RNA–Protein interactions for RNA: YDR486C

VPS60, Transcript of Protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS60, Length 690 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS60YDR486C YHR007C-AQ07074 71 aa6.89□□□□□ -1.31
VPS60YDR486C DDR48P18899 430 aaKnown RBP6.88□□□□□ -1.31
VPS60YDR486C YGR121W-AQ3E816 71 aa6.88□□□□□ -1.31
VPS60YDR486C YOR072WQ08486 104 aa6.87□□□□□ -1.31
VPS60YDR486C RPL36BO14455 100 aaKnown RBP6.85□□□□□ -1.31
VPS60YDR486C SPG1P50088 95 aa6.85□□□□□ -1.31
VPS60YDR486C ATP18P81450 59 aa6.85□□□□□ -1.31
VPS60YDR486C TSC3Q3E790 80 aa6.85□□□□□ -1.31
VPS60YDR486C YFR009W-AP0C5M9 85 aa6.83□□□□□ -1.32
VPS60YDR486C OST2P46964 130 aa6.83□□□□□ -1.32
VPS60YDR486C YHR139C-AO13536 103 aa6.82□□□□□ -1.32
VPS60YDR486C YMR230W-AQ3E7B5 62 aa6.82□□□□□ -1.32
VPS60YDR486C YFL067WP43537 175 aa6.81□□□□□ -1.32
VPS60YDR486C YJR085CP47131 105 aaKnown RBP6.81□□□□□ -1.32
VPS60YDR486C YGL149WP53116 101 aa6.81□□□□□ -1.32
VPS60YDR486C YOR268CQ08734 132 aa6.81□□□□□ -1.32
VPS60YDR486C PBI2P0CT04 75 aaKnown RBP6.8□□□□□ -1.32
VPS60YDR486C YAR1P46683 200 aa6.78□□□□□ -1.32
VPS60YDR486C ATX1P38636 73 aa6.77□□□□□ -1.33
VPS60YDR486C KRE1P17260 313 aa6.76□□□□□ -1.33
VPS60YDR486C YDR381C-AQ3E6R5 114 aa6.76□□□□□ -1.33
VPS60YDR486C RSM18P40033 138 aa6.75□□□□□ -1.33
VPS60YDR486C YCR085WP25650 117 aa6.74□□□□□ -1.33
VPS60YDR486C YBR027CP38220 110 aa6.74□□□□□ -1.33
VPS60YDR486C TDA8Q6B2U8 126 aa6.74□□□□□ -1.33
VPS60YDR486C YNL184CP53876 108 aa6.73□□□□□ -1.33
VPS60YDR486C YHR213W-BQ8TGK1 99 aa6.73□□□□□ -1.33
VPS60YDR486C ICS3P47034 131 aa6.72□□□□□ -1.33
VPS60YDR486C EDC1P53080 175 aaPredicted RBP6.72□□□□□ -1.33
VPS60YDR486C INO4P13902 151 aa6.71□□□□□ -1.34
VPS60YDR486C RSM19P53733 91 aaPredicted RBP6.7□□□□□ -1.34
VPS60YDR486C SKI6P46948 246 aaPredicted RBP6.69□□□□□ -1.34
VPS60YDR486C SHH4Q06236 168 aa6.69□□□□□ -1.34
VPS60YDR486C YDR010CQ12426 110 aa6.69□□□□□ -1.34
VPS60YDR486C YJL197C-AP0C5P0 93 aa6.68□□□□□ -1.34
VPS60YDR486C YJL133C-AQ3E7A3 74 aa6.68□□□□□ -1.34
VPS60YDR486C SLO1Q3E784 85 aa6.67□□□□□ -1.34
VPS60YDR486C COX23P38824 151 aa6.66□□□□□ -1.34
VPS60YDR486C RAD6P06104 172 aa6.65□□□□□ -1.34
VPS60YDR486C RPL38P49167 78 aaKnown RBP6.65□□□□□ -1.34
VPS60YDR486C ECM19Q06011 112 aa6.65□□□□□ -1.34
VPS60YDR486C YLR162WQ06235 118 aa6.64□□□□□ -1.35
VPS60YDR486C YOL014WQ08110 124 aa6.63□□□□□ -1.35
VPS60YDR486C YAL063C-AQ3E791 96 aa6.63□□□□□ -1.35
VPS60YDR486C TDA2P40045 126 aa6.62□□□□□ -1.35
VPS60YDR486C ISD11Q6Q560 94 aa6.62□□□□□ -1.35
VPS60YDR486C MIC10Q96VH5 97 aa6.62□□□□□ -1.35
VPS60YDR486C YEL045CP32616 141 aa6.6□□□□□ -1.35
VPS60YDR486C KTI11Q3E840 82 aa6.6□□□□□ -1.35
VPS60YDR486C KSH1Q8TGJ3 72 aa6.59□□□□□ -1.35
VPS60YDR486C EMC6Q12431 108 aa6.57□□□□□ -1.36
VPS60YDR486C RPP2AP05319 106 aaKnown RBP6.56□□□□□ -1.36
VPS60YDR486C HOT13P36078 116 aa6.56□□□□□ -1.36
VPS60YDR486C COF1Q03048 143 aaKnown RBP6.56□□□□□ -1.36
VPS60YDR486C YLR157W-DP0CE99 70 aa6.55□□□□□ -1.36
VPS60YDR486C RUB1Q03919 77 aa6.55□□□□□ -1.36
VPS60YDR486C YOL097W-AQ3E7Y9 61 aa6.55□□□□□ -1.36
VPS60YDR486C ATP20Q12233 115 aa6.54□□□□□ -1.36
VPS60YDR486C YFL041W-AQ3E817 63 aa6.54□□□□□ -1.36
VPS60YDR486C YHL042WP38729 150 aa6.53□□□□□ -1.36
VPS60YDR486C YFL065CP43539 102 aa6.51□□□□□ -1.37
VPS60YDR486C YPR203WQ08994 102 aa6.51□□□□□ -1.37
VPS60YDR486C YLR285C-AQ3E771 56 aa6.5□□□□□ -1.37
VPS60YDR486C YBR182C-AQ8TGU6 64 aa6.49□□□□□ -1.37
VPS60YDR486C YCR050CP25630 102 aa6.48□□□□□ -1.37
VPS60YDR486C YCR043CP25361 127 aa6.47□□□□□ -1.37
VPS60YDR486C YSY6P38374 65 aa6.47□□□□□ -1.37
VPS60YDR486C YHL005CP38752 130 aa6.46□□□□□ -1.38
VPS60YDR486C YHL018WP38744 120 aaPredicted RBP6.43□□□□□ -1.38
VPS60YDR486C YOR304C-AO14468 76 aa6.42□□□□□ -1.38
VPS60YDR486C YAR064WP39563 99 aa6.38□□□□□ -1.39
VPS60YDR486C RPL36AP05745 100 aaPredicted RBP6.35□□□□□ -1.39
VPS60YDR486C YKL183C-AQ3E765 70 aa6.35□□□□□ -1.39
VPS60YDR486C SOH1P38633 127 aa6.34□□□□□ -1.39
VPS60YDR486C YPL080CQ02826 108 aa6.33□□□□□ -1.4
VPS60YDR486C YDL012CQ12489 107 aa6.33□□□□□ -1.4
VPS60YDR486C COX7P10174 60 aa6.31□□□□□ -1.4
VPS60YDR486C YGR039WP53225 103 aa6.29□□□□□ -1.4
VPS60YDR486C YDR119W-AQ2V2P9 66 aa6.29□□□□□ -1.4
VPS60YDR486C CMC4Q3E7A9 73 aa6.29□□□□□ -1.4
VPS60YDR486C YHR073W-AP0C5N7 58 aa6.28□□□□□ -1.4
VPS60YDR486C YKL069WP36088 180 aa6.27□□□□□ -1.41
VPS60YDR486C YNL122CP53921 115 aaPredicted RBP6.27□□□□□ -1.41
VPS60YDR486C YLR361C-AQ3E795 98 aa6.26□□□□□ -1.41
VPS60YDR486C YPR153WQ06537 140 aa6.25□□□□□ -1.41
VPS60YDR486C YOR314WQ12506 109 aa6.25□□□□□ -1.41
VPS60YDR486C YER187WP40102 141 aa6.24□□□□□ -1.41
VPS60YDR486C YPL038W-AQ3E7B4 63 aa6.23□□□□□ -1.41
VPS60YDR486C NOP10Q6Q547 58 aaPredicted RBP6.23□□□□□ -1.41
VPS60YDR486C YOL013W-AP0C272 63 aaPredicted RBP6.2□□□□□ -1.42
VPS60YDR486C YIL102CP40488 101 aa6.18□□□□□ -1.42
VPS60YDR486C LIP1Q03579 150 aa6.18□□□□□ -1.42
VPS60YDR486C YDR246W-AQ3E763 66 aa6.18□□□□□ -1.42
VPS60YDR486C YOR316C-AQ3E806 69 aa6.16□□□□□ -1.42
VPS60YDR486C YGR164WP53291 111 aa6.14□□□□□ -1.43
VPS60YDR486C YJR128WP47162 119 aa6.11□□□□□ -1.43
VPS60YDR486C YIL002W-AQ3E7Z5 69 aa6.1□□□□□ -1.43
VPS60YDR486C YOL166W-AQ8TGJ1 51 aa6.1□□□□□ -1.43
VPS60YDR486C HHF1P02309 103 aaKnown RBP6.09□□□□□ -1.43
VPS60YDR486C AIM4P38305 123 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms