RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YGR018CP53211 109 aa2.61□□□□□ -1.99
SPT3YDR392W YGR240C-AQ3E786 66 aa2.61□□□□□ -1.99
SPT3YDR392W RRT15Q3E811 62 aa2.61□□□□□ -1.99
SPT3YDR392W YER135CP40082 130 aa2.6□□□□□ -1.99
SPT3YDR392W SPI1P40092 148 aa2.6□□□□□ -1.99
SPT3YDR392W KEG1P43614 200 aa2.6□□□□□ -1.99
SPT3YDR392W ATP20Q12233 115 aa2.6□□□□□ -1.99
SPT3YDR392W YLR156WP0CE96 114 aa2.59□□□□□ -1.99
SPT3YDR392W YLR159WP0CE97 114 aa2.59□□□□□ -1.99
SPT3YDR392W YLR161WP0CE98 114 aa2.59□□□□□ -1.99
SPT3YDR392W YHR213WP0CI67 198 aa2.59□□□□□ -1.99
SPT3YDR392W SHU1P38751 150 aa2.59□□□□□ -1.99
SPT3YDR392W RPL38P49167 78 aaKnown RBP2.59□□□□□ -1.99
SPT3YDR392W ICY1Q04329 127 aa2.59□□□□□ -1.99
SPT3YDR392W IRC21Q04772 201 aa2.59□□□□□ -1.99
SPT3YDR392W YOR381W-AQ3E804 55 aa2.59□□□□□ -1.99
SPT3YDR392W QCR8P08525 94 aa2.58□□□□□ -2
SPT3YDR392W TDA2P40045 126 aa2.58□□□□□ -2
SPT3YDR392W YMR175W-AQ3E766 64 aa2.58□□□□□ -2
SPT3YDR392W MIC10Q96VH5 97 aa2.58□□□□□ -2
SPT3YDR392W YAR023CD6VPM8 179 aa2.57□□□□□ -2
SPT3YDR392W YJR107C-AP0CT86 78 aa2.57□□□□□ -2
SPT3YDR392W RSM18P40033 138 aa2.57□□□□□ -2
SPT3YDR392W YGL149WP53116 101 aa2.57□□□□□ -2
SPT3YDR392W TSC3Q3E790 80 aa2.57□□□□□ -2
SPT3YDR392W RPL26AP05743 127 aaKnown RBP2.56□□□□□ -2
SPT3YDR392W RPL16AP26784 199 aaKnown RBP2.56□□□□□ -2
SPT3YDR392W SPT4P32914 102 aaPredicted RBP2.56□□□□□ -2
SPT3YDR392W MSA2P36157 363 aa2.56□□□□□ -2
SPT3YDR392W ICS3P47034 131 aa2.56□□□□□ -2
SPT3YDR392W YPS5P53057 165 aa2.56□□□□□ -2
SPT3YDR392W YGL088WP53151 121 aa2.56□□□□□ -2
SPT3YDR392W RPL26BP53221 127 aaKnown RBP2.56□□□□□ -2
SPT3YDR392W MRPS12P53732 153 aa2.56□□□□□ -2
SPT3YDR392W YOR314WQ12506 109 aa2.56□□□□□ -2
SPT3YDR392W ARC15P40518 154 aaRIP-Chip data2.55□□□□□ -2not detected
SPT3YDR392W ERI1P62651 68 aaKnown RBP2.55□□□□□ -2
SPT3YDR392W YOR268CQ08734 132 aa2.55□□□□□ -2
SPT3YDR392W YOR034C-AQ3E735 80 aa2.55□□□□□ -2
SPT3YDR392W YIL102CP40488 101 aa2.54□□□□□ -2
SPT3YDR392W IMP2P46972 177 aa2.54□□□□□ -2
SPT3YDR392W YJR146WP47174 117 aa2.54□□□□□ -2
SPT3YDR392W MPC3P53311 146 aa2.54□□□□□ -2
SPT3YDR392W RGM1Q00453 211 aa2.54□□□□□ -2
SPT3YDR392W YOL160WQ08321 113 aa2.54□□□□□ -2
SPT3YDR392W YOR020W-AQ3E824 90 aa2.54□□□□□ -2
SPT3YDR392W YHL005CP38752 130 aa2.53□□□□□ -2
SPT3YDR392W ATP18P81450 59 aa2.53□□□□□ -2
SPT3YDR392W TDA8Q6B2U8 126 aa2.53□□□□□ -2
SPT3YDR392W OST5Q92316 86 aa2.53□□□□□ -2
SPT3YDR392W RPL36BO14455 100 aaKnown RBP2.52□□□□□ -2.01
SPT3YDR392W RPL33AP05744 107 aaKnown RBP2.52□□□□□ -2.01
SPT3YDR392W RPL36AP05745 100 aaPredicted RBP2.52□□□□□ -2.01
SPT3YDR392W YEL008WP40001 126 aa2.52□□□□□ -2.01
SPT3YDR392W RPL33BP41056 107 aaKnown RBP2.52□□□□□ -2.01
SPT3YDR392W EDC1P53080 175 aaPredicted RBP2.52□□□□□ -2.01
SPT3YDR392W YOR376W-AQ3E805 51 aa2.52□□□□□ -2.01
SPT3YDR392W SMD1Q02260 146 aaPredicted RBP2.51□□□□□ -2.01
SPT3YDR392W YKL065W-AQ2V2P2 73 aa2.51□□□□□ -2.01
SPT3YDR392W YBR200W-AQ3E755 54 aa2.51□□□□□ -2.01
SPT3YDR392W YDR182W-AQ3E796 67 aa2.51□□□□□ -2.01
SPT3YDR392W NOP10Q6Q547 58 aaPredicted RBP2.51□□□□□ -2.01
SPT3YDR392W YAL065CO13511 128 aa2.5□□□□□ -2.01
SPT3YDR392W YGR025WP53216 100 aa2.5□□□□□ -2.01
SPT3YDR392W PMP3P87284 55 aa2.5□□□□□ -2.01
SPT3YDR392W YLR162WQ06235 118 aa2.5□□□□□ -2.01
SPT3YDR392W YDR246W-AQ3E763 66 aa2.5□□□□□ -2.01
SPT3YDR392W YLL006W-AQ3E814 58 aa2.5□□□□□ -2.01
SPT3YDR392W YLR236CA0A023PZG4 107 aa2.49□□□□□ -2.01
SPT3YDR392W RPS30AP0CX33 63 aaKnown RBP2.49□□□□□ -2.01
SPT3YDR392W RPS30BP0CX34 63 aaKnown RBP2.49□□□□□ -2.01
SPT3YDR392W YMR122CQ03879 124 aa2.49□□□□□ -2.01
SPT3YDR392W YDR115WQ04598 105 aa2.49□□□□□ -2.01
SPT3YDR392W SPG1P50088 95 aa2.48□□□□□ -2.01
SPT3YDR392W YGR121W-AQ3E816 71 aa2.48□□□□□ -2.01
SPT3YDR392W YER188C-AP0C0V2 99 aa2.47□□□□□ -2.01
SPT3YDR392W COX14P39103 70 aa2.47□□□□□ -2.01
SPT3YDR392W YAL064WP39711 94 aa2.47□□□□□ -2.01
SPT3YDR392W YML100W-AQ8TGT0 57 aa2.47□□□□□ -2.01
SPT3YDR392W YFR009W-AP0C5M9 85 aa2.46□□□□□ -2.02
SPT3YDR392W YGL034CP53186 121 aa2.46□□□□□ -2.02
SPT3YDR392W LIP1Q03579 150 aa2.46□□□□□ -2.02
SPT3YDR392W YPR153WQ06537 140 aa2.46□□□□□ -2.02
SPT3YDR392W CCW12Q12127 133 aa2.46□□□□□ -2.02
SPT3YDR392W YCR095W-AQ3E787 52 aa2.46□□□□□ -2.02
SPT3YDR392W HUB1Q6Q546 73 aa2.46□□□□□ -2.02
SPT3YDR392W YPR010C-AA5Z2X5 72 aa2.45□□□□□ -2.02
SPT3YDR392W YOL166W-AQ8TGJ1 51 aa2.44□□□□□ -2.02
SPT3YDR392W EDC2P40023 145 aaPredicted RBP2.43□□□□□ -2.02
SPT3YDR392W YJR085CP47131 105 aaKnown RBP2.43□□□□□ -2.02
SPT3YDR392W SDH6Q3E785 79 aa2.43□□□□□ -2.02
SPT3YDR392W YMR122W-AQ3E842 84 aa2.43□□□□□ -2.02
SPT3YDR392W YLR157W-DP0CE99 70 aa2.42□□□□□ -2.02
SPT3YDR392W FYV5P25585 152 aa2.42□□□□□ -2.02
SPT3YDR392W COX23P38824 151 aa2.42□□□□□ -2.02
SPT3YDR392W YHR213W-BQ8TGK1 99 aa2.42□□□□□ -2.02
SPT3YDR392W MVB12P42939 101 aa2.41□□□□□ -2.02
SPT3YDR392W SNA2P56508 79 aa2.41□□□□□ -2.02
SPT3YDR392W YJL133C-AQ3E7A3 74 aa2.41□□□□□ -2.02
SPT3YDR392W YBL039W-BP0C268 59 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms