RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C YJL127C-BQ3E828 52 aa1.6□□□□□ -2.15
SSD1YDR293C BET1P22804 142 aa1.6□□□□□ -2.15
SSD1YDR293C DDR2P89113 61 aa1.6□□□□□ -2.15
SSD1YDR293C YBR230W-AQ3E762 66 aa1.6□□□□□ -2.15
SSD1YDR293C YOL085CQ99345 113 aa1.6□□□□□ -2.15
SSD1YDR293C DSE2P38844 325 aa1.59□□□□□ -2.15
SSD1YDR293C YDR029WQ12111 104 aa1.59□□□□□ -2.15
SSD1YDR293C MID2P36027 376 aa1.59□□□□□ -2.15
SSD1YDR293C YKL065W-AQ2V2P2 73 aa1.59□□□□□ -2.15
SSD1YDR293C YNL162W-AQ3E7A8 72 aa1.59□□□□□ -2.15
SSD1YDR293C YAR023CD6VPM8 179 aa1.59□□□□□ -2.16
SSD1YDR293C RPL36BO14455 100 aaKnown RBP1.59□□□□□ -2.16
SSD1YDR293C RPL36AP05745 100 aaPredicted RBP1.59□□□□□ -2.16
SSD1YDR293C YGL193CP53097 103 aa1.59□□□□□ -2.16
SSD1YDR293C TDA8Q6B2U8 126 aa1.59□□□□□ -2.16
SSD1YDR293C YLR156WP0CE96 114 aa1.58□□□□□ -2.16
SSD1YDR293C YLR159WP0CE97 114 aa1.58□□□□□ -2.16
SSD1YDR293C YLR161WP0CE98 114 aa1.58□□□□□ -2.16
SSD1YDR293C YLR157W-DP0CE99 70 aa1.58□□□□□ -2.16
SSD1YDR293C YBR219CP38317 127 aa1.58□□□□□ -2.16
SSD1YDR293C YGR164WP53291 111 aa1.58□□□□□ -2.16
SSD1YDR293C YOL097W-AQ3E7Y9 61 aa1.58□□□□□ -2.16
SSD1YDR293C HUB1Q6Q546 73 aa1.58□□□□□ -2.16
SSD1YDR293C YCR001WP25347 104 aa1.58□□□□□ -2.16
SSD1YDR293C LCL1Q02786 101 aa1.57□□□□□ -2.16
SSD1YDR293C YDR115WQ04598 105 aa1.57□□□□□ -2.16
SSD1YDR293C YDR119W-AQ2V2P9 66 aa1.57□□□□□ -2.16
SSD1YDR293C YLR412C-AQ3E742 68 aa1.57□□□□□ -2.16
SSD1YDR293C YBL112CQ3E7Y4 105 aa1.57□□□□□ -2.16
SSD1YDR293C YGL088WP53151 121 aa1.57□□□□□ -2.16
SSD1YDR293C YOR072WQ08486 104 aa1.57□□□□□ -2.16
SSD1YDR293C YLR285C-AQ3E771 56 aa1.57□□□□□ -2.16
SSD1YDR293C IRA2P19158 3079 aa1.57□□□□□ -2.16
SSD1YDR293C AIM4P38305 123 aaPredicted RBP1.57□□□□□ -2.16
SSD1YDR293C YAL064WP39711 94 aa1.57□□□□□ -2.16
SSD1YDR293C SNA2P56508 79 aa1.57□□□□□ -2.16
SSD1YDR293C SBH1P52870 82 aa1.56□□□□□ -2.16
SSD1YDR293C ICS3P47034 131 aa1.56□□□□□ -2.16
SSD1YDR293C YJR085CP47131 105 aaKnown RBP1.56□□□□□ -2.16
SSD1YDR293C MPC3P53311 146 aa1.56□□□□□ -2.16
SSD1YDR293C YFR009W-AP0C5M9 85 aa1.56□□□□□ -2.16
SSD1YDR293C YHL018WP38744 120 aaPredicted RBP1.56□□□□□ -2.16
SSD1YDR293C YLL066W-BQ8TGJ7 56 aa1.56□□□□□ -2.16
SSD1YDR293C YLR162WQ06235 118 aa1.55□□□□□ -2.16
SSD1YDR293C RSM18P40033 138 aa1.55□□□□□ -2.16
SSD1YDR293C YER187WP40102 141 aa1.55□□□□□ -2.16
SSD1YDR293C YGR025WP53216 100 aa1.55□□□□□ -2.16
SSD1YDR293C YHR213W-BQ8TGK1 99 aa1.55□□□□□ -2.16
SSD1YDR293C YJL133C-AQ3E7A3 74 aa1.55□□□□□ -2.16
SSD1YDR293C LIP1Q03579 150 aa1.54□□□□□ -2.16
SSD1YDR293C CSF1Q12150 2958 aa1.54□□□□□ -2.16
SSD1YDR293C YBR121C-AP0C5L4 52 aa1.54□□□□□ -2.16
SSD1YDR293C BSC4P53841 131 aa1.54□□□□□ -2.16
SSD1YDR293C RPS28BP0C0X0 67 aaKnown RBP1.54□□□□□ -2.16
SSD1YDR293C RPS28AQ3E7X9 67 aaPredicted RBP1.54□□□□□ -2.16
SSD1YDR293C IGD1P43598 195 aa1.53□□□□□ -2.16
SSD1YDR293C URA2P07259 2214 aaKnown RBP1.53□□□□□ -2.16
SSD1YDR293C YHR073W-AP0C5N7 58 aa1.53□□□□□ -2.16
SSD1YDR293C YDR034C-AP0C289 58 aa1.53□□□□□ -2.17
SSD1YDR293C RPL38P49167 78 aaKnown RBP1.53□□□□□ -2.17
SSD1YDR293C MIC10Q96VH5 97 aa1.53□□□□□ -2.17
SSD1YDR293C SDH6Q3E785 79 aa1.52□□□□□ -2.17
SSD1YDR293C COX7P10174 60 aa1.52□□□□□ -2.17
SSD1YDR293C YEL045CP32616 141 aa1.52□□□□□ -2.17
SSD1YDR293C YPR153WQ06537 140 aa1.52□□□□□ -2.17
SSD1YDR293C YLR361C-AQ3E795 98 aa1.52□□□□□ -2.17
SSD1YDR293C FMP27Q06179 2628 aa1.52□□□□□ -2.17
SSD1YDR293C DDR48P18899 430 aaKnown RBP1.52□□□□□ -2.17
SSD1YDR293C BPH1P25356 2167 aa1.51□□□□□ -2.17
SSD1YDR293C YNL184CP53876 108 aa1.51□□□□□ -2.17
SSD1YDR293C KSH1Q8TGJ3 72 aa1.51□□□□□ -2.17
SSD1YDR293C TOR2P32600 2474 aaKnown RBP1.51□□□□□ -2.17
SSD1YDR293C TOR1P35169 2470 aa1.51□□□□□ -2.17
SSD1YDR293C YOL013W-AP0C272 63 aaPredicted RBP1.51□□□□□ -2.17
SSD1YDR293C YHL005CP38752 130 aa1.51□□□□□ -2.17
SSD1YDR293C YBL081WP38180 368 aaKnown RBP1.5□□□□□ -2.17
SSD1YDR293C YAR064WP39563 99 aa1.5□□□□□ -2.17
SSD1YDR293C AUA1P32450 94 aa1.5□□□□□ -2.17
SSD1YDR293C YHR007C-AQ07074 71 aa1.5□□□□□ -2.17
SSD1YDR293C OST5Q92316 86 aa1.49□□□□□ -2.17
SSD1YDR293C YJL197C-AP0C5P0 93 aa1.49□□□□□ -2.17
SSD1YDR293C GCN1P33892 2672 aaKnown RBP1.48□□□□□ -2.17
SSD1YDR293C YOR034C-AQ3E735 80 aa1.48□□□□□ -2.17
SSD1YDR293C NOP10Q6Q547 58 aaPredicted RBP1.48□□□□□ -2.17
SSD1YDR293C YOL166W-AQ8TGJ1 51 aa1.48□□□□□ -2.17
SSD1YDR293C YBR056W-AI2HB52 66 aa1.48□□□□□ -2.17
SSD1YDR293C HHF1P02309 103 aaKnown RBP1.48□□□□□ -2.17
SSD1YDR293C YDR246W-AQ3E763 66 aa1.48□□□□□ -2.17
SSD1YDR293C YCR043CP25361 127 aa1.48□□□□□ -2.17
SSD1YDR293C YHR125WP38831 101 aa1.48□□□□□ -2.17
SSD1YDR293C MMS2P53152 137 aa1.48□□□□□ -2.17
SSD1YDR293C YIL102CP40488 101 aa1.47□□□□□ -2.17
SSD1YDR293C MDN1Q12019 4910 aaKnown RBP1.47□□□□□ -2.17
SSD1YDR293C YLR255CO13574 117 aa1.47□□□□□ -2.17
SSD1YDR293C YOR268CQ08734 132 aa1.47□□□□□ -2.17
SSD1YDR293C EDC1P53080 175 aaPredicted RBP1.46□□□□□ -2.18
SSD1YDR293C GIS2P53849 153 aaKnown RBP RIP-Chip data1.46□□□□□ -2.18not detected
SSD1YDR293C MRX7P53869 86 aa1.46□□□□□ -2.18
SSD1YDR293C YNL277W-AQ3E7Z0 62 aa1.46□□□□□ -2.18
SSD1YDR293C RRT15Q3E811 62 aa1.46□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 17 ms