RNA–Protein interactions for RNA: YBR260C

RGD1, Transcript of GTPase-activating protein (RhoGAP) for Rho3p and Rho4p, yeastyeast

Gene RGD1, Length 2,001 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD1YBR260C YIL102CP40488 101 aa4.44□□□□□ -1.7
RGD1YBR260C YMR122W-AQ3E842 84 aa4.44□□□□□ -1.7
RGD1YBR260C YKL065W-AQ2V2P2 73 aa4.43□□□□□ -1.7
RGD1YBR260C YPS5P53057 165 aa4.43□□□□□ -1.7
RGD1YBR260C TSC3Q3E790 80 aa4.43□□□□□ -1.7
RGD1YBR260C LIP1Q03579 150 aa4.41□□□□□ -1.7
RGD1YBR260C YDR010CQ12426 110 aa4.41□□□□□ -1.7
RGD1YBR260C YNL146C-AQ3E7Z1 64 aa4.41□□□□□ -1.7
RGD1YBR260C YAL064WP39711 94 aa4.41□□□□□ -1.7
RGD1YBR260C YMR244WQ04018 355 aa4.41□□□□□ -1.7
RGD1YBR260C CSF1Q12150 2958 aa4.41□□□□□ -1.7
RGD1YBR260C PMP3P87284 55 aa4.4□□□□□ -1.7
RGD1YBR260C SPO24Q3E752 67 aa4.4□□□□□ -1.7
RGD1YBR260C HFA1P32874 2273 aa4.4□□□□□ -1.71
RGD1YBR260C YPR010C-AA5Z2X5 72 aa4.39□□□□□ -1.71
RGD1YBR260C YIL156W-BQ2V2P4 73 aa4.36□□□□□ -1.71
RGD1YBR260C SPC1P46965 94 aa4.36□□□□□ -1.71
RGD1YBR260C MRPS8Q03799 155 aa4.36□□□□□ -1.71
RGD1YBR260C COX23P38824 151 aa4.35□□□□□ -1.71
RGD1YBR260C YHR213W-BQ8TGK1 99 aa4.35□□□□□ -1.71
RGD1YBR260C YBR126W-AQ8TGU7 68 aa4.35□□□□□ -1.71
RGD1YBR260C RPS11AP0CX47 156 aaKnown RBP4.34□□□□□ -1.71
RGD1YBR260C RPS11BP0CX48 156 aaKnown RBP4.34□□□□□ -1.71
RGD1YBR260C RPB10P22139 70 aa4.34□□□□□ -1.71
RGD1YBR260C YER145C-AA0A023PYF4 145 aa4.34□□□□□ -1.71
RGD1YBR260C EDC2P40023 145 aaPredicted RBP4.33□□□□□ -1.72
RGD1YBR260C YGL193CP53097 103 aa4.33□□□□□ -1.72
RGD1YBR260C DDR48P18899 430 aaKnown RBP4.33□□□□□ -1.72
RGD1YBR260C FYV5P25585 152 aa4.33□□□□□ -1.72
RGD1YBR260C RPL29P05747 59 aaPredicted RBP4.32□□□□□ -1.72
RGD1YBR260C MVB12P42939 101 aa4.32□□□□□ -1.72
RGD1YBR260C YCR095W-AQ3E787 52 aa4.32□□□□□ -1.72
RGD1YBR260C URA2P07259 2214 aaKnown RBP4.32□□□□□ -1.72
RGD1YBR260C YJL133C-AQ3E7A3 74 aa4.31□□□□□ -1.72
RGD1YBR260C YNL162W-AQ3E7A8 72 aa4.31□□□□□ -1.72
RGD1YBR260C YOL013W-AP0C272 63 aaPredicted RBP4.31□□□□□ -1.72
RGD1YBR260C YAR023CD6VPM8 179 aa4.3□□□□□ -1.72
RGD1YBR260C TAO3P40468 2376 aa4.3□□□□□ -1.72
RGD1YBR260C TAR1Q8TGM6 124 aa4.29□□□□□ -1.72
RGD1YBR260C YLR157W-DP0CE99 70 aa4.29□□□□□ -1.72
RGD1YBR260C YNL042W-BQ3E7Z2 85 aa4.29□□□□□ -1.72
RGD1YBR260C YBR230W-AQ3E762 66 aa4.28□□□□□ -1.72
RGD1YBR260C YJL127C-BQ3E828 52 aa4.27□□□□□ -1.73
RGD1YBR260C IRA1P18963 3092 aa4.27□□□□□ -1.73
RGD1YBR260C AQY2P0CD90 149 aa4.26□□□□□ -1.73
RGD1YBR260C SPG1P50088 95 aa4.26□□□□□ -1.73
RGD1YBR260C SDH6Q3E785 79 aa4.26□□□□□ -1.73
RGD1YBR260C HUB1Q6Q546 73 aa4.26□□□□□ -1.73
RGD1YBR260C YMR001C-AQ8TGS9 76 aa4.26□□□□□ -1.73
