RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 MAB21L3Q8N8X9 362 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 OLIG1Q8TAK6 271 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 HSFY1Q96LI6 401 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 NECAB3Q96P71 396 aaPredicted RBP13.9□□□□□ -0.18
GTF3A-209ENST00000640289 CPXM1Q96SM3 734 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 PCDHB18PQ96TA0 734 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 AGPAT1Q99943 283 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 SLC4A5Q9BY07 1137 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 SLC46A2Q9BY10 475 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 SLITRK6Q9H5Y7 841 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 HAUS4Q9H6D7 363 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 NMUR1Q9HB89 426 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 TRPC7Q9HCX4 862 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 AIPL1Q9NZN9 384 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 SCML2Q9UQR0 700 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 USTQ9Y2C2 406 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 NR2E1Q9Y466 385 aa13.9□□□□□ -0.18
GTF3A-209ENST00000640289 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 DENND4AQ7Z401 1863 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 A0A1W2PQH9 124 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 ZNF840PA6NDX5 716 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 LOC730098B7Z3J9 87 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 E5RJQ4 531 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 ZBED1O96006 694 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 ZDHHC11BP0C7U3 371 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 CCDC172P0C7W6 258 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 RPL34P49207 117 aaKnown RBP13.89□□□□□ -0.19
GTF3A-209ENST00000640289 ADKP55263 362 aaKnown RBP13.89□□□□□ -0.19
GTF3A-209ENST00000640289 TBX2Q13207 712 aaPredicted RBP13.89□□□□□ -0.19
GTF3A-209ENST00000640289 TRIM14Q14142 442 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 PTPN20Q4JDL3 420 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 ARHGAP15Q53QZ3 475 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 BHLHA9Q7RTU4 235 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 CCDC186Q7Z3E2 898 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 SIX6OS1Q8N1H7 587 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 TMEM35BQ8NCS4 154 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 PDZD8Q8NEN9 1154 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 ZNF397Q8NF99 534 aaPredicted RBP13.89□□□□□ -0.19
GTF3A-209ENST00000640289 STK32AQ8WU08 396 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 CPA5Q8WXQ8 436 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 OVCA2Q8WZ82 227 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 MRPS31Q92665 395 aaKnown RBP13.89□□□□□ -0.19
GTF3A-209ENST00000640289 ACSF2Q96CM8 615 aaPredicted RBP13.89□□□□□ -0.19
GTF3A-209ENST00000640289 SLC22A12Q96S37 553 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 CYP2S1Q96SQ9 504 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 SYT11Q9BT88 431 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 MIS12Q9H081 205 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 TASP1Q9H6P5 420 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 OSER1Q9NX31 292 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 GDE1Q9NZC3 331 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 EPS15L1Q9UBC2 864 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 PRKAG3Q9UGI9 489 aa13.89□□□□□ -0.19
GTF3A-209ENST00000640289 MFAP3LO75121 409 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 ADCY5O95622 1261 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 ERBB2P04626 1255 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 CYP1A1P04798 512 aaPredicted RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 CDH5P33151 784 aaPredicted RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 PRKCIP41743 596 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 PPP3CCP48454 512 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 DAOAP59103 153 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 NOMO3P69849 1222 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 KLHL30Q0D2K2 578 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 FAM78AQ5JUQ0 283 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 NAA35Q5VZE5 725 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 HGSNATQ68CP4 663 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 PM20D1Q6GTS8 502 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 PARM1Q6UWI2 310 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 HFE2Q6ZVN8 426 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 ZNF571Q7Z3V5 609 aaPredicted RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 SCD5Q86SK9 330 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 TMEM110Q86TL2 294 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 MON1AQ86VX9 555 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 FMNL3Q8IVF7 1028 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 ARL14EPQ8N8R7 260 aaPredicted RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 ZSCAN18Q8TBC5 510 aaPredicted RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 PPP1R13BQ96KQ4 1090 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 SMG9Q9H0W8 520 aaKnown RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 NUCKS1Q9H1E3 243 aaKnown RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 CCSER2Q9H7U1 834 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 TLR8Q9NR97 1041 aaKnown RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 SEPT11Q9NVA2 429 aaKnown RBP13.88□□□□□ -0.19
GTF3A-209ENST00000640289 LIMD1Q9UGP4 676 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 NAGPAQ9UK23 515 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 NUDT5Q9UKK9 219 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 CEP83Q9Y592 693 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 DOCK6Q96HP0 2047 aa13.88□□□□□ -0.19
GTF3A-209ENST00000640289 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 YJEFN3A6XGL0 299 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 E7ENQ6 273 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 PAPSS1O43252 624 aaPredicted RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 PRAMEF12O95522 483 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 LSM8O95777 96 aaKnown RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 OAS1P00973 400 aaKnown RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 PLEKP08567 350 aaPredicted RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 UNGP13051 313 aaPredicted RBP13.87□□□□□ -0.19
GTF3A-209ENST00000640289 TNFAIP3P21580 790 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 ACADSBP45954 432 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 CLEC16AQ2KHT3 1053 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 C2CD6Q53TS8 623 aa13.87□□□□□ -0.19
GTF3A-209ENST00000640289 TDRD12Q587J7 1177 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms