RNA–Protein interactions for RNA: YBR194W

AIM4, Transcript of Protein proposed to be associated with the nuclear pore complex, yeast

Gene AIM4, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AIM4	YBR194W	RIM15	P43565	1770 aa		1.03	□□□□□ -2.24
AIM4	YBR194W	NHP2	P32495	156 aa	Predicted RBP	1.03	□□□□□ -2.24
AIM4	YBR194W	UTP10	P42945	1769 aa	Known RBP	1.03	□□□□□ -2.24
AIM4	YBR194W	PDX3	P38075	228 aa	Known RBP	1.02	□□□□□ -2.25
AIM4	YBR194W	SCP1	Q08873	200 aa		1.02	□□□□□ -2.25
AIM4	YBR194W	YOL164W-A	Q3E7A5	60 aa		1.02	□□□□□ -2.25
AIM4	YBR194W	BRR2	P32639	2163 aa	Known RBP	1.01	□□□□□ -2.25
AIM4	YBR194W	RPA12	P32529	125 aa	Known RBP	0.99	□□□□□ -2.25
AIM4	YBR194W	YNL042W-B	Q3E7Z2	85 aa		0.99	□□□□□ -2.25
AIM4	YBR194W	URA2	P07259	2214 aa	Known RBP	0.99	□□□□□ -2.25
AIM4	YBR194W	PMD1	P32634	1753 aa		0.98	□□□□□ -2.25
AIM4	YBR194W	YHR214C-D	P0CX93	97 aa		0.98	□□□□□ -2.25
AIM4	YBR194W	Q0032	Q9ZZX7	96 aa		0.98	□□□□□ -2.25
AIM4	YBR194W	HKR1	P41809	1802 aa		0.97	□□□□□ -2.25
AIM4	YBR194W	COX7	P10174	60 aa		0.97	□□□□□ -2.25
AIM4	YBR194W	RPL38	P49167	78 aa	Known RBP	0.97	□□□□□ -2.25
AIM4	YBR194W	FPR2	P32472	135 aa		0.96	□□□□□ -2.26
AIM4	YBR194W	FAS2	P19097	1887 aa	Known RBP	0.95	□□□□□ -2.26
AIM4	YBR194W	YNL198C	P40166	100 aa		0.95	□□□□□ -2.26
AIM4	YBR194W	RPC10	P40422	70 aa		0.95	□□□□□ -2.26
AIM4	YBR194W	RPS29B	P41058	56 aa	Known RBP	0.95	□□□□□ -2.26
AIM4	YBR194W	YBR201C-A	Q2V2Q3	67 aa		0.95	□□□□□ -2.26
AIM4	YBR194W	FIG2	P25653	1609 aa		0.95	□□□□□ -2.26
AIM4	YBR194W	POL2	P21951	2222 aa	Known RBP	0.95	□□□□□ -2.26
AIM4	YBR194W	TOM6	P33448	61 aa		0.94	□□□□□ -2.26
AIM4	YBR194W	CWP2	P43497	92 aa		0.94	□□□□□ -2.26
AIM4	YBR194W	YOR343C	Q12484	108 aa		0.94	□□□□□ -2.26
AIM4	YBR194W	YMR175W-A	Q3E766	64 aa		0.94	□□□□□ -2.26
AIM4	YBR194W	PAU23	Q07987	124 aa		0.93	□□□□□ -2.26
AIM4	YBR194W	PAU17	Q12370	124 aa		0.93	□□□□□ -2.26
AIM4	YBR194W	YKL068W-A	Q3E826	78 aa		0.93	□□□□□ -2.26
AIM4	YBR194W	YAL065C	O13511	128 aa		0.92	□□□□□ -2.26
AIM4	YBR194W	YJR107C-A	P0CT86	78 aa		0.92	□□□□□ -2.26
AIM4	YBR194W	YNL190W	P53872	204 aa		0.92	□□□□□ -2.26
AIM4	YBR194W	FLO1	P32768	1537 aa		0.92	□□□□□ -2.26
AIM4	YBR194W	TOM1	Q03280	3268 aa		0.91	□□□□□ -2.26
AIM4	YBR194W	YMR122W-A	Q3E842	84 aa		0.91	□□□□□ -2.26
AIM4	YBR194W	YCR085W	P25650	117 aa		0.9	□□□□□ -2.27
AIM4	YBR194W	ATP18	P81450	59 aa		0.9	□□□□□ -2.27
AIM4	YBR194W	YOR105W	Q08504	108 aa		0.9	□□□□□ -2.27
AIM4	YBR194W	ECM29	P38737	1868 aa		0.89	□□□□□ -2.27
AIM4	YBR194W	ATX1	P38636	73 aa		0.89	□□□□□ -2.27
AIM4	YBR194W	MOT1	P32333	1867 aa		0.88	□□□□□ -2.27
AIM4	YBR194W	BLM10	P43583	2143 aa		0.88	□□□□□ -2.27
AIM4	YBR194W	VPS13	Q07878	3144 aa		0.88	□□□□□ -2.27
AIM4	YBR194W	SDH6	Q3E785	79 aa		0.88	□□□□□ -2.27
AIM4	YBR194W	POC4	Q12245	148 aa	Predicted RBP	0.87	□□□□□ -2.27
AIM4	YBR194W	NOP10	Q6Q547	58 aa	Predicted RBP	0.87	□□□□□ -2.27
AIM4	YBR194W	PRP8	P33334	2413 aa	Known RBP	0.86	□□□□□ -2.27
AIM4	YBR194W	YKL065W-A	Q2V2P2	73 aa		0.86	□□□□□ -2.27
AIM4	YBR194W	YPR145C-A	Q2V2P0	78 aa		0.85	□□□□□ -2.27
AIM4	YBR194W	SGF11	Q03067	99 aa		0.84	□□□□□ -2.27
AIM4	YBR194W	YOL097W-A	Q3E7Y9	61 aa		0.84	□□□□□ -2.27
AIM4	YBR194W	YIL134C-A	Q45U18	67 aa		0.84	□□□□□ -2.27
AIM4	YBR194W	YFR009W-A	P0C5M9	85 aa		0.83	□□□□□ -2.28
AIM4	YBR194W	YOR314W	Q12506	109 aa		0.83	□□□□□ -2.28
AIM4	YBR194W	YIL156W-B	Q2V2P4	73 aa		0.83	□□□□□ -2.28
AIM4	YBR194W	YDR381C-A	Q3E6R5	114 aa		0.83	□□□□□ -2.28
AIM4	YBR194W	YPR108W-A	Q3E7B3	70 aa		0.82	□□□□□ -2.28
AIM4	YBR194W	YBR016W	P38216	128 aa		0.79	□□□□□ -2.28
AIM4	YBR194W	STT4	P37297	1900 aa		0.78	□□□□□ -2.28
AIM4	YBR194W	YBR032W	P38223	100 aa		0.78	□□□□□ -2.28
AIM4	YBR194W	SWM2	P40342	146 aa		0.78	□□□□□ -2.28
AIM4	YBR194W	YDR034W-B	Q6Q5X2	51 aa		0.78	□□□□□ -2.28
AIM4	YBR194W	TAO3	P40468	2376 aa		0.77	□□□□□ -2.29
AIM4	YBR194W	YPR117W	Q06116	2489 aa		0.77	□□□□□ -2.29
AIM4	YBR194W	QCR9	P22289	66 aa		0.77	□□□□□ -2.29
AIM4	YBR194W	EDC1	P53080	175 aa	Predicted RBP	0.76	□□□□□ -2.29
AIM4	YBR194W	YDR524C-B	Q3E6R4	66 aa		0.75	□□□□□ -2.29
AIM4	YBR194W	IRA2	P19158	3079 aa		0.75	□□□□□ -2.29
AIM4	YBR194W	LSM2	P38203	95 aa	Known RBP	0.74	□□□□□ -2.29
AIM4	YBR194W	IRA1	P18963	3092 aa		0.74	□□□□□ -2.29
AIM4	YBR194W	CSF1	Q12150	2958 aa		0.74	□□□□□ -2.29
AIM4	YBR194W	YGR121W-A	Q3E816	71 aa		0.73	□□□□□ -2.29
AIM4	YBR194W	YHR213W-A	Q8TGT4	77 aa		0.73	□□□□□ -2.29
AIM4	YBR194W	FMP27	Q06179	2628 aa		0.73	□□□□□ -2.29
AIM4	YBR194W	TOR2	P32600	2474 aa	Known RBP	0.72	□□□□□ -2.29
AIM4	YBR194W	YDL022C-A	P0C5L6	82 aa		0.72	□□□□□ -2.29
AIM4	YBR194W	YDR119W-A	Q2V2P9	66 aa		0.72	□□□□□ -2.29
AIM4	YBR194W	YBR056W-A	I2HB52	66 aa		0.71	□□□□□ -2.3
AIM4	YBR194W	TRA1	P38811	3744 aa		0.69	□□□□□ -2.3
AIM4	YBR194W	ATP17	Q06405	101 aa		0.69	□□□□□ -2.3
AIM4	YBR194W	YKL018C-A	Q3E7A7	99 aa		0.69	□□□□□ -2.3
AIM4	YBR194W	TEL1	P38110	2787 aa		0.68	□□□□□ -2.3
AIM4	YBR194W	SEN1	Q00416	2231 aa	Known RBP	0.68	□□□□□ -2.3
AIM4	YBR194W	PAU7	P39545	55 aa		0.68	□□□□□ -2.3
AIM4	YBR194W	SMX2	P40204	77 aa	Known RBP	0.68	□□□□□ -2.3
AIM4	YBR194W	YGR025W	P53216	100 aa		0.68	□□□□□ -2.3
AIM4	YBR194W	YGR035W-A	Q45U48	73 aa		0.68	□□□□□ -2.3
AIM4	YBR194W	TIM12	P32830	109 aa		0.67	□□□□□ -2.3
AIM4	YBR194W	YLR146W-A	Q2V2P1	62 aa		0.67	□□□□□ -2.3
AIM4	YBR194W	TOR1	P35169	2470 aa		0.67	□□□□□ -2.3
AIM4	YBR194W	YIL046W-A	Q3E7Z4	54 aa		0.66	□□□□□ -2.3
AIM4	YBR194W	GCN1	P33892	2672 aa	Known RBP	0.65	□□□□□ -2.3
AIM4	YBR194W	PAI3	P01094	68 aa		0.65	□□□□□ -2.31
AIM4	YBR194W	YOL131W	Q08270	108 aa		0.65	□□□□□ -2.31
AIM4	YBR194W	MEC1	P38111	2368 aa		0.64	□□□□□ -2.31
AIM4	YBR194W	NUM1	Q00402	2748 aa		0.64	□□□□□ -2.31
AIM4	YBR194W	CUP1-1	P0CX80	61 aa		0.63	□□□□□ -2.31
AIM4	YBR194W	CUP1-2	P0CX81	61 aa		0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms