RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeastyeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA1YDR358W BSC4P53841 131 aa1.99□□□□□ -2.09
GGA1YDR358W SEC16P48415 2195 aaKnown RBP1.99□□□□□ -2.09
GGA1YDR358W VPS13Q07878 3144 aa1.98□□□□□ -2.09
GGA1YDR358W FKS3Q04952 1785 aa1.98□□□□□ -2.09
GGA1YDR358W RPA12P32529 125 aaKnown RBP1.98□□□□□ -2.09
GGA1YDR358W RPL43AP0CX25 92 aaKnown RBP1.96□□□□□ -2.1
GGA1YDR358W RPL43BP0CX26 92 aa1.96□□□□□ -2.1
GGA1YDR358W YOR343CQ12484 108 aa1.96□□□□□ -2.1
GGA1YDR358W APC1P53886 1748 aa1.95□□□□□ -2.1
GGA1YDR358W YBR072C-AQ3E794 53 aa1.95□□□□□ -2.1
GGA1YDR358W FAS2P19097 1887 aaKnown RBP1.95□□□□□ -2.1
GGA1YDR358W PRP8P33334 2413 aaKnown RBP1.95□□□□□ -2.1
GGA1YDR358W POC4Q12245 148 aaPredicted RBP1.93□□□□□ -2.1
GGA1YDR358W TOM6P33448 61 aa1.93□□□□□ -2.1
GGA1YDR358W YHR173CP38864 112 aa1.93□□□□□ -2.1
GGA1YDR358W RPL37BP51402 88 aaKnown RBP1.93□□□□□ -2.1
GGA1YDR358W UTP20P35194 2493 aaKnown RBP1.91□□□□□ -2.1
GGA1YDR358W YDR034W-BQ6Q5X2 51 aa1.91□□□□□ -2.1
GGA1YDR358W NUP192P47054 1683 aa1.9□□□□□ -2.11
GGA1YDR358W RIM15P43565 1770 aa1.9□□□□□ -2.11
GGA1YDR358W FIG2P25653 1609 aa1.89□□□□□ -2.11
GGA1YDR358W URA2P07259 2214 aaKnown RBP1.89□□□□□ -2.11
GGA1YDR358W TY4B-HP0C2J7 1802 aa1.89□□□□□ -2.11
GGA1YDR358W FPR2P32472 135 aa1.89□□□□□ -2.11
GGA1YDR358W YDR010CQ12426 110 aa1.89□□□□□ -2.11
GGA1YDR358W YNL042W-BQ3E7Z2 85 aa1.89□□□□□ -2.11
GGA1YDR358W YLR307C-AQ3E825 87 aa1.89□□□□□ -2.11
GGA1YDR358W YHR214C-DP0CX93 97 aa1.88□□□□□ -2.11
GGA1YDR358W AUA1P32450 94 aa1.88□□□□□ -2.11
GGA1YDR358W PDX3P38075 228 aaKnown RBP1.88□□□□□ -2.11
GGA1YDR358W PAU23Q07987 124 aa1.87□□□□□ -2.11
GGA1YDR358W PAU17Q12370 124 aa1.87□□□□□ -2.11
GGA1YDR358W SEN1Q00416 2231 aaKnown RBP1.87□□□□□ -2.11
GGA1YDR358W YLR157W-EP0CF00 54 aa1.86□□□□□ -2.11
GGA1YDR358W YOR105WQ08504 108 aa1.86□□□□□ -2.11
GGA1YDR358W FMP27Q06179 2628 aa1.86□□□□□ -2.11
GGA1YDR358W YPR145C-AQ2V2P0 78 aa1.86□□□□□ -2.11
GGA1YDR358W YKL065W-AQ2V2P2 73 aa1.86□□□□□ -2.11
GGA1YDR358W POL2P21951 2222 aaKnown RBP1.85□□□□□ -2.11
GGA1YDR358W YER188C-AP0C0V2 99 aa1.84□□□□□ -2.11
GGA1YDR358W YDR381C-AQ3E6R5 114 aa1.84□□□□□ -2.11
GGA1YDR358W Q0032Q9ZZX7 96 aa1.84□□□□□ -2.11
GGA1YDR358W YAL065CO13511 128 aa1.83□□□□□ -2.12
GGA1YDR358W YBR201C-AQ2V2Q3 67 aa1.83□□□□□ -2.12
GGA1YDR358W YHR213W-AQ8TGT4 77 aa1.83□□□□□ -2.12
GGA1YDR358W YOR314WQ12506 109 aa1.83□□□□□ -2.12
GGA1YDR358W LSM2P38203 95 aaKnown RBP1.81□□□□□ -2.12
GGA1YDR358W YMR122W-AQ3E842 84 aa1.81□□□□□ -2.12
GGA1YDR358W COX7P10174 60 aa1.8□□□□□ -2.12
GGA1YDR358W NOP10Q6Q547 58 aaPredicted RBP1.8□□□□□ -2.12
GGA1YDR358W RPL38P49167 78 aaKnown RBP1.77□□□□□ -2.13
GGA1YDR358W SWM2P40342 146 aa1.77□□□□□ -2.13
GGA1YDR358W RPC10P40422 70 aa1.77□□□□□ -2.13
GGA1YDR358W YIL156W-BQ2V2P4 73 aa1.77□□□□□ -2.13
GGA1YDR358W MLP1Q02455 1875 aaKnown RBP1.76□□□□□ -2.13
GGA1YDR358W ATP18P81450 59 aa1.76□□□□□ -2.13
GGA1YDR358W YDR119W-AQ2V2P9 66 aa1.76□□□□□ -2.13
GGA1YDR358W IRA1P18963 3092 aa1.75□□□□□ -2.13
GGA1YDR358W YOL164W-AQ3E7A5 60 aa1.73□□□□□ -2.13
GGA1YDR358W FLO1P32768 1537 aa1.71□□□□□ -2.14
GGA1YDR358W PAI3P01094 68 aa1.71□□□□□ -2.14
GGA1YDR358W QCR9P22289 66 aa1.71□□□□□ -2.14
GGA1YDR358W YOL097W-AQ3E7Y9 61 aa1.71□□□□□ -2.14
GGA1YDR358W YJR107C-AP0CT86 78 aa1.7□□□□□ -2.14
GGA1YDR358W YNL198CP40166 100 aa1.7□□□□□ -2.14
GGA1YDR358W YNL190WP53872 204 aa1.7□□□□□ -2.14
GGA1YDR358W SGF11Q03067 99 aa1.69□□□□□ -2.14
GGA1YDR358W SDH6Q3E785 79 aa1.69□□□□□ -2.14
GGA1YDR358W YGR121W-AQ3E816 71 aa1.69□□□□□ -2.14
GGA1YDR358W HKR1P41809 1802 aa1.68□□□□□ -2.14
GGA1YDR358W IRA2P19158 3079 aa1.68□□□□□ -2.14
GGA1YDR358W PMD1P32634 1753 aa1.67□□□□□ -2.14
GGA1YDR358W ECM29P38737 1868 aa1.66□□□□□ -2.14
GGA1YDR358W YDL022C-AP0C5L6 82 aa1.64□□□□□ -2.15
GGA1YDR358W TIM12P32830 109 aa1.64□□□□□ -2.15
GGA1YDR358W ATX1P38636 73 aa1.64□□□□□ -2.15
GGA1YDR358W UTP10P42945 1769 aaKnown RBP1.63□□□□□ -2.15
GGA1YDR358W MDN1Q12019 4910 aaKnown RBP1.63□□□□□ -2.15
GGA1YDR358W YPR108W-AQ3E7B3 70 aa1.62□□□□□ -2.15
GGA1YDR358W MOT1P32333 1867 aa1.62□□□□□ -2.15
GGA1YDR358W YGR035W-AQ45U48 73 aa1.61□□□□□ -2.15
GGA1YDR358W MEC1P38111 2368 aa1.6□□□□□ -2.15
GGA1YDR358W CSF1Q12150 2958 aa1.6□□□□□ -2.15
GGA1YDR358W YFL041W-AQ3E817 63 aa1.6□□□□□ -2.15
GGA1YDR358W YBR032WP38223 100 aa1.59□□□□□ -2.15
GGA1YDR358W BLM10P43583 2143 aa1.59□□□□□ -2.16
GGA1YDR358W PAU7P39545 55 aa1.57□□□□□ -2.16
GGA1YDR358W ATP17Q06405 101 aa1.57□□□□□ -2.16
GGA1YDR358W STT4P37297 1900 aa1.56□□□□□ -2.16
GGA1YDR358W SSS1P35179 80 aa1.55□□□□□ -2.16
GGA1YDR358W RPS29BP41058 56 aaKnown RBP1.55□□□□□ -2.16
GGA1YDR358W DYN1P36022 4092 aa1.54□□□□□ -2.16
GGA1YDR358W EDC1P53080 175 aaPredicted RBP1.54□□□□□ -2.16
GGA1YDR358W SPI1P40092 148 aa1.52□□□□□ -2.17
GGA1YDR358W TRA1P38811 3744 aa1.51□□□□□ -2.17
GGA1YDR358W BPH1P25356 2167 aa1.51□□□□□ -2.17
GGA1YDR358W YFR009W-AP0C5M9 85 aa1.51□□□□□ -2.17
GGA1YDR358W YDR524C-BQ3E6R4 66 aa1.51□□□□□ -2.17
GGA1YDR358W YKL018C-AQ3E7A7 99 aa1.51□□□□□ -2.17
GGA1YDR358W YIL134C-AQ45U18 67 aa1.51□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 42.7 ms