RGD1YBR260C IGD1P43598 195 aa4.25□□□□□ -1.73
RGD1YBR260C TRA1P38811 3744 aa4.25□□□□□ -1.73
RGD1YBR260C ECM19Q06011 112 aa4.24□□□□□ -1.73
RGD1YBR260C HOR7Q05827 59 aa4.22□□□□□ -1.73
RGD1YBR260C YBL039W-BP0C268 59 aa4.22□□□□□ -1.73
RGD1YBR260C YHR125WP38831 101 aa4.22□□□□□ -1.73
RGD1YBR260C YDL241WQ07738 123 aa4.21□□□□□ -1.74
RGD1YBR260C AUA1P32450 94 aa4.19□□□□□ -1.74
RGD1YBR260C QCR10P37299 77 aa4.19□□□□□ -1.74
RGD1YBR260C LCL2Q08045 131 aa4.19□□□□□ -1.74
RGD1YBR260C GCN1P33892 2672 aaKnown RBP4.19□□□□□ -1.74
RGD1YBR260C TMC1Q08422 150 aaPredicted RBP4.19□□□□□ -1.74
RGD1YBR260C YCR001WP25347 104 aa4.18□□□□□ -1.74
RGD1YBR260C YBR027CP38220 110 aa4.18□□□□□ -1.74
RGD1YBR260C RPC10P40422 70 aa4.18□□□□□ -1.74
RGD1YBR260C YAR064WP39563 99 aa4.17□□□□□ -1.74
RGD1YBR260C YLR307C-AQ3E825 87 aa4.17□□□□□ -1.74
RGD1YBR260C YGL149WP53116 101 aa4.17□□□□□ -1.74
RGD1YBR260C MRX7P53869 86 aa4.17□□□□□ -1.74
RGD1YBR260C YNL122CP53921 115 aaPredicted RBP4.17□□□□□ -1.74
RGD1YBR260C ATP17Q06405 101 aa4.17□□□□□ -1.74
RGD1YBR260C FMP27Q06179 2628 aa4.17□□□□□ -1.74
RGD1YBR260C YHR007C-AQ07074 71 aa4.16□□□□□ -1.74
RGD1YBR260C BSC4P53841 131 aa4.16□□□□□ -1.74
RGD1YBR260C YDR034W-BQ6Q5X2 51 aa4.16□□□□□ -1.74
RGD1YBR260C COX17Q12287 69 aa4.15□□□□□ -1.75
RGD1YBR260C YCR043CP25361 127 aa4.13□□□□□ -1.75
RGD1YBR260C YGR240C-AQ3E786 66 aa4.13□□□□□ -1.75
RGD1YBR260C Q0032Q9ZZX7 96 aa4.13□□□□□ -1.75
RGD1YBR260C RDS3Q06835 107 aaPredicted RBP4.12□□□□□ -1.75
RGD1YBR260C SNA2P56508 79 aa4.11□□□□□ -1.75
RGD1YBR260C SOM1Q05676 74 aa4.11□□□□□ -1.75
RGD1YBR260C YCR041WP37265 110 aa4.11□□□□□ -1.75
RGD1YBR260C DDR2P89113 61 aa4.11□□□□□ -1.75
RGD1YBR260C FYV12Q08559 129 aa4.11□□□□□ -1.75
RGD1YBR260C YOR072WQ08486 104 aa4.09□□□□□ -1.75
RGD1YBR260C YFR032C-BQ8TGU2 87 aa4.09□□□□□ -1.75
RGD1YBR260C YGL260WP53056 76 aa4.09□□□□□ -1.76
RGD1YBR260C GIS2P53849 153 aaKnown RBP RIP-Chip data4.09□□□□□ -1.76not detected
RGD1YBR260C YMR230W-AQ3E7B5 62 aa4.09□□□□□ -1.76
RGD1YBR260C RPL33AP05744 107 aaKnown RBP4.07□□□□□ -1.76
RGD1YBR260C RPL33BP41056 107 aaKnown RBP4.07□□□□□ -1.76
RGD1YBR260C YPL278CQ08990 100 aa4.07□□□□□ -1.76
RGD1YBR260C YBR182C-AQ8TGU6 64 aa4.07□□□□□ -1.76
RGD1YBR260C YDR115WQ04598 105 aa4.06□□□□□ -1.76
RGD1YBR260C YJL197C-AP0C5P0 93 aa4.05□□□□□ -1.76
RGD1YBR260C YDL012CQ12489 107 aa4.04□□□□□ -1.76
RGD1YBR260C YHR212W-AP0CX91 67 aa4.04□□□□□ -1.76
RGD1YBR260C YPR117WQ06116 2489 aa4.03□□□□□ -1.76
RGD1YBR260C YGL014C-AP0C5N1 53 aa4.03□□□□□ -1.76
RGD1YBR260C SGF11Q03067 99 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms