□□ -2.23
CFT2YLR115W FPR2P32472 135 aa1.1□□□□□ -2.23
CFT2YLR115W YAR064WP39563 99 aa1.1□□□□□ -2.23
CFT2YLR115W ERI1P62651 68 aaKnown RBP1.1□□□□□ -2.23
CFT2YLR115W YMR007WQ03675 126 aa1.1□□□□□ -2.23
CFT2YLR115W YIL156W-BQ2V2P4 73 aa1.1□□□□□ -2.23
CFT2YLR115W CYR1P08678 2026 aaKnown RBP1.1□□□□□ -2.23
CFT2YLR115W CDC39P25655 2108 aaKnown RBP1.1□□□□□ -2.23
CFT2YLR115W AQY2P0CD90 149 aa1.09□□□□□ -2.23
CFT2YLR115W YCR001WP25347 104 aa1.09□□□□□ -2.23
CFT2YLR115W ATP17Q06405 101 aa1.09□□□□□ -2.23
CFT2YLR115W YNL042W-BQ3E7Z2 85 aa1.09□□□□□ -2.23
CFT2YLR115W HUB1Q6Q546 73 aa1.09□□□□□ -2.24
CFT2YLR115W SHU1P38751 150 aa1.08□□□□□ -2.24
CFT2YLR115W MGR2Q02889 113 aa1.08□□□□□ -2.24
CFT2YLR115W YDL022C-AP0C5L6 82 aa1.07□□□□□ -2.24
CFT2YLR115W YIL102CP40488 101 aa1.07□□□□□ -2.24
CFT2YLR115W YMR122W-AQ3E842 84 aa1.07□□□□□ -2.24
CFT2YLR115W YMR141CP40211 102 aa1.07□□□□□ -2.24
CFT2YLR115W YHR212W-AP0CX91 67 aa1.06□□□□□ -2.24
CFT2YLR115W COX7P10174 60 aa1.06□□□□□ -2.24
CFT2YLR115W ATP18P81450 59 aa1.05□□□□□ -2.24
CFT2YLR115W LCL1Q02786 101 aa1.05□□□□□ -2.24
CFT2YLR115W YJR128WP47162 119 aa1.04□□□□□ -2.24
CFT2YLR115W HUG1Q6Q5K6 68 aa1.04□□□□□ -2.24
CFT2YLR115W YOL166W-AQ8TGJ1 51 aa1.04□□□□□ -2.24
CFT2YLR115W SGF11Q03067 99 aa1.04□□□□□ -2.24
CFT2YLR115W YBR201C-AQ2V2Q3 67 aa1.04□□□□□ -2.24
CFT2YLR115W Q0032Q9ZZX7 96 aa1.04□□□□□ -2.24
CFT2YLR115W RPS30AP0CX33 63 aaKnown RBP1.03□□□□□ -2.24
CFT2YLR115W RPS30BP0CX34 63 aaKnown RBP1.03□□□□□ -2.24
CFT2YLR115W YOR032W-AQ8TGS1 66 aa1.03□□□□□ -2.24
CFT2YLR115W SMX2P40204 77 aaKnown RBP1.02□□□□□ -2.25
CFT2YLR115W BLM10P43583 2143 aa1.02□□□□□ -2.25
CFT2YLR115W SDH6Q3E785 79 aa1.02□□□□□ -2.25
CFT2YLR115W YOL013W-AP0C272 63 aaPredicted RBP1.02□□□□□ -2.25
CFT2YLR115W YBR032WP38223 100 aa1.02□□□□□ -2.25
CFT2YLR115W MVB12P42939 101 aa1.02□□□□□ -2.25
CFT2YLR115W YBR072C-AQ3E794 53 aa1.02□□□□□ -2.25
CFT2YLR115W RPL38P49167 78 aaKnown RBP1.02□□□□□ -2.25
CFT2YLR115W EDC1P53080 175 aaPredicted RBP1.01□□□□□ -2.25
CFT2YLR115W YJR107C-AP0CT86 78 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms