RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C YHR130CP38834 111 aa2.19□□□□□ -2.06
VPS53YJL029C KSH1Q8TGJ3 72 aa2.19□□□□□ -2.06
VPS53YJL029C YJL127C-BQ3E828 52 aa2.19□□□□□ -2.06
VPS53YJL029C MRPL24P36525 258 aaPredicted RBP2.18□□□□□ -2.06
VPS53YJL029C PAU23Q07987 124 aa2.18□□□□□ -2.06
VPS53YJL029C KTI11Q3E840 82 aa2.17□□□□□ -2.06
VPS53YJL029C KRE1P17260 313 aa2.17□□□□□ -2.06
VPS53YJL029C YPR170W-BP0C5R9 85 aa2.16□□□□□ -2.06
VPS53YJL029C ELC1Q03071 99 aa2.16□□□□□ -2.06
VPS53YJL029C NHP2P32495 156 aaPredicted RBP2.16□□□□□ -2.06
VPS53YJL029C YOR072WQ08486 104 aa2.15□□□□□ -2.06
VPS53YJL029C MSA2P36157 363 aa2.15□□□□□ -2.07
VPS53YJL029C YFR057WP43625 151 aa2.15□□□□□ -2.07
VPS53YJL029C YMR230W-AQ3E7B5 62 aa2.15□□□□□ -2.07
VPS53YJL029C PAI3P01094 68 aa2.14□□□□□ -2.07
VPS53YJL029C YER181CP40097 107 aa2.14□□□□□ -2.07
VPS53YJL029C BSC4P53841 131 aa2.14□□□□□ -2.07
VPS53YJL029C YLR296WQ05898 108 aa2.14□□□□□ -2.07
VPS53YJL029C YLR363W-AQ3E747 85 aa2.14□□□□□ -2.07
VPS53YJL029C YLR361C-AQ3E795 98 aa2.14□□□□□ -2.07
VPS53YJL029C BET1P22804 142 aa2.13□□□□□ -2.07
VPS53YJL029C OST2P46964 130 aa2.13□□□□□ -2.07
VPS53YJL029C RPL36BO14455 100 aaKnown RBP2.13□□□□□ -2.07
VPS53YJL029C INO4P13902 151 aa2.13□□□□□ -2.07
VPS53YJL029C YHL018WP38744 120 aaPredicted RBP2.13□□□□□ -2.07
VPS53YJL029C YHR007C-AQ07074 71 aa2.13□□□□□ -2.07
VPS53YJL029C HUR1P45820 110 aa2.12□□□□□ -2.07
VPS53YJL029C LSM6Q06406 86 aaKnown RBP2.12□□□□□ -2.07
VPS53YJL029C YAL063C-AQ3E791 96 aa2.12□□□□□ -2.07
VPS53YJL029C MID2P36027 376 aa2.12□□□□□ -2.07
VPS53YJL029C YNL198CP40166 100 aa2.12□□□□□ -2.07
VPS53YJL029C ISD11Q6Q560 94 aa2.12□□□□□ -2.07
VPS53YJL029C YHL005CP38752 130 aa2.11□□□□□ -2.07
VPS53YJL029C YIR021W-AQ3E739 70 aa2.11□□□□□ -2.07
VPS53YJL029C TDA8Q6B2U8 126 aa2.11□□□□□ -2.07
VPS53YJL029C YFL065CP43539 102 aa2.1□□□□□ -2.07
VPS53YJL029C YPR203WQ08994 102 aa2.1□□□□□ -2.07
VPS53YJL029C YHR139C-AO13536 103 aa2.1□□□□□ -2.07
VPS53YJL029C YBR027CP38220 110 aa2.1□□□□□ -2.07
VPS53YJL029C TSC3Q3E790 80 aa2.1□□□□□ -2.07
VPS53YJL029C YOL097W-AQ3E7Y9 61 aa2.1□□□□□ -2.07
VPS53YJL029C COX7P10174 60 aa2.09□□□□□ -2.07
VPS53YJL029C MPC3P53311 146 aa2.09□□□□□ -2.07
VPS53YJL029C YKL183C-AQ3E765 70 aa2.09□□□□□ -2.07
VPS53YJL029C YLR157W-DP0CE99 70 aa2.09□□□□□ -2.08
VPS53YJL029C ATX1P38636 73 aa2.08□□□□□ -2.08
VPS53YJL029C YNL122CP53921 115 aaPredicted RBP2.08□□□□□ -2.08
VPS53YJL029C DSE2P38844 325 aa2.08□□□□□ -2.08
VPS53YJL029C RSM18P40033 138 aa2.08□□□□□ -2.08
VPS53YJL029C YGR039WP53225 103 aa2.08□□□□□ -2.08
VPS53YJL029C RSM19P53733 91 aaPredicted RBP2.08□□□□□ -2.08
VPS53YJL029C YOR034C-AQ3E735 80 aa2.08□□□□□ -2.08
VPS53YJL029C YIL102C-AQ2V2P5 75 aa2.07□□□□□ -2.08
VPS53YJL029C HHF1P02309 103 aaKnown RBP2.07□□□□□ -2.08
VPS53YJL029C YJR107C-AP0CT86 78 aa2.07□□□□□ -2.08
VPS53YJL029C RPL37BP51402 88 aaKnown RBP2.07□□□□□ -2.08
VPS53YJL029C ATP18P81450 59 aa2.06□□□□□ -2.08
VPS53YJL029C YGL034CP53186 121 aa2.05□□□□□ -2.08
VPS53YJL029C ECM19Q06011 112 aa2.05□□□□□ -2.08
VPS53YJL029C YBR121C-AP0C5L4 52 aa2.05□□□□□ -2.08
VPS53YJL029C YLR162WQ06235 118 aa2.05□□□□□ -2.08
VPS53YJL029C SHH4Q06236 168 aa2.04□□□□□ -2.08
VPS53YJL029C YFR009W-AP0C5M9 85 aa2.03□□□□□ -2.08
VPS53YJL029C COX23P38824 151 aa2.03□□□□□ -2.08
VPS53YJL029C MIC10Q96VH5 97 aa2.03□□□□□ -2.08
VPS53YJL029C YHR213W-BQ8TGK1 99 aa2.02□□□□□ -2.09
VPS53YJL029C RPS28BP0C0X0 67 aaKnown RBP2.02□□□□□ -2.09
VPS53YJL029C YEL045CP32616 141 aa2.02□□□□□ -2.09
VPS53YJL029C YJL133C-AQ3E7A3 74 aa2.02□□□□□ -2.09
VPS53YJL029C RPS28AQ3E7X9 67 aaPredicted RBP2.02□□□□□ -2.09
VPS53YJL029C RAD6P06104 172 aa2.01□□□□□ -2.09
VPS53YJL029C YHR073W-AP0C5N7 58 aa2.01□□□□□ -2.09
VPS53YJL029C RPA12P32529 125 aaKnown RBP2.01□□□□□ -2.09
VPS53YJL029C ICS3P47034 131 aa2.01□□□□□ -2.09
VPS53YJL029C YAL067W-AQ8TGK6 75 aa2.01□□□□□ -2.09
VPS53YJL029C YCR085WP25650 117 aa2□□□□□ -2.09
VPS53YJL029C YDR119W-AQ2V2P9 66 aa2□□□□□ -2.09
VPS53YJL029C SBH1P52870 82 aa1.99□□□□□ -2.09
VPS53YJL029C COF1Q03048 143 aaKnown RBP1.99□□□□□ -2.09
VPS53YJL029C Q0017Q9ZZX8 53 aa1.99□□□□□ -2.09
VPS53YJL029C YDR381C-AQ3E6R5 114 aa1.98□□□□□ -2.09
VPS53YJL029C YFL041W-AQ3E817 63 aa1.98□□□□□ -2.09
VPS53YJL029C FYV12Q08559 129 aa1.98□□□□□ -2.09
VPS53YJL029C YCR050CP25630 102 aa1.97□□□□□ -2.09
VPS53YJL029C YGR164WP53291 111 aa1.97□□□□□ -2.09
VPS53YJL029C TDA2P40045 126 aa1.96□□□□□ -2.1
VPS53YJL029C YHL042WP38729 150 aa1.96□□□□□ -2.1
VPS53YJL029C SKI6P46948 246 aaPredicted RBP1.96□□□□□ -2.1
VPS53YJL029C RPL36AP05745 100 aaPredicted RBP1.94□□□□□ -2.1
VPS53YJL029C TOM6P33448 61 aa1.94□□□□□ -2.1
VPS53YJL029C YPL038W-AQ3E7B4 63 aa1.94□□□□□ -2.1
VPS53YJL029C PBI2P0CT04 75 aaKnown RBP1.93□□□□□ -2.1
VPS53YJL029C YOL014WQ08110 124 aa1.93□□□□□ -2.1
VPS53YJL029C ATP20Q12233 115 aa1.93□□□□□ -2.1
VPS53YJL029C YBL008W-AQ3E821 79 aa1.93□□□□□ -2.1
VPS53YJL029C YER187WP40102 141 aa1.93□□□□□ -2.1
VPS53YJL029C YAR064WP39563 99 aa1.92□□□□□ -2.1
VPS53YJL029C YDL012CQ12489 107 aa1.92□□□□□ -2.1
VPS53YJL029C YLR412C-AQ3E742 68 aa1.92□□□□□ -2.1
VPS53YJL029C YNL277W-AQ3E7Z0 62 aa1.92□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms