RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 BAG1Q99933 345 aaPredicted RBP9.96□□□□□ -0.82
PHGDH-228ENST00000641847 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 GPR62Q9BZJ7 368 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 DNAI2Q9GZS0 605 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 KCNF1Q9H3M0 494 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 DPEP3Q9H4B8 488 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 HAUS4Q9H6D7 363 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 RXFP1Q9HBX9 757 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 ACP6Q9NPH0 428 aa9.96□□□□□ -0.82
PHGDH-228ENST00000641847 WDFY3Q8IZQ1 3526 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 FLNBO75369 2602 aaKnown RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 MAN2B1O00754 1011 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 GABRDO14764 452 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 THAP12O43422 761 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 TGM5O43548 720 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 NRDCO43847 1150 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 XYLBO75191 536 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 PAPLNO95428 1278 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 EFEMP2O95967 443 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 PLEKP08567 350 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 PDGFRBP09619 1106 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 FAM163BP0C2L3 166 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 CD19P15391 556 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 BRD2P25440 801 aaKnown RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 LMO2P25791 158 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 LHX1P48742 406 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 BPIFB4P59827 614 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 PSMC1P62191 440 aaKnown RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 CCZ1BP86790 482 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 CCZ1P86791 482 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 CDK17Q00537 523 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 PTK2Q05397 1052 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 RTP2Q5QGT7 225 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 TAF3Q5VWG9 929 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 ZNF280DQ6N043 979 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 ACOT1Q86TX2 421 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 NOP9Q86U38 636 aaKnown RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 CEP57Q86XR8 500 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 TMTC1Q8IUR5 882 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 RNF168Q8IYW5 571 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 B3GALNT2Q8NCR0 500 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 ST13P5Q8NFI4 369 aaPredicted RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 TMEM176AQ96HP8 235 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 CHP1Q99653 195 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 SYT15Q9BQS2 421 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 TTPALQ9BTX7 342 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 DEF6Q9H4E7 631 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 ARHGAP20Q9P2F6 1191 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 NOCTQ9UK39 431 aaKnown RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 ZMIZ1Q9ULJ6 1067 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 BZW2Q9Y6E2 419 aaKnown RBP9.95□□□□□ -0.82
PHGDH-228ENST00000641847 DMXL2Q8TDJ6 3036 aa9.95□□□□□ -0.82
PHGDH-228ENST00000641847 TMEM8BA6NDV4 472 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 SOWAHDA6NJG2 315 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 ZMYND10O75800 440 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 OAZ2O95190 189 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 HNRNPA1P09651 372 aaKnown RBP eCLIP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 TARSP26639 723 aaKnown RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 PCSK1P29120 753 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 EIF4A3P38919 411 aaKnown RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 LIMK1P53667 647 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 CDR2Q01850 454 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 DSG1Q02413 1049 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 CCDC142Q17RM4 750 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 USP41Q3LFD5 358 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 SGO2Q562F6 1265 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 MDH1BQ5I0G3 518 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 INTS6LQ5JSJ4 861 aaKnown RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 UNQ6494/PRO21346Q6UXR6 183 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 MAMSTRQ6ZN01 415 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 TAS1R1Q7RTX1 841 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 ZNF571Q7Z3V5 609 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 GRASPQ7Z6J2 395 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 GPR65Q8IYL9 337 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 THEM5Q8N1Q8 247 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 OR10T2Q8NGX3 314 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 OLIG1Q8TAK6 271 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 FGF13Q92913 245 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 TNIP3Q96KP6 325 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 HEXIM2Q96MH2 286 aaKnown RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 ZNF830Q96NB3 372 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 AGPAT1Q99943 283 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 RPP25Q9BUL9 199 aaKnown RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 NHEJ1Q9H9Q4 299 aaPredicted RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 FAM49BQ9NUQ9 324 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 SEPT11Q9NVA2 429 aaKnown RBP9.94□□□□□ -0.82
PHGDH-228ENST00000641847 CDH9Q9ULB4 789 aa9.94□□□□□ -0.82
PHGDH-228ENST00000641847 SSU72P8A0A1W2PR75 194 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 H7C4K7 107 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ARHGAP6O43182 974 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 MED7O43513 233 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 GDF9O60383 454 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ATP2C2O75185 946 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 MMEP08473 750 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 VDRP11473 427 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CCDC130P13994 396 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 HOXB3P14651 431 aaPredicted RBP9.93□□□□□ -0.82
PHGDH-228ENST00000641847 CHRNB2P17787 502 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 ANXA13P27216 316 aa9.93□□□□□ -0.82
PHGDH-228ENST00000641847 KIF11P52732 1056 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms