RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W ATP18P81450 59 aa4.62□□□□□ -1.67
GEF1YJR040W RPL26AP05743 127 aaKnown RBP4.62□□□□□ -1.67
GEF1YJR040W RPL26BP53221 127 aaKnown RBP4.62□□□□□ -1.67
GEF1YJR040W AIR2Q12476 344 aaKnown RBP4.62□□□□□ -1.67
GEF1YJR040W YOR020W-AQ3E824 90 aa4.62□□□□□ -1.67
GEF1YJR040W RPS11AP0CX47 156 aaKnown RBP4.61□□□□□ -1.67
GEF1YJR040W RPS11BP0CX48 156 aaKnown RBP4.61□□□□□ -1.67
GEF1YJR040W SPT4P32914 102 aaPredicted RBP4.61□□□□□ -1.67
GEF1YJR040W YBR219CP38317 127 aa4.61□□□□□ -1.67
GEF1YJR040W MMS2P53152 137 aa4.61□□□□□ -1.67
GEF1YJR040W YOR381W-AQ3E804 55 aa4.61□□□□□ -1.67
GEF1YJR040W RSM18P40033 138 aa4.61□□□□□ -1.67
GEF1YJR040W RPR2P40571 144 aa4.61□□□□□ -1.67
GEF1YJR040W YGR121W-AQ3E816 71 aa4.61□□□□□ -1.67
GEF1YJR040W COX14P39103 70 aa4.6□□□□□ -1.67
GEF1YJR040W YLR162WQ06235 118 aa4.6□□□□□ -1.67
GEF1YJR040W YLL006W-AQ3E814 58 aa4.6□□□□□ -1.67
GEF1YJR040W UTP20P35194 2493 aaKnown RBP4.6□□□□□ -1.67
GEF1YJR040W YOR314WQ12506 109 aa4.6□□□□□ -1.67
GEF1YJR040W YFR009W-AP0C5M9 85 aa4.59□□□□□ -1.67
GEF1YJR040W SAP30P38429 201 aa4.59□□□□□ -1.67
GEF1YJR040W YPS5P53057 165 aa4.59□□□□□ -1.67
GEF1YJR040W VAM10Q08474 114 aa4.59□□□□□ -1.67
GEF1YJR040W YHL005CP38752 130 aa4.57□□□□□ -1.68
GEF1YJR040W YOL166W-AQ8TGJ1 51 aa4.57□□□□□ -1.68
GEF1YJR040W RPL36BO14455 100 aaKnown RBP4.57□□□□□ -1.68
GEF1YJR040W RPL36AP05745 100 aaPredicted RBP4.57□□□□□ -1.68
GEF1YJR040W YBL081WP38180 368 aaKnown RBP4.57□□□□□ -1.68
GEF1YJR040W TDA2P40045 126 aa4.57□□□□□ -1.68
GEF1YJR040W YDR182W-AQ3E796 67 aa4.56□□□□□ -1.68
GEF1YJR040W HHF1P02309 103 aaKnown RBP4.55□□□□□ -1.68
GEF1YJR040W YLR122CQ12312 125 aa4.55□□□□□ -1.68
GEF1YJR040W YOR376W-AQ3E805 51 aa4.55□□□□□ -1.68
GEF1YJR040W DYN1P36022 4092 aa4.55□□□□□ -1.68
GEF1YJR040W YCR001WP25347 104 aa4.55□□□□□ -1.68
GEF1YJR040W SMD1Q02260 146 aaPredicted RBP4.55□□□□□ -1.68
GEF1YJR040W CRC1Q12289 327 aa4.55□□□□□ -1.68
GEF1YJR040W RPS30AP0CX33 63 aaKnown RBP4.54□□□□□ -1.68
GEF1YJR040W RPS30BP0CX34 63 aaKnown RBP4.54□□□□□ -1.68
GEF1YJR040W YGL034CP53186 121 aa4.54□□□□□ -1.68
GEF1YJR040W YMR122CQ03879 124 aa4.53□□□□□ -1.68
GEF1YJR040W YMR122W-AQ3E842 84 aa4.53□□□□□ -1.68
GEF1YJR040W YOL014WQ08110 124 aa4.51□□□□□ -1.69
GEF1YJR040W TSC3Q3E790 80 aa4.51□□□□□ -1.69
GEF1YJR040W YGR240C-AQ3E786 66 aa4.51□□□□□ -1.69
GEF1YJR040W YER188C-AP0C0V2 99 aa4.5□□□□□ -1.69
GEF1YJR040W SGF11Q03067 99 aa4.5□□□□□ -1.69
GEF1YJR040W OST5Q92316 86 aa4.49□□□□□ -1.69
GEF1YJR040W YKL065W-AQ2V2P2 73 aa4.49□□□□□ -1.69
GEF1YJR040W HOT13P36078 116 aa4.47□□□□□ -1.69
GEF1YJR040W YPR153WQ06537 140 aa4.47□□□□□ -1.69
GEF1YJR040W YIL102CP40488 101 aa4.46□□□□□ -1.69
GEF1YJR040W MVB12P42939 101 aa4.46□□□□□ -1.69
GEF1YJR040W AUA1P32450 94 aa4.46□□□□□ -1.7
GEF1YJR040W YEL045CP32616 141 aa4.45□□□□□ -1.7
GEF1YJR040W LIP1Q03579 150 aa4.45□□□□□ -1.7
GEF1YJR040W YAL064WP39711 94 aa4.45□□□□□ -1.7
GEF1YJR040W YPR010C-AA5Z2X5 72 aa4.44□□□□□ -1.7
GEF1YJR040W RPL29P05747 59 aaPredicted RBP4.44□□□□□ -1.7
GEF1YJR040W AQY2P0CD90 149 aa4.43□□□□□ -1.7
GEF1YJR040W COX23P38824 151 aa4.43□□□□□ -1.7
GEF1YJR040W RDS3Q06835 107 aaPredicted RBP4.43□□□□□ -1.7
GEF1YJR040W YML100W-AQ8TGT0 57 aa4.43□□□□□ -1.7
GEF1YJR040W RPC10P40422 70 aa4.42□□□□□ -1.7
GEF1YJR040W YDL241WQ07738 123 aa4.42□□□□□ -1.7
GEF1YJR040W YNL162W-AQ3E7A8 72 aa4.42□□□□□ -1.7
GEF1YJR040W YHR213W-BQ8TGK1 99 aa4.42□□□□□ -1.7
GEF1YJR040W SPC1P46965 94 aa4.41□□□□□ -1.7
GEF1YJR040W EDC2P40023 145 aaPredicted RBP4.41□□□□□ -1.7
GEF1YJR040W YDR010CQ12426 110 aa4.4□□□□□ -1.7
GEF1YJR040W YBL039W-BP0C268 59 aa4.39□□□□□ -1.71
GEF1YJR040W FYV5P25585 152 aa4.39□□□□□ -1.71
GEF1YJR040W YJL133C-AQ3E7A3 74 aa4.38□□□□□ -1.71
GEF1YJR040W RPL33AP05744 107 aaKnown RBP4.38□□□□□ -1.71
GEF1YJR040W RPL33BP41056 107 aaKnown RBP4.38□□□□□ -1.71
GEF1YJR040W IGD1P43598 195 aa4.38□□□□□ -1.71
GEF1YJR040W YJL127C-BQ3E828 52 aa4.37□□□□□ -1.71
GEF1YJR040W YAR023CD6VPM8 179 aa4.37□□□□□ -1.71
GEF1YJR040W YBR230W-AQ3E762 66 aa4.37□□□□□ -1.71
GEF1YJR040W YOL013W-AP0C272 63 aaPredicted RBP4.36□□□□□ -1.71
GEF1YJR040W YER175W-AQ8TGU4 54 aa4.36□□□□□ -1.71
GEF1YJR040W YDR115WQ04598 105 aa4.35□□□□□ -1.71
GEF1YJR040W YIL156W-BQ2V2P4 73 aa4.35□□□□□ -1.71
GEF1YJR040W YCR095W-AQ3E787 52 aa4.34□□□□□ -1.71
GEF1YJR040W Q0032Q9ZZX7 96 aa4.33□□□□□ -1.72
GEF1YJR040W RTC6O14464 93 aa4.33□□□□□ -1.72
GEF1YJR040W YLR157W-DP0CE99 70 aa4.32□□□□□ -1.72
GEF1YJR040W HUB1Q6Q546 73 aa4.32□□□□□ -1.72
GEF1YJR040W YLL066W-BQ8TGJ7 56 aa4.32□□□□□ -1.72
GEF1YJR040W SNA2P56508 79 aa4.31□□□□□ -1.72
GEF1YJR040W ECM19Q06011 112 aa4.31□□□□□ -1.72
GEF1YJR040W YGL193CP53097 103 aa4.3□□□□□ -1.72
GEF1YJR040W SDH6Q3E785 79 aa4.3□□□□□ -1.72
GEF1YJR040W YMR001C-AQ8TGS9 76 aa4.3□□□□□ -1.72
GEF1YJR040W YNL042W-BQ3E7Z2 85 aa4.3□□□□□ -1.72
GEF1YJR040W YLR307C-AQ3E825 87 aa4.3□□□□□ -1.72
GEF1YJR040W YHR125WP38831 101 aa4.28□□□□□ -1.72
GEF1YJR040W DDR48P18899 430 aaKnown RBP4.27□□□□□ -1.73
GEF1YJR040W YHR007C-AQ07074 71 aa4.27□□□□□ -1.73
GEF1YJR040W SPG1P50088 95 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms