RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ANKRD6Q9Y2G4 727 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 PAXBP1Q9Y5B6 917 aa4.35□□□□□ -1.71
CCDC7-211ENST00000638889 OFD1O75665 1012 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 PRKAR1BP31321 381 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 THBS4P35443 961 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 ZNF91Q05481 1191 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 CTBP1Q13363 440 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 TMEM65Q6PI78 240 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 UBE2Q1Q7Z7E8 422 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 GRAMD1CQ8IYS0 662 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 SPARTQ8N0X7 666 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 OR6B3Q8NGW1 331 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 TMEM171Q8WVE6 324 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 CTHRC1Q96CG8 243 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 P2RX7Q99572 595 aaKnown RBP4.34□□□□□ -1.71
CCDC7-211ENST00000638889 GBA2Q9HCG7 927 aaPredicted RBP4.34□□□□□ -1.71
CCDC7-211ENST00000638889 TRIM36Q9NQ86 728 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 XPNPEP3Q9NQH7 507 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 USP22Q9UPT9 525 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 COL4A3BPQ9Y5P4 624 aa4.34□□□□□ -1.71
CCDC7-211ENST00000638889 BTN3A1O00481 513 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 ALPLP05186 524 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 APEHP13798 732 aaKnown RBP4.33□□□□□ -1.72
CCDC7-211ENST00000638889 EPHA3P29320 983 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 ME1P48163 572 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 COPB1P53618 953 aaKnown RBP4.33□□□□□ -1.72
CCDC7-211ENST00000638889 RPS13P62277 151 aaKnown RBP4.33□□□□□ -1.72
CCDC7-211ENST00000638889 CFHR1Q03591 330 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 TMTC4Q5T4D3 741 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 KRTAP5-11Q6L8G4 156 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 VSTM1Q6UX27 236 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 PIM3Q86V86 326 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 ARFGAP1Q8N6T3 406 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 MPLKIPQ8TAP9 179 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 ZFYVE19Q96K21 471 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 TRMOQ9BU70 441 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 TRIM5Q9C035 493 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 MS4A7Q9GZW8 240 aaPredicted RBP4.33□□□□□ -1.72
CCDC7-211ENST00000638889 HEY2Q9UBP5 337 aa4.33□□□□□ -1.72
CCDC7-211ENST00000638889 TMPRSS11DO60235 418 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 CTSAP10619 480 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 DIO1P49895 249 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 NANOS2P60321 138 aaKnown RBP4.32□□□□□ -1.72
CCDC7-211ENST00000638889 RAB32Q13637 225 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 SEMA3AQ14563 771 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 PTCHD3Q3KNS1 767 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 RANBP10Q6VN20 620 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 DCDC5Q6ZRR9 648 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 ANKRD13BQ86YJ7 626 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 SMRP1Q8NCR6 262 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 VN1R3Q9BXE9 311 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 HOMER2Q9NSB8 354 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 TMEM184CQ9NVA4 438 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.32□□□□□ -1.72
CCDC7-211ENST00000638889 HS3ST3B1Q9Y662 390 aa4.32□□□□□ -1.72
CCDC7-211ENST00000638889 H3BML4 177 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 H3BNX3 289 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 TBC1D4O60343 1298 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 TULP3O75386 442 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 TOMM40O96008 361 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 CRYABP02511 175 aaKnown RBP4.31□□□□□ -1.72
CCDC7-211ENST00000638889 PSG1P11464 419 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 NPR1P16066 1061 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 TIRAPP58753 221 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 HSF1Q00613 529 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 ERV3-1Q14264 604 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 NPY5RQ15761 445 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 LVRNQ6Q4G3 990 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 DAAM2Q86T65 1068 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 DENND1CQ8IV53 801 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.31□□□□□ -1.72
CCDC7-211ENST00000638889 MAFAQ8NHW3 353 aaPredicted RBP4.31□□□□□ -1.72
CCDC7-211ENST00000638889 ZCRB1Q8TBF4 217 aaKnown RBP4.31□□□□□ -1.72
CCDC7-211ENST00000638889 DIS3LQ8TF46 1054 aaKnown RBP4.31□□□□□ -1.72
CCDC7-211ENST00000638889 RAPGEF4Q8WZA2 1011 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 SLC12A5Q9H2X9 1139 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 MGAT4CQ9UBM8 478 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 STAP2Q9UGK3 403 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 CDY1Q9Y6F8 540 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 SQORQ9Y6N5 450 aa4.31□□□□□ -1.72
CCDC7-211ENST00000638889 A0A1W2PPL8 197 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 SPRY2O43597 315 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 PF4V1P10720 104 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 CREB1P16220 341 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 ATF7P17544 494 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-211ENST00000638889 HTR1BP28222 390 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 UQCRC1P31930 480 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 MTHFSP49914 203 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 NEK2P51955 445 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 CFHR3Q02985 330 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 SLC13A2Q13183 592 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 SEC23BQ15437 767 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 INSCQ1MX18 579 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 BRDTQ58F21 947 aaPredicted RBP4.3□□□□□ -1.72
CCDC7-211ENST00000638889 AWAT1Q58HT5 328 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 IFIT1BQ5T764 474 aaKnown RBP4.3□□□□□ -1.72
CCDC7-211ENST00000638889 MPP5Q8N3R9 675 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 NGDNQ8NEJ9 315 aaKnown RBP4.3□□□□□ -1.72
CCDC7-211ENST00000638889 HS6ST2Q96MM7 605 aa4.3□□□□□ -1.72
CCDC7-211ENST00000638889 ZNF518BQ9C0D4 1074 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms