RNA–Protein interactions for RNA: YDR301W

CFT1, Transcript of RNA-binding subunit of the mRNA cleavage and polyadenylation factor, yeastyeast

Gene CFT1, Length 4,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT1YDR301W TSC3Q3E790 80 aa1.12□□□□□ -2.23
CFT1YDR301W YEL045CP32616 141 aa1.11□□□□□ -2.23
CFT1YDR301W GLC8P41818 229 aa1.11□□□□□ -2.23
CFT1YDR301W SMD1Q02260 146 aaPredicted RBP1.11□□□□□ -2.23
CFT1YDR301W LCL2Q08045 131 aa1.11□□□□□ -2.23
CFT1YDR301W YAL063C-AQ3E791 96 aa1.11□□□□□ -2.23
CFT1YDR301W YNL042W-BQ3E7Z2 85 aa1.11□□□□□ -2.23
CFT1YDR301W RRT15Q3E811 62 aa1.11□□□□□ -2.23
CFT1YDR301W YGR121W-AQ3E816 71 aa1.11□□□□□ -2.23
CFT1YDR301W NHP2P32495 156 aaPredicted RBP1.11□□□□□ -2.23
CFT1YDR301W KNH1P50112 268 aa1.11□□□□□ -2.23
CFT1YDR301W YPR195CQ06594 109 aa1.11□□□□□ -2.23
CFT1YDR301W YBR230W-AQ3E762 66 aa1.11□□□□□ -2.23
CFT1YDR301W YNL198CP40166 100 aa1.1□□□□□ -2.23
CFT1YDR301W GIS2P53849 153 aaKnown RBP RIP-Chip data1.1□□□□□ -2.23not detected
CFT1YDR301W ECM19Q06011 112 aa1.1□□□□□ -2.23
CFT1YDR301W FYV5P25585 152 aa1.1□□□□□ -2.23
CFT1YDR301W MRPL24P36525 258 aaPredicted RBP1.1□□□□□ -2.23
CFT1YDR301W SNA2P56508 79 aa1.1□□□□□ -2.23
CFT1YDR301W TDA8Q6B2U8 126 aa1.1□□□□□ -2.23
CFT1YDR301W YHR125WP38831 101 aa1.1□□□□□ -2.23
CFT1YDR301W COF1Q03048 143 aaKnown RBP1.1□□□□□ -2.23
CFT1YDR301W YAL067W-AQ8TGK6 75 aa1.1□□□□□ -2.23
CFT1YDR301W YBL112CQ3E7Y4 105 aa1.09□□□□□ -2.23
CFT1YDR301W Q0032Q9ZZX7 96 aa1.09□□□□□ -2.23
CFT1YDR301W SLO1Q3E784 85 aa1.09□□□□□ -2.24
CFT1YDR301W HUR1P45820 110 aa1.09□□□□□ -2.24
CFT1YDR301W YJL197C-AP0C5P0 93 aa1.08□□□□□ -2.24
CFT1YDR301W YDR381C-AQ3E6R5 114 aa1.08□□□□□ -2.24
CFT1YDR301W YMR230W-AQ3E7B5 62 aa1.08□□□□□ -2.24
CFT1YDR301W YJL127C-BQ3E828 52 aa1.08□□□□□ -2.24
CFT1YDR301W HYP2P23301 157 aaKnown RBP1.08□□□□□ -2.24
CFT1YDR301W YCR085WP25650 117 aa1.08□□□□□ -2.24
CFT1YDR301W RSM19P53733 91 aaPredicted RBP1.08□□□□□ -2.24
CFT1YDR301W YLR156WP0CE96 114 aa1.08□□□□□ -2.24
CFT1YDR301W YLR159WP0CE97 114 aa1.08□□□□□ -2.24
CFT1YDR301W YLR161WP0CE98 114 aa1.08□□□□□ -2.24
CFT1YDR301W ATP18P81450 59 aa1.08□□□□□ -2.24
CFT1YDR301W DSE2P38844 325 aa1.07□□□□□ -2.24
CFT1YDR301W YOR304C-AO14468 76 aa1.07□□□□□ -2.24
CFT1YDR301W RAD6P06104 172 aa1.07□□□□□ -2.24
CFT1YDR301W DDR2P89113 61 aa1.07□□□□□ -2.24
CFT1YDR301W EMC6Q12431 108 aa1.07□□□□□ -2.24
CFT1YDR301W YJR107C-AP0CT86 78 aa1.06□□□□□ -2.24
CFT1YDR301W COX23P38824 151 aa1.06□□□□□ -2.24
CFT1YDR301W MPC3P53311 146 aa1.06□□□□□ -2.24
CFT1YDR301W YOR072WQ08486 104 aa1.06□□□□□ -2.24
CFT1YDR301W YFR009W-AP0C5M9 85 aa1.06□□□□□ -2.24
CFT1YDR301W KRE1P17260 313 aa1.06□□□□□ -2.24
CFT1YDR301W RPL36BO14455 100 aaKnown RBP1.05□□□□□ -2.24
CFT1YDR301W YOL097W-AQ3E7Y9 61 aa1.05□□□□□ -2.24
CFT1YDR301W YOR268CQ08734 132 aa1.05□□□□□ -2.24
CFT1YDR301W YLR361C-AQ3E795 98 aa1.05□□□□□ -2.24
CFT1YDR301W YLR162WQ06235 118 aa1.05□□□□□ -2.24
CFT1YDR301W KTI11Q3E840 82 aa1.05□□□□□ -2.24
CFT1YDR301W YML100W-AQ8TGT0 57 aa1.05□□□□□ -2.24
CFT1YDR301W RSM18P40033 138 aa1.05□□□□□ -2.24
CFT1YDR301W RPA12P32529 125 aaKnown RBP1.04□□□□□ -2.24
CFT1YDR301W BSC4P53841 131 aa1.04□□□□□ -2.24
CFT1YDR301W YFR032C-BQ8TGU2 87 aa1.04□□□□□ -2.24
CFT1YDR301W YOR034C-AQ3E735 80 aa1.04□□□□□ -2.24
CFT1YDR301W YHR073W-AP0C5N7 58 aa1.04□□□□□ -2.24
CFT1YDR301W LIP1Q03579 150 aa1.04□□□□□ -2.24
CFT1YDR301W RUB1Q03919 77 aa1.04□□□□□ -2.24
CFT1YDR301W YIR021W-AQ3E739 70 aa1.04□□□□□ -2.24
CFT1YDR301W YNL277W-AQ3E7Z0 62 aa1.04□□□□□ -2.24
CFT1YDR301W MIC10Q96VH5 97 aa1.04□□□□□ -2.24
CFT1YDR301W YCR050CP25630 102 aa1.03□□□□□ -2.24
CFT1YDR301W ICS3P47034 131 aa1.03□□□□□ -2.24
CFT1YDR301W YHR007C-AQ07074 71 aa1.03□□□□□ -2.24
CFT1YDR301W YFL041W-AQ3E817 63 aa1.03□□□□□ -2.24
CFT1YDR301W KSH1Q8TGJ3 72 aa1.03□□□□□ -2.24
CFT1YDR301W YHR213W-BQ8TGK1 99 aa1.03□□□□□ -2.24
CFT1YDR301W ATP20Q12233 115 aa1.03□□□□□ -2.25
CFT1YDR301W YOR381W-AQ3E804 55 aa1.03□□□□□ -2.25
CFT1YDR301W ATX1P38636 73 aa1.02□□□□□ -2.25
CFT1YDR301W YJL144WP47009 104 aa1.02□□□□□ -2.25
CFT1YDR301W YOL014WQ08110 124 aa1.02□□□□□ -2.25
CFT1YDR301W YJL133C-AQ3E7A3 74 aa1.02□□□□□ -2.25
CFT1YDR301W YSY6P38374 65 aa1.02□□□□□ -2.25
CFT1YDR301W YGR164WP53291 111 aa1.02□□□□□ -2.25
CFT1YDR301W YLR157W-DP0CE99 70 aa1.02□□□□□ -2.25
CFT1YDR301W YHR139C-AO13536 103 aa1.01□□□□□ -2.25
CFT1YDR301W YBR027CP38220 110 aa1.01□□□□□ -2.25
CFT1YDR301W YHL005CP38752 130 aa1.01□□□□□ -2.25
CFT1YDR301W YDR010CQ12426 110 aa1.01□□□□□ -2.25
CFT1YDR301W DDR48P18899 430 aaKnown RBP1.01□□□□□ -2.25
CFT1YDR301W YHR032W-AP0C5N6 59 aa1.01□□□□□ -2.25
CFT1YDR301W YHL042WP38729 150 aa1.01□□□□□ -2.25
CFT1YDR301W INO4P13902 151 aa1□□□□□ -2.25
CFT1YDR301W TDA2P40045 126 aa1□□□□□ -2.25
CFT1YDR301W YNL122CP53921 115 aaPredicted RBP1□□□□□ -2.25
CFT1YDR301W SBH1P52870 82 aa1□□□□□ -2.25
CFT1YDR301W YGL149WP53116 101 aa1□□□□□ -2.25
CFT1YDR301W CMC4Q3E7A9 73 aa1□□□□□ -2.25
CFT1YDR301W COX7P10174 60 aa0.99□□□□□ -2.25
CFT1YDR301W YHL018WP38744 120 aaPredicted RBP0.99□□□□□ -2.25
CFT1YDR301W RPL36AP05745 100 aaPredicted RBP0.99□□□□□ -2.25
CFT1YDR301W RPL37BP51402 88 aaKnown RBP0.99□□□□□ -2.25
CFT1YDR301W YDL012CQ12489 107 aa0.99□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms