RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W HSK3P69852 69 aa1.81□□□□□ -2.12
SWR1YDR334W YLR194CQ05777 254 aa1.8□□□□□ -2.12
SWR1YDR334W YFR009W-AP0C5M9 85 aa1.8□□□□□ -2.12
SWR1YDR334W SOM1Q05676 74 aa1.8□□□□□ -2.12
SWR1YDR334W SMD3P43321 101 aaKnown RBP1.8□□□□□ -2.12
SWR1YDR334W WWM1P43582 211 aaKnown RBP1.8□□□□□ -2.12
SWR1YDR334W MRPS12P53732 153 aa1.8□□□□□ -2.12
SWR1YDR334W YMR122CQ03879 124 aa1.79□□□□□ -2.12
SWR1YDR334W YOR034C-AQ3E735 80 aa1.79□□□□□ -2.12
SWR1YDR334W Q0017Q9ZZX8 53 aa1.79□□□□□ -2.12
SWR1YDR334W QCR9P22289 66 aa1.79□□□□□ -2.12
SWR1YDR334W YNL122CP53921 115 aaPredicted RBP1.79□□□□□ -2.12
SWR1YDR334W YGR035W-AQ45U48 73 aa1.79□□□□□ -2.12
SWR1YDR334W ATP15P21306 62 aa1.79□□□□□ -2.12
SWR1YDR334W YBL071CP38185 102 aa1.79□□□□□ -2.12
SWR1YDR334W YAL064WP39711 94 aa1.79□□□□□ -2.12
SWR1YDR334W YHR050W-AQ05451 56 aa1.79□□□□□ -2.12
SWR1YDR334W SPT4P32914 102 aaPredicted RBP1.78□□□□□ -2.12
SWR1YDR334W YDR115WQ04598 105 aa1.78□□□□□ -2.12
SWR1YDR334W VMA9Q3E7B6 73 aa1.78□□□□□ -2.12
SWR1YDR334W MRPL38P35996 138 aaPredicted RBP1.78□□□□□ -2.12
SWR1YDR334W YER188C-AP0C0V2 99 aa1.78□□□□□ -2.12
SWR1YDR334W HOR7Q05827 59 aa1.78□□□□□ -2.12
SWR1YDR334W STF2P16965 84 aa1.78□□□□□ -2.13
SWR1YDR334W YHR213WP0CI67 198 aa1.77□□□□□ -2.13
SWR1YDR334W YEL028WP39989 153 aa1.77□□□□□ -2.13
SWR1YDR334W CMC4Q3E7A9 73 aa1.77□□□□□ -2.13
SWR1YDR334W SPI1P40092 148 aa1.76□□□□□ -2.13
SWR1YDR334W YLR285C-AQ3E771 56 aa1.76□□□□□ -2.13
SWR1YDR334W YIL046W-AQ3E7Z4 54 aa1.76□□□□□ -2.13
SWR1YDR334W YAR064WP39563 99 aa1.76□□□□□ -2.13
SWR1YDR334W YMR175W-AQ3E766 64 aa1.76□□□□□ -2.13
SWR1YDR334W YLL006W-AQ3E814 58 aa1.76□□□□□ -2.13
SWR1YDR334W YPL080CQ02826 108 aa1.76□□□□□ -2.13
SWR1YDR334W RPL43AP0CX25 92 aaKnown RBP1.75□□□□□ -2.13
SWR1YDR334W RPL43BP0CX26 92 aa1.75□□□□□ -2.13
SWR1YDR334W YJR146WP47174 117 aa1.75□□□□□ -2.13
SWR1YDR334W YDR278CQ05612 105 aa1.75□□□□□ -2.13
SWR1YDR334W YDR010CQ12426 110 aa1.75□□□□□ -2.13
SWR1YDR334W YJL133C-AQ3E7A3 74 aa1.75□□□□□ -2.13
SWR1YDR334W YGL235WP53071 178 aa1.74□□□□□ -2.13
SWR1YDR334W HUG1Q6Q5K6 68 aa1.74□□□□□ -2.13
SWR1YDR334W FLO9P39712 1322 aa1.74□□□□□ -2.13
SWR1YDR334W YBR027CP38220 110 aa1.74□□□□□ -2.13
SWR1YDR334W DDR2P89113 61 aa1.74□□□□□ -2.13
SWR1YDR334W YOR032W-AQ8TGS1 66 aa1.74□□□□□ -2.13
SWR1YDR334W RPL2AP0CX45 254 aaKnown RBP1.74□□□□□ -2.13
SWR1YDR334W RPL2BP0CX46 254 aaKnown RBP1.74□□□□□ -2.13
SWR1YDR334W YJR128WP47162 119 aa1.74□□□□□ -2.13
SWR1YDR334W YBL081WP38180 368 aaKnown RBP1.73□□□□□ -2.13
SWR1YDR334W BRP1P53194 125 aa1.73□□□□□ -2.13
SWR1YDR334W YLR361C-AQ3E795 98 aa1.73□□□□□ -2.13
SWR1YDR334W YGR018CP53211 109 aa1.72□□□□□ -2.13
SWR1YDR334W TDA8Q6B2U8 126 aa1.72□□□□□ -2.13
SWR1YDR334W YIL086CP40503 102 aa1.72□□□□□ -2.13
SWR1YDR334W RGM1Q00453 211 aa1.72□□□□□ -2.13
SWR1YDR334W RTC6O14464 93 aa1.72□□□□□ -2.13
SWR1YDR334W YPR195CQ06594 109 aa1.72□□□□□ -2.13
SWR1YDR334W YDR274CP87283 123 aa1.72□□□□□ -2.13
SWR1YDR334W YJL127C-BQ3E828 52 aa1.71□□□□□ -2.14
SWR1YDR334W YEL067CP39978 195 aa1.71□□□□□ -2.14
SWR1YDR334W EDC1P53080 175 aaPredicted RBP1.71□□□□□ -2.14
SWR1YDR334W YOL164W-AQ3E7A5 60 aa1.71□□□□□ -2.14
SWR1YDR334W YSF3P0C074 85 aaPredicted RBP1.71□□□□□ -2.14
SWR1YDR334W RPS11AP0CX47 156 aaKnown RBP1.7□□□□□ -2.14
SWR1YDR334W RPS11BP0CX48 156 aaKnown RBP1.7□□□□□ -2.14
SWR1YDR334W YCL042WP25572 119 aa1.69□□□□□ -2.14
SWR1YDR334W YGL193CP53097 103 aa1.69□□□□□ -2.14
SWR1YDR334W COX19Q3E731 98 aa1.69□□□□□ -2.14
SWR1YDR334W YGL014C-AP0C5N1 53 aa1.69□□□□□ -2.14
SWR1YDR334W YDR182W-AQ3E796 67 aa1.69□□□□□ -2.14
SWR1YDR334W SED1Q01589 338 aa1.68□□□□□ -2.14
SWR1YDR334W SLH1P53327 1967 aaKnown RBP1.68□□□□□ -2.14
SWR1YDR334W RPB9P27999 122 aa1.68□□□□□ -2.14
SWR1YDR334W YLR342W-AQ3E810 57 aa1.68□□□□□ -2.14
SWR1YDR334W YOR011W-AQ3E807 68 aa1.68□□□□□ -2.14
SWR1YDR334W TEL1P38110 2787 aa1.68□□□□□ -2.14
SWR1YDR334W YLR157W-EP0CF00 54 aa1.68□□□□□ -2.14
SWR1YDR334W YLR307C-AQ3E825 87 aa1.67□□□□□ -2.14
SWR1YDR334W YJL197C-AP0C5P0 93 aa1.67□□□□□ -2.14
SWR1YDR334W YGR146C-AQ8TGT9 53 aa1.66□□□□□ -2.14
SWR1YDR334W RPA12P32529 125 aaKnown RBP1.66□□□□□ -2.14
SWR1YDR334W YML100W-AQ8TGT0 57 aa1.66□□□□□ -2.14
SWR1YDR334W YAL065CO13511 128 aa1.65□□□□□ -2.14
SWR1YDR334W YHL037CP38733 133 aa1.65□□□□□ -2.14
SWR1YDR334W YDR246W-AQ3E763 66 aa1.65□□□□□ -2.15
SWR1YDR334W YBR056W-AI2HB52 66 aa1.65□□□□□ -2.15
SWR1YDR334W YOR316C-AQ3E806 69 aa1.65□□□□□ -2.15
SWR1YDR334W YOL013W-AP0C272 63 aaPredicted RBP1.64□□□□□ -2.15
SWR1YDR334W RPC10P40422 70 aa1.64□□□□□ -2.15
SWR1YDR334W YDR034C-AP0C289 58 aa1.64□□□□□ -2.15
SWR1YDR334W GIS2P53849 153 aaKnown RBP RIP-Chip data1.64□□□□□ -2.15not detected
SWR1YDR334W COX23P38824 151 aa1.63□□□□□ -2.15
SWR1YDR334W YLR255CO13574 117 aa1.63□□□□□ -2.15
SWR1YDR334W YKL023C-AQ2V2P3 75 aa1.63□□□□□ -2.15
SWR1YDR334W YOR394C-AQ8TGJ0 55 aa1.63□□□□□ -2.15
SWR1YDR334W RPS29BP41058 56 aaKnown RBP1.62□□□□□ -2.15
SWR1YDR334W CYR1P08678 2026 aaKnown RBP1.62□□□□□ -2.15
SWR1YDR334W TOM7P53507 60 aa1.62□□□□□ -2.15
SWR1YDR334W ACC1Q00955 2233 aaKnown RBP1.62□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms