RNA–Protein interactions for RNA: ENST00000640483.1

CACNA1D-230, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

APPRIS ALT2 TSL 5

Gene CACNA1D, Length 5,673 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-230ENST00000640483 SUSD6Q92537 303 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 APBB2Q92870 758 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CAMKK2Q96RR4 588 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 PITPNM3Q9BZ71 974 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 GOLPH3Q9H4A6 298 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 COPS7BQ9H9Q2 264 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 FAM208AQ9UK61 1670 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 PMPCBO75439 489 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 LSM8O95777 96 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 LSP1P33241 339 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 SPRP35270 261 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 THOP1P52888 689 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CAMK2GQ13555 558 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 MYBPC2Q14324 1141 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 TOMM20Q15388 145 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 MRNIPQ6NTE8 343 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CERS5Q8N5B7 392 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 USP38Q8NB14 1042 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 BTBD6Q96KE9 485 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 OSBPL8Q9BZF1 889 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 NMRK2Q9NPI5 230 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 ZSCAN32Q9NX65 697 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 TRMT6Q9UJA5 497 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 RUVBL2Q9Y230 463 aaKnown RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 A0A1B0GTH6 734 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 DIAPH2O60879 1101 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 ENDOD1O94919 500 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 EPB42P16452 691 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 GRK3P35626 688 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 TP53BP2Q13625 1128 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 KRT72Q14CN4 511 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 TREML2Q5T2D2 321 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 ARMC2Q8NEN0 867 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 SLC20A1Q8WUM9 679 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 PPP1R16AQ96I34 528 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 SMPD4Q9NXE4 827 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 PHF20L1A8MW92 1017 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CTDNEP1O95476 244 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CRTAMO95727 393 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 GNSP15586 552 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 AARSP49588 968 aaKnown RBP eCLIP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 SKP1P63208 163 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 HPCAP84074 193 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 SLC9A5Q14940 896 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CRY2Q49AN0 593 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 FAM172AQ8WUF8 416 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 SYN2Q92777 582 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 UPF1Q92900 1129 aaKnown RBP eCLIP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 COPS5Q92905 334 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 GAD1Q99259 594 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 FRMD8P1Q9BZ68 369 aaPredicted RBP9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 LNPEPQ9UIQ6 1025 aa9.68□□□□□ -0.86
CACNA1D-230ENST00000640483 TBC1D3BA6NDS4 549 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 IFRD1O00458 451 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 TSPAN3O60637 253 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 CYP2A6P11509 494 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 PBLDP30039 288 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 MLH1P40692 756 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 SCNN1GP51170 649 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ABCE1P61221 599 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 TGM3Q08188 693 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 STAT4Q14765 748 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 RD3Q7Z3Z2 195 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 TACO1Q9BSH4 297 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 OSGEPL1Q9H4B0 414 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 KIF17Q9P2E2 1029 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ADGRG1Q9Y653 693 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 A0A1B0GUA9 196 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 LACTBL1A8MY62 500 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ONECUT3O60422 494 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 SPAG6O75602 509 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 CYP3A4P08684 503 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 RARRES1P49788 294 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ITGA7Q13683 1181 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 SUZ12Q15022 739 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 PLPPR4Q7Z2D5 763 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 GAS2L3Q86XJ1 694 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ANKS1AQ92625 1134 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 HES6Q96HZ4 224 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 PARD6BQ9BYG5 372 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 RASSF4Q9H2L5 321 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 NMRK1Q9NWW6 199 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ATMINO43313 823 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 PSTPIP1O43586 416 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 SRP72O76094 671 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 SEC31AO94979 1220 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 FGF19O95750 216 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 IGSF6O95976 241 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ALPPL2P10696 532 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 STMN1P16949 149 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 LAG3P18627 525 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 TNNI3P19429 210 aa9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 SP100P23497 879 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 ACAT1P24752 427 aaKnown RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 CRYBB1P53674 252 aaPredicted RBP9.67□□□□□ -0.86
CACNA1D-230ENST00000640483 FMR1Q06787 632 aaKnown RBP eCLIP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms